RNA–Protein interactions for RNA: ENST00000409769.6

CLK1-203, Transcript of CDC like kinase 1, humanhuman

TSL 2 BASIC

Gene CLK1, Length 1,192 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-203ENST00000409769 IFT122Q9HBG6 1241 aa5.76□□□□□ -1.49
CLK1-203ENST00000409769 DPP7Q9UHL4 492 aa5.76□□□□□ -1.49
CLK1-203ENST00000409769 SPEF1Q9Y4P9 236 aa5.76□□□□□ -1.49
CLK1-203ENST00000409769 IQGAP3Q86VI3 1631 aa5.76□□□□□ -1.49
CLK1-203ENST00000409769 PZPP20742 1482 aa5.76□□□□□ -1.49
CLK1-203ENST00000409769 COL4A3Q01955 1670 aa5.75□□□□□ -1.49
CLK1-203ENST00000409769 PRR5-ARHGAP8B1AHC4 643 aa5.75□□□□□ -1.49
CLK1-203ENST00000409769 CFBP00751 764 aa5.75□□□□□ -1.49
CLK1-203ENST00000409769 RBP3P10745 1247 aa5.75□□□□□ -1.49
CLK1-203ENST00000409769 AGXTP21549 392 aa5.75□□□□□ -1.49
CLK1-203ENST00000409769 MGAT1P26572 445 aa5.75□□□□□ -1.49
CLK1-203ENST00000409769 CASRP41180 1078 aa5.75□□□□□ -1.49
CLK1-203ENST00000409769 UBE3CQ15386 1083 aa5.75□□□□□ -1.49
CLK1-203ENST00000409769 ADRM1Q16186 407 aa5.75□□□□□ -1.49
CLK1-203ENST00000409769 STRIP1Q5VSL9 837 aa5.75□□□□□ -1.49
CLK1-203ENST00000409769 DRICH1Q6PGQ1 229 aaPredicted RBP5.75□□□□□ -1.49
CLK1-203ENST00000409769 GDF7Q7Z4P5 450 aa5.75□□□□□ -1.49
CLK1-203ENST00000409769 PLXDC1Q8IUK5 500 aa5.75□□□□□ -1.49
CLK1-203ENST00000409769 SUPT20HQ8NEM7 779 aa5.75□□□□□ -1.49
CLK1-203ENST00000409769 GPR150Q8NGU9 434 aa5.75□□□□□ -1.49
CLK1-203ENST00000409769 SNX33Q8WV41 574 aa5.75□□□□□ -1.49
CLK1-203ENST00000409769 QRSL1Q9H0R6 528 aaKnown RBP5.75□□□□□ -1.49
CLK1-203ENST00000409769 PTGFRNQ9P2B2 879 aa5.75□□□□□ -1.49
CLK1-203ENST00000409769 TRHDEQ9UKU6 1024 aa5.75□□□□□ -1.49
CLK1-203ENST00000409769 EDARQ9UNE0 448 aa5.75□□□□□ -1.49
CLK1-203ENST00000409769 ATP10AO60312 1499 aa5.75□□□□□ -1.49
CLK1-203ENST00000409769 FAM135AQ9P2D6 1515 aa5.74□□□□□ -1.49
CLK1-203ENST00000409769 TMEM200CA6NKL6 621 aa5.74□□□□□ -1.49
CLK1-203ENST00000409769 FZD9O00144 591 aa5.74□□□□□ -1.49
CLK1-203ENST00000409769 GABRDO14764 452 aa5.74□□□□□ -1.49
CLK1-203ENST00000409769 PHF2O75151 1096 aa5.74□□□□□ -1.49
CLK1-203ENST00000409769 GASTP01350 101 aa5.74□□□□□ -1.49
CLK1-203ENST00000409769 CTSSP25774 331 aa5.74□□□□□ -1.49
CLK1-203ENST00000409769 BMPR1AP36894 532 aa5.74□□□□□ -1.49
CLK1-203ENST00000409769 BLOC1S1P78537 153 aa5.74□□□□□ -1.49
CLK1-203ENST00000409769 SRSF2Q01130 221 aaKnown RBP5.74□□□□□ -1.49
CLK1-203ENST00000409769 TOR2AQ5JU69 321 aa5.74□□□□□ -1.49
CLK1-203ENST00000409769 ARHGEF19Q8IW93 802 aa5.74□□□□□ -1.49
CLK1-203ENST00000409769 MSL3Q8N5Y2 521 aaKnown RBP5.74□□□□□ -1.49
CLK1-203ENST00000409769 C1orf162Q8NEQ5 155 aaPredicted RBP5.74□□□□□ -1.49
CLK1-203ENST00000409769 TGFBRAP1Q8WUH2 860 aa5.74□□□□□ -1.49
CLK1-203ENST00000409769 LSM14BQ9BX40 385 aaKnown RBP5.74□□□□□ -1.49
CLK1-203ENST00000409769 CPEB1Q9BZB8 566 aaKnown RBP5.74□□□□□ -1.49
CLK1-203ENST00000409769 SLC13A1Q9BZW2 595 aa5.74□□□□□ -1.49
CLK1-203ENST00000409769 GREM2Q9H772 168 aa5.74□□□□□ -1.49
CLK1-203ENST00000409769 HOMER2Q9NSB8 354 aa5.74□□□□□ -1.49
CLK1-203ENST00000409769 DNAJC28Q9NX36 388 aa5.74□□□□□ -1.49
CLK1-203ENST00000409769 GPR45Q9Y5Y3 372 aa5.74□□□□□ -1.49
CLK1-203ENST00000409769 LMTK2Q8IWU2 1503 aa5.74□□□□□ -1.49
CLK1-203ENST00000409769 RPTORQ8N122 1335 aa5.74□□□□□ -1.49
CLK1-203ENST00000409769 TET3O43151 1660 aa5.73□□□□□ -1.49
CLK1-203ENST00000409769 AHRRA9YTQ3 701 aa5.73□□□□□ -1.49
CLK1-203ENST00000409769 B5MCH6 92 aa5.73□□□□□ -1.49
CLK1-203ENST00000409769 SPATA31D3P0C874 917 aa5.73□□□□□ -1.49
CLK1-203ENST00000409769 WASP42768 502 aa5.73□□□□□ -1.49
CLK1-203ENST00000409769 SYCE2Q6PIF2 218 aa5.73□□□□□ -1.49
CLK1-203ENST00000409769 Q6YL49 198 aa5.73□□□□□ -1.49
CLK1-203ENST00000409769 SPATA31D4Q6ZUB0 917 aa5.73□□□□□ -1.49
CLK1-203ENST00000409769 GPRIN1Q7Z2K8 1008 aa5.73□□□□□ -1.49
CLK1-203ENST00000409769 AMOTL1Q8IY63 956 aa5.73□□□□□ -1.49
CLK1-203ENST00000409769 GPR156Q8NFN8 814 aa5.73□□□□□ -1.49
CLK1-203ENST00000409769 ZNF764Q96H86 408 aaPredicted RBP5.73□□□□□ -1.49
CLK1-203ENST00000409769 COQ10AQ96MF6 247 aa5.73□□□□□ -1.49
CLK1-203ENST00000409769 ASPSCR1Q9BZE9 553 aa5.73□□□□□ -1.49
CLK1-203ENST00000409769 TRPM5Q9NZQ8 1165 aa5.73□□□□□ -1.49
CLK1-203ENST00000409769 CEP152O94986 1710 aa5.73□□□□□ -1.49
CLK1-203ENST00000409769 CLSPNQ9HAW4 1339 aa5.73□□□□□ -1.49
CLK1-203ENST00000409769 E9PCH4 1651 aa5.72□□□□□ -1.49
CLK1-203ENST00000409769 ZC3H13Q5T200 1668 aaKnown RBP5.72□□□□□ -1.49
CLK1-203ENST00000409769 hCG_2014768A0A024R1R8 64 aa5.72□□□□□ -1.49
CLK1-203ENST00000409769 CENPVL1A0A0U1RR11 272 aa5.72□□□□□ -1.49
CLK1-203ENST00000409769 SHTN1A0MZ66 631 aa5.72□□□□□ -1.49
CLK1-203ENST00000409769 KATNA1O75449 491 aa5.72□□□□□ -1.49
CLK1-203ENST00000409769 HLA-DOAP06340 250 aa5.72□□□□□ -1.49
CLK1-203ENST00000409769 APOBEC3AP31941 199 aaPredicted RBP5.72□□□□□ -1.49
CLK1-203ENST00000409769 CRHR1P34998 444 aa5.72□□□□□ -1.49
CLK1-203ENST00000409769 ZEB1P37275 1124 aaPredicted RBP5.72□□□□□ -1.49
CLK1-203ENST00000409769 EVA1CP58658 441 aa5.72□□□□□ -1.49
CLK1-203ENST00000409769 MRPS21P82921 87 aaKnown RBP5.72□□□□□ -1.49
CLK1-203ENST00000409769 EXOSC10Q01780 885 aaKnown RBP5.72□□□□□ -1.49
CLK1-203ENST00000409769 ITKQ08881 620 aa5.72□□□□□ -1.49
CLK1-203ENST00000409769 MALLQ13021 153 aa5.72□□□□□ -1.49
CLK1-203ENST00000409769 MST1LQ2TV78 715 aa5.72□□□□□ -1.49
CLK1-203ENST00000409769 MUM1L1Q5H9M0 696 aa5.72□□□□□ -1.49
CLK1-203ENST00000409769 ARMC6Q6NXE6 501 aa5.72□□□□□ -1.49
CLK1-203ENST00000409769 FAM180AQ6UWF9 173 aa5.72□□□□□ -1.49
CLK1-203ENST00000409769 OLFML1Q6UWY5 402 aa5.72□□□□□ -1.49
CLK1-203ENST00000409769 ABHD15Q6UXT9 468 aa5.72□□□□□ -1.49
CLK1-203ENST00000409769 LCORLQ8N3X6 602 aa5.72□□□□□ -1.49
CLK1-203ENST00000409769 LILRA3Q8N6C8 439 aaPredicted RBP5.72□□□□□ -1.49
CLK1-203ENST00000409769 FAXDC2Q96IV6 333 aa5.72□□□□□ -1.49
CLK1-203ENST00000409769 ACE2Q9BYF1 805 aaPredicted RBP5.72□□□□□ -1.49
CLK1-203ENST00000409769 SERHL2Q9H4I8 314 aa5.72□□□□□ -1.49
CLK1-203ENST00000409769 AKIP1Q9NQ31 210 aa5.72□□□□□ -1.49
CLK1-203ENST00000409769 TNFRSF18Q9Y5U5 241 aa5.72□□□□□ -1.49
CLK1-203ENST00000409769 NUP155O75694 1391 aa5.71□□□□□ -1.5
CLK1-203ENST00000409769 ABCC3O15438 1527 aa5.71□□□□□ -1.5
CLK1-203ENST00000409769 ZFP36P26651 326 aaKnown RBP5.71□□□□□ -1.5
CLK1-203ENST00000409769 CD38P28907 300 aa5.71□□□□□ -1.5
CLK1-203ENST00000409769 IARSP41252 1262 aaKnown RBP5.71□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms