RNA–Protein interactions for RNA: ENST00000409403.6

CLK1-202, Transcript of CDC like kinase 1, humanhuman

TSL 5

Gene CLK1, Length 1,664 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-202ENST00000409403 GLIS2Q9BZE0 524 aaPredicted RBP6.04□□□□□ -1.44
CLK1-202ENST00000409403 PUS7LQ9H0K6 701 aaKnown RBP6.04□□□□□ -1.44
CLK1-202ENST00000409403 RC3H2Q9HBD1 1191 aaKnown RBP6.04□□□□□ -1.44
CLK1-202ENST00000409403 STAP2Q9UGK3 403 aa6.04□□□□□ -1.44
CLK1-202ENST00000409403 PALD1Q9ULE6 856 aa6.04□□□□□ -1.44
CLK1-202ENST00000409403 ODF2LQ9ULJ1 636 aa6.04□□□□□ -1.44
CLK1-202ENST00000409403 CYP46A1Q9Y6A2 500 aa6.04□□□□□ -1.44
CLK1-202ENST00000409403 FAM169AQ9Y6X4 670 aa6.04□□□□□ -1.44
CLK1-202ENST00000409403 ZNF831Q5JPB2 1677 aa6.04□□□□□ -1.44
CLK1-202ENST00000409403 GOLGA6L7A0A1B0GV03 622 aa6.04□□□□□ -1.44
CLK1-202ENST00000409403 A0A1W2PPC1 479 aa6.04□□□□□ -1.44
CLK1-202ENST00000409403 KCNK3O14649 394 aa6.04□□□□□ -1.44
CLK1-202ENST00000409403 HIP1RO75146 1068 aa6.04□□□□□ -1.44
CLK1-202ENST00000409403 NBPF7P0C2Y1 421 aaPredicted RBP6.04□□□□□ -1.44
CLK1-202ENST00000409403 SETSIPP0DME0 302 aa6.04□□□□□ -1.44
CLK1-202ENST00000409403 ZBTB48P10074 688 aaPredicted RBP6.04□□□□□ -1.44
CLK1-202ENST00000409403 HMGB2P26583 209 aaKnown RBP6.04□□□□□ -1.44
CLK1-202ENST00000409403 PSMA5P28066 241 aa6.04□□□□□ -1.44
CLK1-202ENST00000409403 AK2P54819 239 aa6.04□□□□□ -1.44
CLK1-202ENST00000409403 MTMR1Q13613 665 aa6.04□□□□□ -1.44
CLK1-202ENST00000409403 DCTN1Q14203 1278 aa6.04□□□□□ -1.44
CLK1-202ENST00000409403 ZNF174Q15697 407 aa6.04□□□□□ -1.44
CLK1-202ENST00000409403 IQSEC1Q6DN90 963 aa6.04□□□□□ -1.44
CLK1-202ENST00000409403 TRIM65Q6PJ69 517 aa6.04□□□□□ -1.44
CLK1-202ENST00000409403 TMC6Q7Z403 805 aa6.04□□□□□ -1.44
CLK1-202ENST00000409403 YTHDF3Q7Z739 585 aaKnown RBP6.04□□□□□ -1.44
CLK1-202ENST00000409403 TAX1BP1Q86VP1 789 aa6.04□□□□□ -1.44
CLK1-202ENST00000409403 IQCA1Q86XH1 822 aa6.04□□□□□ -1.44
CLK1-202ENST00000409403 C2CD5Q86YS7 1000 aa6.04□□□□□ -1.44
CLK1-202ENST00000409403 NOSTRINQ8IVI9 506 aa6.04□□□□□ -1.44
CLK1-202ENST00000409403 TCP11Q8WWU5 503 aa6.04□□□□□ -1.44
CLK1-202ENST00000409403 SEC14L1Q92503 715 aa6.04□□□□□ -1.44
CLK1-202ENST00000409403 FAXDC2Q96IV6 333 aa6.04□□□□□ -1.44
CLK1-202ENST00000409403 LRRCC1Q9C099 1032 aa6.04□□□□□ -1.44
CLK1-202ENST00000409403 AP5M1Q9H0R1 490 aa6.04□□□□□ -1.44
CLK1-202ENST00000409403 SMOC1Q9H4F8 434 aa6.04□□□□□ -1.44
CLK1-202ENST00000409403 BICC1Q9H694 974 aaKnown RBP6.04□□□□□ -1.44
CLK1-202ENST00000409403 FAM204AQ9H8W3 233 aa6.04□□□□□ -1.44
CLK1-202ENST00000409403 TNFRSF12AQ9NP84 129 aa6.04□□□□□ -1.44
CLK1-202ENST00000409403 HOMER3Q9NSC5 361 aa6.04□□□□□ -1.44
CLK1-202ENST00000409403 H2AFY2Q9P0M6 372 aaPredicted RBP6.04□□□□□ -1.44
CLK1-202ENST00000409403 L1RE1Q9UN81 338 aa6.04□□□□□ -1.44
CLK1-202ENST00000409403 COL4A5P29400 1685 aa6.03□□□□□ -1.44
CLK1-202ENST00000409403 POLR2AP24928 1970 aaKnown RBP6.03□□□□□ -1.44
CLK1-202ENST00000409403 BTBD11A6QL63 1104 aa6.03□□□□□ -1.44
CLK1-202ENST00000409403 ULK1O75385 1050 aa6.03□□□□□ -1.44
CLK1-202ENST00000409403 SCP2P22307 547 aa6.03□□□□□ -1.44
CLK1-202ENST00000409403 RFC4P35249 363 aa6.03□□□□□ -1.44
CLK1-202ENST00000409403 PRPHP41219 470 aa6.03□□□□□ -1.44
CLK1-202ENST00000409403 IFFO1Q0D2I5 559 aa6.03□□□□□ -1.44
CLK1-202ENST00000409403 PPFIA1Q13136 1202 aa6.03□□□□□ -1.44
CLK1-202ENST00000409403 LRP8Q14114 963 aa6.03□□□□□ -1.44
CLK1-202ENST00000409403 TWISTNBQ3B726 338 aaPredicted RBP6.03□□□□□ -1.44
CLK1-202ENST00000409403 FILIP1LQ4L180 1135 aa6.03□□□□□ -1.44
CLK1-202ENST00000409403 WLSQ5T9L3 541 aa6.03□□□□□ -1.44
CLK1-202ENST00000409403 KCTD1Q719H9 257 aa6.03□□□□□ -1.44
CLK1-202ENST00000409403 RUFY3Q7L099 469 aa6.03□□□□□ -1.44
CLK1-202ENST00000409403 CCDC83Q8IWF9 413 aa6.03□□□□□ -1.44
CLK1-202ENST00000409403 DHX40Q8IX18 779 aaKnown RBP6.03□□□□□ -1.44
CLK1-202ENST00000409403 FAM76AQ8TAV0 307 aa6.03□□□□□ -1.44
CLK1-202ENST00000409403 PHOSPHO1Q8TCT1 267 aa6.03□□□□□ -1.44
CLK1-202ENST00000409403 COG1Q8WTW3 980 aa6.03□□□□□ -1.44
CLK1-202ENST00000409403 MTMR8Q96EF0 704 aa6.03□□□□□ -1.44
CLK1-202ENST00000409403 JPH2Q9BR39 696 aaPredicted RBP6.03□□□□□ -1.44
CLK1-202ENST00000409403 STK31Q9BXU1 1019 aa6.03□□□□□ -1.44
CLK1-202ENST00000409403 CD244Q9BZW8 370 aa6.03□□□□□ -1.44
CLK1-202ENST00000409403 NUDT5Q9UKK9 219 aa6.03□□□□□ -1.44
CLK1-202ENST00000409403 ZNF652Q9Y2D9 606 aa6.03□□□□□ -1.44
CLK1-202ENST00000409403 SNX14Q9Y5W7 946 aa6.03□□□□□ -1.44
CLK1-202ENST00000409403 ATP23Q9Y6H3 246 aa6.03□□□□□ -1.44
CLK1-202ENST00000409403 EVC2Q86UK5 1308 aa6.03□□□□□ -1.44
CLK1-202ENST00000409403 KDM3BQ7LBC6 1761 aa6.03□□□□□ -1.44
CLK1-202ENST00000409403 IKBKBO14920 756 aa6.02□□□□□ -1.45
CLK1-202ENST00000409403 CLASP2O75122 1294 aaKnown RBP6.02□□□□□ -1.45
CLK1-202ENST00000409403 CYBBP04839 570 aa6.02□□□□□ -1.45
CLK1-202ENST00000409403 GNAI3P08754 354 aa6.02□□□□□ -1.45
CLK1-202ENST00000409403 DBHP09172 617 aa6.02□□□□□ -1.45
CLK1-202ENST00000409403 ZKSCAN1P17029 563 aaPredicted RBP6.02□□□□□ -1.45
CLK1-202ENST00000409403 EPS15P42566 896 aa6.02□□□□□ -1.45
CLK1-202ENST00000409403 AMPHP49418 695 aa6.02□□□□□ -1.45
CLK1-202ENST00000409403 GALK1P51570 392 aa6.02□□□□□ -1.45
CLK1-202ENST00000409403 CLNS1AP54105 237 aaKnown RBP6.02□□□□□ -1.45
CLK1-202ENST00000409403 GNG11P61952 73 aa6.02□□□□□ -1.45
CLK1-202ENST00000409403 ITKQ08881 620 aa6.02□□□□□ -1.45
CLK1-202ENST00000409403 GRIK3Q13003 919 aa6.02□□□□□ -1.45
CLK1-202ENST00000409403 CASP8Q14790 479 aa6.02□□□□□ -1.45
CLK1-202ENST00000409403 WHAMMP3Q1A5X7 153 aa6.02□□□□□ -1.45
CLK1-202ENST00000409403 RGMBQ6NW40 437 aa6.02□□□□□ -1.45
CLK1-202ENST00000409403 ARMCX5Q6P1M9 558 aa6.02□□□□□ -1.45
CLK1-202ENST00000409403 KCNV1Q6PIU1 500 aa6.02□□□□□ -1.45
CLK1-202ENST00000409403 DLK2Q6UY11 383 aa6.02□□□□□ -1.45
CLK1-202ENST00000409403 PASD1Q8IV76 773 aa6.02□□□□□ -1.45
CLK1-202ENST00000409403 AOPEPQ8N6M6 819 aa6.02□□□□□ -1.45
CLK1-202ENST00000409403 CNTD1Q8N815 330 aa6.02□□□□□ -1.45
CLK1-202ENST00000409403 KIAA1958Q8N8K9 716 aa6.02□□□□□ -1.45
CLK1-202ENST00000409403 ABHD4Q8TB40 342 aa6.02□□□□□ -1.45
CLK1-202ENST00000409403 OTUD7AQ8TE49 926 aaPredicted RBP6.02□□□□□ -1.45
CLK1-202ENST00000409403 JDP2Q8WYK2 163 aa6.02□□□□□ -1.45
CLK1-202ENST00000409403 KAT2BQ92831 832 aa6.02□□□□□ -1.45
CLK1-202ENST00000409403 RILPL2Q969X0 211 aa6.02□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms