RNA–Protein interactions for RNA: ENST00000409129.2

NIF3L1-203, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 5

Gene NIF3L1, Length 813 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-203ENST00000409129 C4orf32Q8N8J7 132 aa10.09□□□□□ -0.79
NIF3L1-203ENST00000409129 KIFAP3Q92845 792 aa10.09□□□□□ -0.79
NIF3L1-203ENST00000409129 LLPHQ9BRT6 129 aaKnown RBP10.09□□□□□ -0.79
NIF3L1-203ENST00000409129 SLC2A4RGQ9NR83 387 aa10.09□□□□□ -0.79
NIF3L1-203ENST00000409129 SH2B1Q9NRF2 756 aaPredicted RBP10.09□□□□□ -0.79
NIF3L1-203ENST00000409129 LIMCH1Q9UPQ0 1083 aa10.09□□□□□ -0.79
NIF3L1-203ENST00000409129 GDAQ9Y2T3 454 aa10.09□□□□□ -0.79
NIF3L1-203ENST00000409129 NUMBLQ9Y6R0 609 aa10.09□□□□□ -0.79
NIF3L1-203ENST00000409129 WDFY3Q8IZQ1 3526 aa10.09□□□□□ -0.79
NIF3L1-203ENST00000409129 SDK1Q7Z5N4 2213 aa10.09□□□□□ -0.79
NIF3L1-203ENST00000409129 K7ERI5 159 aa10.08□□□□□ -0.8
NIF3L1-203ENST00000409129 CCL16O15467 120 aa10.08□□□□□ -0.8
NIF3L1-203ENST00000409129 XYLBO75191 536 aa10.08□□□□□ -0.8
NIF3L1-203ENST00000409129 CENPBP07199 599 aaPredicted RBP10.08□□□□□ -0.8
NIF3L1-203ENST00000409129 C8AP07357 584 aa10.08□□□□□ -0.8
NIF3L1-203ENST00000409129 FGFR3P22607 806 aa10.08□□□□□ -0.8
NIF3L1-203ENST00000409129 HOXA9P31269 272 aa10.08□□□□□ -0.8
NIF3L1-203ENST00000409129 OR1D2P34982 312 aa10.08□□□□□ -0.8
NIF3L1-203ENST00000409129 TRAPPC10P48553 1259 aa10.08□□□□□ -0.8
NIF3L1-203ENST00000409129 NTHL1P78549 312 aa10.08□□□□□ -0.8
NIF3L1-203ENST00000409129 RAB33AQ14088 237 aa10.08□□□□□ -0.8
NIF3L1-203ENST00000409129 PDIA5Q14554 519 aa10.08□□□□□ -0.8
NIF3L1-203ENST00000409129 UVSSAQ2YD98 709 aa10.08□□□□□ -0.8
NIF3L1-203ENST00000409129 TTC38Q5R3I4 469 aa10.08□□□□□ -0.8
NIF3L1-203ENST00000409129 AXDND1Q5T1B0 1012 aaPredicted RBP10.08□□□□□ -0.8
NIF3L1-203ENST00000409129 ATF7IP2Q5U623 682 aa10.08□□□□□ -0.8
NIF3L1-203ENST00000409129 HAUS3Q68CZ6 603 aa10.08□□□□□ -0.8
NIF3L1-203ENST00000409129 PARM1Q6UWI2 310 aa10.08□□□□□ -0.8
NIF3L1-203ENST00000409129 PDZRN4Q6ZMN7 1036 aaPredicted RBP10.08□□□□□ -0.8
NIF3L1-203ENST00000409129 APBB1IPQ7Z5R6 666 aaPredicted RBP10.08□□□□□ -0.8
NIF3L1-203ENST00000409129 CCDC83Q8IWF9 413 aa10.08□□□□□ -0.8
NIF3L1-203ENST00000409129 FBXO18Q8NFZ0 1043 aa10.08□□□□□ -0.8
NIF3L1-203ENST00000409129 FGF14Q92915 247 aa10.08□□□□□ -0.8
NIF3L1-203ENST00000409129 PPP1R10Q96QC0 940 aaKnown RBP10.08□□□□□ -0.8
NIF3L1-203ENST00000409129 RTKNQ9BST9 563 aa10.08□□□□□ -0.8
NIF3L1-203ENST00000409129 RPP25Q9BUL9 199 aaKnown RBP10.08□□□□□ -0.8
NIF3L1-203ENST00000409129 KIFC3Q9BVG8 833 aa10.08□□□□□ -0.8
NIF3L1-203ENST00000409129 BHMT2Q9H2M3 363 aa10.08□□□□□ -0.8
NIF3L1-203ENST00000409129 ARHGEF3Q9NR81 526 aa10.08□□□□□ -0.8
NIF3L1-203ENST00000409129 LRWD1Q9UFC0 647 aa10.08□□□□□ -0.8
NIF3L1-203ENST00000409129 CDH7Q9ULB5 785 aa10.08□□□□□ -0.8
NIF3L1-203ENST00000409129 SMG5Q9UPR3 1016 aaKnown RBP10.08□□□□□ -0.8
NIF3L1-203ENST00000409129 KIAA1024Q9UPX6 916 aa10.08□□□□□ -0.8
NIF3L1-203ENST00000409129 SIT1Q9Y3P8 196 aa10.08□□□□□ -0.8
NIF3L1-203ENST00000409129 DYNC1LI1Q9Y6G9 523 aaKnown RBP10.08□□□□□ -0.8
NIF3L1-203ENST00000409129 GREB1Q4ZG55 1949 aa10.07□□□□□ -0.8
NIF3L1-203ENST00000409129 TMEM189-UBE2V1I3L0A0 370 aa10.07□□□□□ -0.8
NIF3L1-203ENST00000409129 B3GAT3O94766 335 aa10.07□□□□□ -0.8
NIF3L1-203ENST00000409129 POU2F2P09086 479 aa10.07□□□□□ -0.8
NIF3L1-203ENST00000409129 IGFBP6P24592 240 aaPredicted RBP10.07□□□□□ -0.8
NIF3L1-203ENST00000409129 CLCNKBP51801 687 aa10.07□□□□□ -0.8
NIF3L1-203ENST00000409129 STARD6P59095 220 aa10.07□□□□□ -0.8
NIF3L1-203ENST00000409129 GPC5P78333 572 aa10.07□□□□□ -0.8
NIF3L1-203ENST00000409129 HMGN5P82970 282 aaKnown RBP10.07□□□□□ -0.8
NIF3L1-203ENST00000409129 LMNB2Q03252 620 aa10.07□□□□□ -0.8
NIF3L1-203ENST00000409129 GNL2Q13823 731 aaKnown RBP10.07□□□□□ -0.8
NIF3L1-203ENST00000409129 UPP1Q16831 310 aa10.07□□□□□ -0.8
NIF3L1-203ENST00000409129 GLRA4Q5JXX5 417 aa10.07□□□□□ -0.8
NIF3L1-203ENST00000409129 CD300LGQ6UXG3 332 aa10.07□□□□□ -0.8
NIF3L1-203ENST00000409129 RSPO2Q6UXX9 243 aaPredicted RBP10.07□□□□□ -0.8
NIF3L1-203ENST00000409129 MTSS1LQ765P7 747 aa10.07□□□□□ -0.8
NIF3L1-203ENST00000409129 RTL10Q7L3V2 364 aa10.07□□□□□ -0.8
NIF3L1-203ENST00000409129 ITFG1Q8TB96 612 aa10.07□□□□□ -0.8
NIF3L1-203ENST00000409129 SLC7A14Q8TBB6 771 aa10.07□□□□□ -0.8
NIF3L1-203ENST00000409129 FGF13Q92913 245 aa10.07□□□□□ -0.8
NIF3L1-203ENST00000409129 UROC1Q96N76 676 aa10.07□□□□□ -0.8
NIF3L1-203ENST00000409129 DDX19AQ9NUU7 478 aaKnown RBP10.07□□□□□ -0.8
NIF3L1-203ENST00000409129 MTRRQ9UBK8 725 aa10.07□□□□□ -0.8
NIF3L1-203ENST00000409129 NOL7Q9UMY1 257 aaKnown RBP10.07□□□□□ -0.8
NIF3L1-203ENST00000409129 POLIQ9UNA4 740 aa10.07□□□□□ -0.8
NIF3L1-203ENST00000409129 TNFSF13BQ9Y275 285 aa10.07□□□□□ -0.8
NIF3L1-203ENST00000409129 GCN1Q92616 2671 aaKnown RBP10.07□□□□□ -0.8
NIF3L1-203ENST00000409129 NBEAQ8NFP9 2946 aa10.06□□□□□ -0.8
NIF3L1-203ENST00000409129 SMIM28A0A1B0GU29 152 aa10.06□□□□□ -0.8
NIF3L1-203ENST00000409129 CCDC169A6NNP5 214 aa10.06□□□□□ -0.8
NIF3L1-203ENST00000409129 PRR5-ARHGAP8B1AHC4 643 aa10.06□□□□□ -0.8
NIF3L1-203ENST00000409129 TRAPPC3O43617 180 aa10.06□□□□□ -0.8
NIF3L1-203ENST00000409129 SDHBP21912 280 aa10.06□□□□□ -0.8
NIF3L1-203ENST00000409129 TKTP29401 623 aaKnown RBP10.06□□□□□ -0.8
NIF3L1-203ENST00000409129 GRM5P41594 1212 aa10.06□□□□□ -0.8
NIF3L1-203ENST00000409129 MLLT3P42568 568 aaPredicted RBP10.06□□□□□ -0.8
NIF3L1-203ENST00000409129 YARSP54577 528 aaKnown RBP10.06□□□□□ -0.8
NIF3L1-203ENST00000409129 ARHGAP8P85298 464 aa10.06□□□□□ -0.8
NIF3L1-203ENST00000409129 LPAL2Q16609 132 aa10.06□□□□□ -0.8
NIF3L1-203ENST00000409129 XKR4Q5GH76 650 aa10.06□□□□□ -0.8
NIF3L1-203ENST00000409129 TSSK4Q6SA08 328 aa10.06□□□□□ -0.8
NIF3L1-203ENST00000409129 ALKAL1Q6UXT8 129 aa10.06□□□□□ -0.8
NIF3L1-203ENST00000409129 ANKS3Q6ZW76 656 aa10.06□□□□□ -0.8
NIF3L1-203ENST00000409129 IGSF22Q8N9C0 903 aa10.06□□□□□ -0.8
NIF3L1-203ENST00000409129 FAM184AQ8NB25 1140 aa10.06□□□□□ -0.8
NIF3L1-203ENST00000409129 PJA1Q8NG27 643 aa10.06□□□□□ -0.8
NIF3L1-203ENST00000409129 SHDQ96IW2 340 aa10.06□□□□□ -0.8
NIF3L1-203ENST00000409129 ZSCAN31Q96LW9 406 aaPredicted RBP10.06□□□□□ -0.8
NIF3L1-203ENST00000409129 ACO2Q99798 780 aaKnown RBP10.06□□□□□ -0.8
NIF3L1-203ENST00000409129 TMEM134Q9H6X4 195 aa10.06□□□□□ -0.8
NIF3L1-203ENST00000409129 GOLGA2P5Q9HBQ8 144 aa10.06□□□□□ -0.8
NIF3L1-203ENST00000409129 PTPRHQ9HD43 1115 aa10.06□□□□□ -0.8
NIF3L1-203ENST00000409129 HCFC1R1Q9NWW0 138 aa10.06□□□□□ -0.8
NIF3L1-203ENST00000409129 DNMT3BQ9UBC3 853 aaKnown RBP10.06□□□□□ -0.8
NIF3L1-203ENST00000409129 KCNH3Q9ULD8 1083 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms