RNA–Protein interactions for RNA: ENST00000400337.6

COL18A1-204, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL18A1, Length 5,436 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-204ENST00000400337 SPATA2LQ8IUW3 424 aaPredicted RBP19.17■□□□□ 0.66
COL18A1-204ENST00000400337 GOLPH3Q9H4A6 298 aa19.17■□□□□ 0.66
COL18A1-204ENST00000400337 SUDS3Q9H7L9 328 aaPredicted RBP19.17■□□□□ 0.66
COL18A1-204ENST00000400337 FAM8A1Q9UBU6 413 aa19.17■□□□□ 0.66
COL18A1-204ENST00000400337 TMEM253P0C7T8 217 aa19.17■□□□□ 0.66
COL18A1-204ENST00000400337 RALAP11233 206 aa19.17■□□□□ 0.66
COL18A1-204ENST00000400337 CYP2B6P20813 491 aa19.17■□□□□ 0.66
COL18A1-204ENST00000400337 TOB1P50616 345 aaPredicted RBP19.17■□□□□ 0.66
COL18A1-204ENST00000400337 XRRA1Q6P2D8 792 aa19.17■□□□□ 0.66
COL18A1-204ENST00000400337 SH2D3CQ8N5H7 860 aa19.17■□□□□ 0.66
COL18A1-204ENST00000400337 AGAP3Q96P47 875 aa19.17■□□□□ 0.66
COL18A1-204ENST00000400337 RBM15Q96T37 977 aaKnown RBP eCLIP19.17■□□□□ 0.664e-10■■■■□ 26.2
COL18A1-204ENST00000400337 MOSPD1Q9UJG1 213 aa19.17■□□□□ 0.66
COL18A1-204ENST00000400337 UBA6A0AVT1 1052 aaPredicted RBP19.17■□□□□ 0.66
COL18A1-204ENST00000400337 GOLGA8RI6L899 631 aa19.17■□□□□ 0.66
COL18A1-204ENST00000400337 NEMP1O14524 444 aa19.17■□□□□ 0.66
COL18A1-204ENST00000400337 MAGEA9P43362 315 aa19.17■□□□□ 0.66
COL18A1-204ENST00000400337 PIGHQ14442 188 aaPredicted RBP19.17■□□□□ 0.66
COL18A1-204ENST00000400337 CCNI2Q6ZMN8 369 aaPredicted RBP19.17■□□□□ 0.66
COL18A1-204ENST00000400337 ADGRA1Q86SQ6 560 aa19.17■□□□□ 0.66
COL18A1-204ENST00000400337 FAM118BQ9BPY3 351 aa19.17■□□□□ 0.66
COL18A1-204ENST00000400337 FAM49BQ9NUQ9 324 aa19.17■□□□□ 0.66
COL18A1-204ENST00000400337 AGLP35573 1532 aa19.17■□□□□ 0.66
COL18A1-204ENST00000400337 RPS12P25398 132 aaKnown RBP19.17■□□□□ 0.66
COL18A1-204ENST00000400337 ZNF235Q14590 738 aa19.17■□□□□ 0.66
COL18A1-204ENST00000400337 AGPAT3Q9NRZ7 376 aa19.17■□□□□ 0.66
COL18A1-204ENST00000400337 CHORDC1Q9UHD1 332 aaPredicted RBP19.17■□□□□ 0.66
COL18A1-204ENST00000400337 ICAM1P05362 532 aa19.16■□□□□ 0.66
COL18A1-204ENST00000400337 CD44P16070 742 aaKnown RBP19.16■□□□□ 0.66
COL18A1-204ENST00000400337 ACCSLQ4AC99 568 aa19.16■□□□□ 0.66
COL18A1-204ENST00000400337 GIPC2Q8TF65 315 aa19.16■□□□□ 0.66
COL18A1-204ENST00000400337 ZKSCAN4Q969J2 545 aaPredicted RBP19.16■□□□□ 0.66
COL18A1-204ENST00000400337 C9orf72Q96LT7 481 aa19.16■□□□□ 0.66
COL18A1-204ENST00000400337 PARK7Q99497 189 aaKnown RBP19.16■□□□□ 0.66
COL18A1-204ENST00000400337 IRAK4Q9NWZ3 460 aa19.16■□□□□ 0.66
COL18A1-204ENST00000400337 TRIM33Q9UPN9 1127 aa19.16■□□□□ 0.66
COL18A1-204ENST00000400337 ALG6Q9Y672 507 aa19.16■□□□□ 0.66
COL18A1-204ENST00000400337 HSPA9P38646 679 aaKnown RBP19.16■□□□□ 0.66
COL18A1-204ENST00000400337 MORF4L2Q15014 288 aa19.16■□□□□ 0.66
COL18A1-204ENST00000400337 E2F4Q16254 413 aa19.16■□□□□ 0.66
COL18A1-204ENST00000400337 FASTKD1Q53R41 847 aaKnown RBP19.16■□□□□ 0.66
COL18A1-204ENST00000400337 ULK4Q96C45 1275 aa19.16■□□□□ 0.66
COL18A1-204ENST00000400337 ASIC4Q96FT7 647 aa19.16■□□□□ 0.66
COL18A1-204ENST00000400337 NOP53Q9NZM5 478 aaKnown RBP19.16■□□□□ 0.66
COL18A1-204ENST00000400337 MED24O75448 989 aa19.16■□□□□ 0.66
COL18A1-204ENST00000400337 LARP7Q4G0J3 582 aaKnown RBP eCLIP19.16■□□□□ 0.66
COL18A1-204ENST00000400337 SCFD2Q8WU76 684 aa19.16■□□□□ 0.66
COL18A1-204ENST00000400337 RAB6BQ9NRW1 208 aa19.16■□□□□ 0.66
COL18A1-204ENST00000400337 ERAP1Q9NZ08 941 aa19.16■□□□□ 0.66
COL18A1-204ENST00000400337 PPFIA2O75334 1257 aa19.16■□□□□ 0.66
COL18A1-204ENST00000400337 SNRPFP62306 86 aaKnown RBP19.16■□□□□ 0.66
COL18A1-204ENST00000400337 IER5Q5VY09 327 aa19.16■□□□□ 0.66
COL18A1-204ENST00000400337 RMDN1Q96DB5 314 aa19.16■□□□□ 0.66
COL18A1-204ENST00000400337 TSPYL2Q9H2G4 693 aaPredicted RBP19.16■□□□□ 0.66
COL18A1-204ENST00000400337 TRABDQ9H4I3 376 aa19.16■□□□□ 0.66
COL18A1-204ENST00000400337 MAP3K20Q9NYL2 800 aaKnown RBP19.16■□□□□ 0.66
COL18A1-204ENST00000400337 TJP2Q9UDY2 1190 aa19.16■□□□□ 0.66
COL18A1-204ENST00000400337 RSPH10B2B2RC85 870 aa19.15■□□□□ 0.66
COL18A1-204ENST00000400337 DPYSL4O14531 572 aa19.15■□□□□ 0.66
COL18A1-204ENST00000400337 P4HA2O15460 535 aa19.15■□□□□ 0.66
COL18A1-204ENST00000400337 RSPH10BP0C881 870 aa19.15■□□□□ 0.66
COL18A1-204ENST00000400337 CAP2P40123 477 aa19.15■□□□□ 0.66
COL18A1-204ENST00000400337 NNMTP40261 264 aa19.15■□□□□ 0.66
COL18A1-204ENST00000400337 BYSLQ13895 437 aaKnown RBP19.15■□□□□ 0.66
COL18A1-204ENST00000400337 C1orf146Q5VVC0 180 aa19.15■□□□□ 0.66
COL18A1-204ENST00000400337 RAET1EQ8TD07 263 aa19.15■□□□□ 0.66
COL18A1-204ENST00000400337 RTFDC1Q9BY42 306 aaPredicted RBP19.15■□□□□ 0.66
COL18A1-204ENST00000400337 TSR3Q9UJK0 312 aaKnown RBP19.15■□□□□ 0.66
COL18A1-204ENST00000400337 RAD51CO43502 376 aa19.15■□□□□ 0.66
COL18A1-204ENST00000400337 IL18RAPO95256 599 aa19.15■□□□□ 0.66
COL18A1-204ENST00000400337 ITIH2P19823 946 aa19.15■□□□□ 0.66
COL18A1-204ENST00000400337 CYP2C19P33261 490 aa19.15■□□□□ 0.66
COL18A1-204ENST00000400337 SLC15A2Q16348 729 aa19.15■□□□□ 0.66
COL18A1-204ENST00000400337 GPAT2Q6NUI2 795 aa19.15■□□□□ 0.66
COL18A1-204ENST00000400337 ANKS1AQ92625 1134 aa19.15■□□□□ 0.66
COL18A1-204ENST00000400337 NCLNQ969V3 563 aa19.15■□□□□ 0.66
COL18A1-204ENST00000400337 NT5C1AQ9BXI3 368 aa19.15■□□□□ 0.66
COL18A1-204ENST00000400337 ETNK1Q9HBU6 452 aa19.15■□□□□ 0.66
COL18A1-204ENST00000400337 ANLNQ9NQW6 1124 aa19.15■□□□□ 0.66
COL18A1-204ENST00000400337 TBX20Q9UMR3 447 aa19.15■□□□□ 0.66
COL18A1-204ENST00000400337 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP19.15■□□□□ 0.667e-7■■■■■ 73.8
COL18A1-204ENST00000400337 KATNAL1Q9BW62 490 aa19.15■□□□□ 0.66
COL18A1-204ENST00000400337 TRIM15Q9C019 465 aa19.15■□□□□ 0.66
COL18A1-204ENST00000400337 PRMT7Q9NVM4 692 aaPredicted RBP19.15■□□□□ 0.66
COL18A1-204ENST00000400337 L3MBTL1Q9Y468 752 aa19.15■□□□□ 0.66
COL18A1-204ENST00000400337 TRAPPC3O43617 180 aa19.15■□□□□ 0.66
COL18A1-204ENST00000400337 HBP1O60381 514 aa19.15■□□□□ 0.66
COL18A1-204ENST00000400337 GTF2H1P32780 548 aa19.15■□□□□ 0.66
COL18A1-204ENST00000400337 SEC23AQ15436 765 aa19.15■□□□□ 0.66
COL18A1-204ENST00000400337 GPRASP2Q96D09 838 aa19.15■□□□□ 0.66
COL18A1-204ENST00000400337 OSBPL8Q9BZF1 889 aa19.15■□□□□ 0.66
COL18A1-204ENST00000400337 PLEKP08567 350 aaPredicted RBP19.15■□□□□ 0.66
COL18A1-204ENST00000400337 STMN1P16949 149 aa19.15■□□□□ 0.66
COL18A1-204ENST00000400337 VEPH1Q14D04 833 aa19.15■□□□□ 0.66
COL18A1-204ENST00000400337 TAS2R42Q7RTR8 314 aa19.15■□□□□ 0.66
COL18A1-204ENST00000400337 TRAPPC11Q7Z392 1133 aa19.15■□□□□ 0.66
COL18A1-204ENST00000400337 CDR2LQ86X02 465 aaPredicted RBP19.15■□□□□ 0.66
COL18A1-204ENST00000400337 RNF217Q8TC41 542 aa19.15■□□□□ 0.66
COL18A1-204ENST00000400337 AGR3Q8TD06 166 aa19.15■□□□□ 0.66
COL18A1-204ENST00000400337 MED15Q96RN5 788 aa19.15■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms