RNA–Protein interactions for RNA: ENST00000399002.6

SPTLC3-201, Transcript of serine palmitoyltransferase long chain base subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTLC3, Length 6,169 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC3-201ENST00000399002 TRPC5OSA6NMA1 111 aa8.79□□□□□ -1
SPTLC3-201ENST00000399002 LRRIQ3A6PVS8 624 aaPredicted RBP8.79□□□□□ -1
SPTLC3-201ENST00000399002 F5H6K3 240 aa8.79□□□□□ -1
SPTLC3-201ENST00000399002 CYP27B1O15528 508 aa8.79□□□□□ -1
SPTLC3-201ENST00000399002 SNAP25P60880 206 aa8.79□□□□□ -1
SPTLC3-201ENST00000399002 KLRC3Q07444 240 aa8.79□□□□□ -1
SPTLC3-201ENST00000399002 DCAF4L1Q3SXM0 396 aa8.79□□□□□ -1
SPTLC3-201ENST00000399002 ZBTB41Q5SVQ8 909 aa8.79□□□□□ -1
SPTLC3-201ENST00000399002 USP17L6PQ6QN14 398 aa8.79□□□□□ -1
SPTLC3-201ENST00000399002 MOXD1Q6UVY6 613 aa8.79□□□□□ -1
SPTLC3-201ENST00000399002 KIF12Q96FN5 646 aa8.79□□□□□ -1
SPTLC3-201ENST00000399002 RIT2Q99578 217 aa8.79□□□□□ -1
SPTLC3-201ENST00000399002 EGFL8Q99944 293 aa8.79□□□□□ -1
SPTLC3-201ENST00000399002 NDEL1Q9GZM8 345 aa8.79□□□□□ -1
SPTLC3-201ENST00000399002 SMARCAD1Q9H4L7 1026 aa8.79□□□□□ -1
SPTLC3-201ENST00000399002 ANKEF1Q9NU02 776 aa8.79□□□□□ -1
SPTLC3-201ENST00000399002 ZFATQ9P243 1243 aa8.79□□□□□ -1
SPTLC3-201ENST00000399002 H0Y626 953 aa8.79□□□□□ -1
SPTLC3-201ENST00000399002 TEX33O43247 280 aa8.79□□□□□ -1
SPTLC3-201ENST00000399002 TRIM16O95361 564 aa8.79□□□□□ -1
SPTLC3-201ENST00000399002 CYP2C8P10632 490 aa8.79□□□□□ -1
SPTLC3-201ENST00000399002 MYL2P10916 166 aa8.79□□□□□ -1
SPTLC3-201ENST00000399002 CHN1P15882 459 aa8.79□□□□□ -1
SPTLC3-201ENST00000399002 PNPLA4P41247 253 aa8.79□□□□□ -1
SPTLC3-201ENST00000399002 IRX1P78414 480 aaPredicted RBP8.79□□□□□ -1
SPTLC3-201ENST00000399002 ZNF543Q08ER8 600 aa8.79□□□□□ -1
SPTLC3-201ENST00000399002 SYNE4Q8N205 404 aa8.79□□□□□ -1
SPTLC3-201ENST00000399002 CEP70Q8NHQ1 597 aa8.79□□□□□ -1
SPTLC3-201ENST00000399002 PCDHGB4Q9UN71 923 aa8.79□□□□□ -1
SPTLC3-201ENST00000399002 G3BP2Q9UN86 482 aaKnown RBP8.79□□□□□ -1
SPTLC3-201ENST00000399002 KIF20BQ96Q89 1820 aa8.79□□□□□ -1
SPTLC3-201ENST00000399002 A0A087WWV3 80 aa8.79□□□□□ -1
SPTLC3-201ENST00000399002 VGLL3A8MV65 326 aa8.79□□□□□ -1
SPTLC3-201ENST00000399002 DPYSL4O14531 572 aa8.79□□□□□ -1
SPTLC3-201ENST00000399002 SYF2O95926 243 aaKnown RBP8.79□□□□□ -1
SPTLC3-201ENST00000399002 PDK1Q15118 436 aa8.79□□□□□ -1
SPTLC3-201ENST00000399002 FASTKD1Q53R41 847 aaKnown RBP8.79□□□□□ -1
SPTLC3-201ENST00000399002 ATG9AQ7Z3C6 839 aa8.79□□□□□ -1
SPTLC3-201ENST00000399002 AFG1LQ8WV93 481 aa8.79□□□□□ -1
SPTLC3-201ENST00000399002 XPO6Q96QU8 1125 aaKnown RBP8.79□□□□□ -1
SPTLC3-201ENST00000399002 OSBPL1AQ9BXW6 950 aa8.79□□□□□ -1
SPTLC3-201ENST00000399002 XPO7Q9UIA9 1087 aaKnown RBP8.79□□□□□ -1
SPTLC3-201ENST00000399002 PPRC1Q5VV67 1664 aaKnown RBP8.79□□□□□ -1
SPTLC3-201ENST00000399002 NEURL4Q96JN8 1562 aa8.79□□□□□ -1
SPTLC3-201ENST00000399002 IQGAP1P46940 1657 aa8.79□□□□□ -1
SPTLC3-201ENST00000399002 RPLP2P05387 115 aaKnown RBP8.79□□□□□ -1
SPTLC3-201ENST00000399002 SPRP35270 261 aaPredicted RBP8.79□□□□□ -1
SPTLC3-201ENST00000399002 STX3Q13277 289 aa8.79□□□□□ -1
SPTLC3-201ENST00000399002 TBC1D10BQ4KMP7 808 aaPredicted RBP8.79□□□□□ -1
SPTLC3-201ENST00000399002 SPATA2LQ8IUW3 424 aaPredicted RBP8.79□□□□□ -1
SPTLC3-201ENST00000399002 GLYCTKQ8IVS8 523 aa8.79□□□□□ -1
SPTLC3-201ENST00000399002 CCNYL1Q8N7R7 359 aa8.79□□□□□ -1
SPTLC3-201ENST00000399002 NSUN4Q96CB9 384 aaKnown RBP8.79□□□□□ -1
SPTLC3-201ENST00000399002 WDR70Q9NW82 654 aa8.79□□□□□ -1
SPTLC3-201ENST00000399002 CDY2AQ9Y6F7 541 aa8.79□□□□□ -1
SPTLC3-201ENST00000399002 CDY1Q9Y6F8 540 aa8.79□□□□□ -1
SPTLC3-201ENST00000399002 KCNN4O15554 427 aa8.78□□□□□ -1
SPTLC3-201ENST00000399002 MAP3K13O43283 966 aa8.78□□□□□ -1
SPTLC3-201ENST00000399002 TDP2O95551 362 aa8.78□□□□□ -1
SPTLC3-201ENST00000399002 CYBBP04839 570 aa8.78□□□□□ -1
SPTLC3-201ENST00000399002 PRLRP16471 622 aa8.78□□□□□ -1
SPTLC3-201ENST00000399002 ZNF211Q13398 564 aaPredicted RBP8.78□□□□□ -1
SPTLC3-201ENST00000399002 PTK6Q13882 451 aa8.78□□□□□ -1
SPTLC3-201ENST00000399002 LBRQ14739 615 aaKnown RBP8.78□□□□□ -1
SPTLC3-201ENST00000399002 STRIP1Q5VSL9 837 aa8.78□□□□□ -1
SPTLC3-201ENST00000399002 BRINP3Q76B58 766 aa8.78□□□□□ -1
SPTLC3-201ENST00000399002 DDIASQ8IXT1 998 aa8.78□□□□□ -1
SPTLC3-201ENST00000399002 PPIL6Q8IXY8 311 aa8.78□□□□□ -1
SPTLC3-201ENST00000399002 SRBD1Q8N5C6 995 aaKnown RBP8.78□□□□□ -1
SPTLC3-201ENST00000399002 ATPAF2Q8N5M1 289 aa8.78□□□□□ -1
SPTLC3-201ENST00000399002 DCUN1D1Q96GG9 259 aa8.78□□□□□ -1
SPTLC3-201ENST00000399002 FAM49AQ9H0Q0 323 aaPredicted RBP8.78□□□□□ -1
SPTLC3-201ENST00000399002 RIC8BQ9NVN3 520 aa8.78□□□□□ -1
SPTLC3-201ENST00000399002 CDV3Q9UKY7 258 aaKnown RBP8.78□□□□□ -1
SPTLC3-201ENST00000399002 SLIT1O75093 1534 aa8.78□□□□□ -1
SPTLC3-201ENST00000399002 CNTFP26441 200 aa8.78□□□□□ -1
SPTLC3-201ENST00000399002 ADORA2BP29275 332 aa8.78□□□□□ -1
SPTLC3-201ENST00000399002 PRDX5P30044 214 aa8.78□□□□□ -1
SPTLC3-201ENST00000399002 KHDRBS1Q07666 443 aaKnown RBP eCLIP8.78□□□□□ -1
SPTLC3-201ENST00000399002 SF3B3Q15393 1217 aaKnown RBP8.78□□□□□ -1
SPTLC3-201ENST00000399002 CAPRIN2Q6IMN6 1127 aaKnown RBP8.78□□□□□ -1
SPTLC3-201ENST00000399002 UGT3A1Q6NUS8 523 aa8.78□□□□□ -1
SPTLC3-201ENST00000399002 LCA5Q86VQ0 697 aa8.78□□□□□ -1
SPTLC3-201ENST00000399002 LONP2Q86WA8 852 aa8.78□□□□□ -1
SPTLC3-201ENST00000399002 CD302Q8IX05 232 aa8.78□□□□□ -1
SPTLC3-201ENST00000399002 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP8.78□□□□□ -1
SPTLC3-201ENST00000399002 IGDCC4Q8TDY8 1250 aa8.78□□□□□ -1
SPTLC3-201ENST00000399002 ANKRD27Q96NW4 1050 aa8.78□□□□□ -1
SPTLC3-201ENST00000399002 WRNIP1Q96S55 665 aa8.78□□□□□ -1
SPTLC3-201ENST00000399002 NIPSNAP3AQ9UFN0 247 aaPredicted RBP8.78□□□□□ -1
SPTLC3-201ENST00000399002 ZBBXA8MT70 800 aa8.78□□□□□ -1
SPTLC3-201ENST00000399002 ATP5BP06576 529 aaKnown RBP8.78□□□□□ -1
SPTLC3-201ENST00000399002 MTA1Q13330 715 aa8.78□□□□□ -1
SPTLC3-201ENST00000399002 TMEM132DQ14C87 1099 aa8.78□□□□□ -1
SPTLC3-201ENST00000399002 TRIM69Q86WT6 500 aa8.78□□□□□ -1
SPTLC3-201ENST00000399002 LDHDQ86WU2 507 aa8.78□□□□□ -1
SPTLC3-201ENST00000399002 C1orf54Q8WWF1 131 aa8.78□□□□□ -1
SPTLC3-201ENST00000399002 ERGIC2Q96RQ1 377 aa8.78□□□□□ -1
SPTLC3-201ENST00000399002 MTMR4Q9NYA4 1195 aa8.78□□□□□ -1
SPTLC3-201ENST00000399002 TJP2Q9UDY2 1190 aa8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms