RNA–Protein interactions for RNA: ENST00000398137.5

U2AF1-203, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best) BASIC

Gene U2AF1, Length 1,019 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-203ENST00000398137 KCTD10Q9H3F6 313 aa27.67■■■□□ 2.02
U2AF1-203ENST00000398137 AGO2Q9UKV8 859 aaKnown RBP27.67■■■□□ 2.02
U2AF1-203ENST00000398137 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP27.66■■■□□ 2.02
U2AF1-203ENST00000398137 F8W810 466 aa27.66■■■□□ 2.02
U2AF1-203ENST00000398137 FAM189A1O60320 539 aa27.66■■■□□ 2.02
U2AF1-203ENST00000398137 PRCPP42785 496 aa27.66■■■□□ 2.02
U2AF1-203ENST00000398137 SCNN1GP51170 649 aa27.66■■■□□ 2.02
U2AF1-203ENST00000398137 PTPN14Q15678 1187 aa27.66■■■□□ 2.02
U2AF1-203ENST00000398137 SLC22A17Q8WUG5 538 aa27.66■■■□□ 2.02
U2AF1-203ENST00000398137 PCIF1Q9H4Z3 704 aa27.66■■■□□ 2.02
U2AF1-203ENST00000398137 UBN1Q9NPG3 1134 aa27.66■■■□□ 2.02
U2AF1-203ENST00000398137 TMEM63CQ9P1W3 806 aa27.66■■■□□ 2.02
U2AF1-203ENST00000398137 GIT1Q9Y2X7 761 aa27.66■■■□□ 2.02
U2AF1-203ENST00000398137 CARNS1A5YM72 827 aa27.65■■■□□ 2.02
U2AF1-203ENST00000398137 CLIC2O15247 247 aa27.65■■■□□ 2.02
U2AF1-203ENST00000398137 LILRB3O75022 631 aa27.65■■■□□ 2.02
U2AF1-203ENST00000398137 ALDH2P05091 517 aa27.65■■■□□ 2.02
U2AF1-203ENST00000398137 GARTP22102 1010 aa27.65■■■□□ 2.02
U2AF1-203ENST00000398137 TNFSF9P41273 254 aa27.65■■■□□ 2.02
U2AF1-203ENST00000398137 CAVIN1Q6NZI2 390 aaKnown RBP27.65■■■□□ 2.02
U2AF1-203ENST00000398137 RNF168Q8IYW5 571 aaPredicted RBP27.65■■■□□ 2.02
U2AF1-203ENST00000398137 TRIML1Q8N9V2 468 aa27.65■■■□□ 2.02
U2AF1-203ENST00000398137 ZSWIM2Q8NEG5 633 aa27.65■■■□□ 2.02
U2AF1-203ENST00000398137 CASP10Q92851 521 aa27.65■■■□□ 2.02
U2AF1-203ENST00000398137 SAAL1Q96ER3 474 aa27.65■■■□□ 2.02
U2AF1-203ENST00000398137 ACAP3Q96P50 834 aa27.65■■■□□ 2.02
U2AF1-203ENST00000398137 FAN1Q9Y2M0 1017 aa27.65■■■□□ 2.02
U2AF1-203ENST00000398137 EPCAMP16422 314 aa27.64■■■□□ 2.02
U2AF1-203ENST00000398137 HOXB8P17481 243 aaPredicted RBP27.64■■■□□ 2.02
U2AF1-203ENST00000398137 YARSP54577 528 aaKnown RBP27.64■■■□□ 2.02
U2AF1-203ENST00000398137 COBLL1Q53SF7 1204 aa27.64■■■□□ 2.02
U2AF1-203ENST00000398137 TAS1R1Q7RTX1 841 aa27.64■■■□□ 2.02
U2AF1-203ENST00000398137 NOC3LQ8WTT2 800 aaKnown RBP27.64■■■□□ 2.02
U2AF1-203ENST00000398137 FAM193BQ96PV7 902 aaPredicted RBP27.64■■■□□ 2.02
U2AF1-203ENST00000398137 GOLGA8IPA6NC78 632 aa27.63■■■□□ 2.01
U2AF1-203ENST00000398137 GOLGA8JA6NMD2 632 aa27.63■■■□□ 2.01
U2AF1-203ENST00000398137 PRR33A8MZF0 331 aa27.63■■■□□ 2.01
U2AF1-203ENST00000398137 CLTAP09496 248 aa27.63■■■□□ 2.01
U2AF1-203ENST00000398137 SRGAP2BP0DMP2 458 aa27.63■■■□□ 2.01
U2AF1-203ENST00000398137 CXCL8P10145 99 aa27.63■■■□□ 2.01
U2AF1-203ENST00000398137 CD44P16070 742 aaKnown RBP27.63■■■□□ 2.01
U2AF1-203ENST00000398137 CA8P35219 290 aa27.63■■■□□ 2.01
U2AF1-203ENST00000398137 ACOT2P49753 483 aa27.63■■■□□ 2.01
U2AF1-203ENST00000398137 CYP2J2P51589 502 aa27.63■■■□□ 2.01
U2AF1-203ENST00000398137 SNRPFP62306 86 aaKnown RBP27.63■■■□□ 2.01
U2AF1-203ENST00000398137 KLHL40Q2TBA0 621 aa27.63■■■□□ 2.01
U2AF1-203ENST00000398137 RBM43Q6ZSC3 357 aaKnown RBP27.63■■■□□ 2.01
U2AF1-203ENST00000398137 ADSSL1Q8N142 457 aa27.63■■■□□ 2.01
U2AF1-203ENST00000398137 GOLGA5Q8TBA6 731 aa27.63■■■□□ 2.01
U2AF1-203ENST00000398137 SNX27Q96L92 541 aa27.63■■■□□ 2.01
U2AF1-203ENST00000398137 RPS6KC1Q96S38 1066 aa27.63■■■□□ 2.01
U2AF1-203ENST00000398137 FAM213AQ9BRX8 229 aa27.63■■■□□ 2.01
U2AF1-203ENST00000398137 CXCL16Q9H2A7 254 aa27.63■■■□□ 2.01
U2AF1-203ENST00000398137 HSPBP1Q9NZL4 362 aa27.63■■■□□ 2.01
U2AF1-203ENST00000398137 PRG3Q9Y2Y8 225 aaPredicted RBP27.63■■■□□ 2.01
U2AF1-203ENST00000398137 TECTAO75443 2155 aa27.63■■■□□ 2.01
U2AF1-203ENST00000398137 PDXKO00764 312 aa27.62■■■□□ 2.01
U2AF1-203ENST00000398137 MEFVO15553 781 aaPredicted RBP27.62■■■□□ 2.01
U2AF1-203ENST00000398137 STIM1Q13586 685 aa27.62■■■□□ 2.01
U2AF1-203ENST00000398137 NFKBIBQ15653 356 aa27.62■■■□□ 2.01
U2AF1-203ENST00000398137 KYAT1Q16773 422 aa27.62■■■□□ 2.01
U2AF1-203ENST00000398137 C12orf76Q8N812 135 aaPredicted RBP27.62■■■□□ 2.01
U2AF1-203ENST00000398137 RPGRIP1Q96KN7 1286 aa27.62■■■□□ 2.01
U2AF1-203ENST00000398137 TOPORSQ9NS56 1045 aaPredicted RBP27.62■■■□□ 2.01
U2AF1-203ENST00000398137 CGNQ9P2M7 1197 aaKnown RBP27.62■■■□□ 2.01
U2AF1-203ENST00000398137 CPSF3Q9UKF6 684 aaKnown RBP27.62■■■□□ 2.01
U2AF1-203ENST00000398137 ENOX2Q16206 610 aaKnown RBP27.61■■■□□ 2.01
U2AF1-203ENST00000398137 KLHL10Q6JEL2 608 aa27.61■■■□□ 2.01
U2AF1-203ENST00000398137 C12orf56Q8IXR9 622 aa27.61■■■□□ 2.01
U2AF1-203ENST00000398137 SYAP1Q96A49 352 aaPredicted RBP27.61■■■□□ 2.01
U2AF1-203ENST00000398137 KLHL5Q96PQ7 755 aa27.61■■■□□ 2.01
U2AF1-203ENST00000398137 ADAM7Q9H2U9 754 aa27.61■■■□□ 2.01
U2AF1-203ENST00000398137 PLXNA3P51805 1871 aa27.61■■■□□ 2.01
U2AF1-203ENST00000398137 PPP1R3GB7ZBB8 358 aa27.6■■■□□ 2.01
U2AF1-203ENST00000398137 PSMA7O14818 248 aa27.6■■■□□ 2.01
U2AF1-203ENST00000398137 CALUO43852 315 aaPredicted RBP27.6■■■□□ 2.01
U2AF1-203ENST00000398137 EXTL3O43909 919 aa27.6■■■□□ 2.01
U2AF1-203ENST00000398137 NR3C1P04150 777 aa27.6■■■□□ 2.01
U2AF1-203ENST00000398137 CNPP09543 421 aaKnown RBP27.6■■■□□ 2.01
U2AF1-203ENST00000398137 OR1G1P47890 313 aa27.6■■■□□ 2.01
U2AF1-203ENST00000398137 SLC10A6Q3KNW5 377 aa27.6■■■□□ 2.01
U2AF1-203ENST00000398137 ZCWPW2Q504Y3 356 aa27.6■■■□□ 2.01
U2AF1-203ENST00000398137 GLRA4Q5JXX5 417 aa27.6■■■□□ 2.01
U2AF1-203ENST00000398137 CRELD2Q6UXH1 353 aaPredicted RBP27.6■■■□□ 2.01
U2AF1-203ENST00000398137 GPD1LQ8N335 351 aa27.6■■■□□ 2.01
U2AF1-203ENST00000398137 RPF1Q9H9Y2 349 aaKnown RBP27.6■■■□□ 2.01
U2AF1-203ENST00000398137 CACNG4Q9UBN1 327 aa27.6■■■□□ 2.01
U2AF1-203ENST00000398137 CTNND2Q9UQB3 1225 aa27.6■■■□□ 2.01
U2AF1-203ENST00000398137 TRAF3IP3Q9Y228 551 aa27.6■■■□□ 2.01
U2AF1-203ENST00000398137 PTGESO14684 152 aa27.59■■■□□ 2.01
U2AF1-203ENST00000398137 KIAA0391O15091 583 aaKnown RBP27.59■■■□□ 2.01
U2AF1-203ENST00000398137 SOD2P04179 222 aa27.59■■■□□ 2.01
U2AF1-203ENST00000398137 WEE2P0C1S8 567 aa27.59■■■□□ 2.01
U2AF1-203ENST00000398137 BMS1Q14692 1282 aaKnown RBP27.59■■■□□ 2.01
U2AF1-203ENST00000398137 HERC2P3Q9BVR0 1158 aa27.59■■■□□ 2.01
U2AF1-203ENST00000398137 POMKQ9H5K3 350 aa27.59■■■□□ 2.01
U2AF1-203ENST00000398137 DENND4AQ7Z401 1863 aa27.58■■■□□ 2.01
U2AF1-203ENST00000398137 LDHAP00338 332 aaKnown RBP27.58■■■□□ 2.01
U2AF1-203ENST00000398137 PPP1R2P41236 205 aa27.58■■■□□ 2.01
U2AF1-203ENST00000398137 PPP2R3AQ06190 1150 aa27.58■■■□□ 2.01
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms