RNA–Protein interactions for RNA: ENST00000396594.7

GNE-202, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

TSL 1 (best) BASIC

Gene GNE, Length 5,298 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-202ENST00000396594 TACO1Q9BSH4 297 aaKnown RBP16.47■□□□□ 0.23
GNE-202ENST00000396594 CCL15-CCL14A0A0B4J2E2 113 aa16.47■□□□□ 0.23
GNE-202ENST00000396594 SNAP25P60880 206 aa16.47■□□□□ 0.23
GNE-202ENST00000396594 GFPT1Q06210 699 aaPredicted RBP16.47■□□□□ 0.23
GNE-202ENST00000396594 IFT88Q13099 833 aa16.47■□□□□ 0.23
GNE-202ENST00000396594 PLD1Q13393 1074 aa16.47■□□□□ 0.23
GNE-202ENST00000396594 CCL15Q16663 113 aa16.47■□□□□ 0.23
GNE-202ENST00000396594 C3orf20Q8ND61 904 aa16.47■□□□□ 0.23
GNE-202ENST00000396594 CCDC138Q96M89 665 aa16.47■□□□□ 0.23
GNE-202ENST00000396594 DHX35Q9H5Z1 703 aaKnown RBP16.47■□□□□ 0.23
GNE-202ENST00000396594 AGAP1Q9UPQ3 857 aa16.47■□□□□ 0.23
GNE-202ENST00000396594 IZUMO3Q5VZ72 239 aa16.47■□□□□ 0.23
GNE-202ENST00000396594 ATP6V0D2Q8N8Y2 350 aa16.47■□□□□ 0.23
GNE-202ENST00000396594 RBBP8NLQ8NC74 664 aaPredicted RBP16.47■□□□□ 0.23
GNE-202ENST00000396594 ATP6V1G3Q96LB4 118 aa16.47■□□□□ 0.23
GNE-202ENST00000396594 XAB2Q9HCS7 855 aaKnown RBP16.47■□□□□ 0.23
GNE-202ENST00000396594 GGA3Q9NZ52 723 aa16.47■□□□□ 0.23
GNE-202ENST00000396594 STX18Q9P2W9 335 aaKnown RBP16.47■□□□□ 0.23
GNE-202ENST00000396594 STOML1Q9UBI4 398 aa16.47■□□□□ 0.23
GNE-202ENST00000396594 IFNAR2P48551 515 aa16.47■□□□□ 0.23
GNE-202ENST00000396594 FNTAP49354 379 aa16.47■□□□□ 0.23
GNE-202ENST00000396594 PTK6Q13882 451 aa16.47■□□□□ 0.23
GNE-202ENST00000396594 ANKS1AQ92625 1134 aa16.47■□□□□ 0.23
GNE-202ENST00000396594 NAT9Q9BTE0 207 aa16.47■□□□□ 0.23
GNE-202ENST00000396594 STRNO43815 780 aa16.46■□□□□ 0.23
GNE-202ENST00000396594 ACTR2P61160 394 aa16.46■□□□□ 0.23
GNE-202ENST00000396594 PTK2BQ14289 1009 aa16.46■□□□□ 0.23
GNE-202ENST00000396594 UGT3A1Q6NUS8 523 aa16.46■□□□□ 0.23
GNE-202ENST00000396594 GPIHBP1Q8IV16 184 aa16.46■□□□□ 0.23
GNE-202ENST00000396594 CHMP6Q96FZ7 201 aa16.46■□□□□ 0.23
GNE-202ENST00000396594 TSPYL2Q9H2G4 693 aaPredicted RBP16.46■□□□□ 0.23
GNE-202ENST00000396594 PRR29P0C7W0 189 aa16.46■□□□□ 0.23
GNE-202ENST00000396594 UCHL3P15374 230 aa16.46■□□□□ 0.23
GNE-202ENST00000396594 ZNF157P51786 506 aaPredicted RBP16.46■□□□□ 0.23
GNE-202ENST00000396594 HDAC4P56524 1084 aa16.46■□□□□ 0.23
GNE-202ENST00000396594 EIF3EP60228 445 aaKnown RBP16.46■□□□□ 0.23
GNE-202ENST00000396594 ANGEL2Q5VTE6 544 aaKnown RBP16.46■□□□□ 0.23
GNE-202ENST00000396594 PLEKHH3Q7Z736 793 aa16.46■□□□□ 0.23
GNE-202ENST00000396594 ATPAF2Q8N5M1 289 aa16.46■□□□□ 0.23
GNE-202ENST00000396594 RNPC3Q96LT9 517 aaKnown RBP16.46■□□□□ 0.23
GNE-202ENST00000396594 HAUS5O94927 633 aa16.46■□□□□ 0.23
GNE-202ENST00000396594 FGFR2P21802 821 aa16.46■□□□□ 0.23
GNE-202ENST00000396594 TSTA3Q13630 321 aaPredicted RBP16.46■□□□□ 0.23
GNE-202ENST00000396594 NR1I3Q14994 352 aa16.46■□□□□ 0.23
GNE-202ENST00000396594 ST13P4Q8IZP2 240 aaPredicted RBP16.46■□□□□ 0.23
GNE-202ENST00000396594 TNIP2Q8NFZ5 429 aa16.46■□□□□ 0.23
GNE-202ENST00000396594 FAM163AQ96GL9 167 aaPredicted RBP16.46■□□□□ 0.23
GNE-202ENST00000396594 GTF3C4Q9UKN8 822 aa16.46■□□□□ 0.23
GNE-202ENST00000396594 CDH16O75309 829 aa16.46■□□□□ 0.22
GNE-202ENST00000396594 HSPA9P38646 679 aaKnown RBP16.46■□□□□ 0.22
GNE-202ENST00000396594 KRT17Q04695 432 aa16.46■□□□□ 0.22
GNE-202ENST00000396594 GPS1Q13098 491 aa16.46■□□□□ 0.22
GNE-202ENST00000396594 KIF19Q2TAC6 998 aa16.46■□□□□ 0.22
GNE-202ENST00000396594 KRT80Q6KB66 452 aa16.46■□□□□ 0.22
GNE-202ENST00000396594 MFN1Q8IWA4 741 aa16.46■□□□□ 0.22
GNE-202ENST00000396594 UHMK1Q8TAS1 419 aaKnown RBP16.46■□□□□ 0.22
GNE-202ENST00000396594 SNX24Q9Y343 169 aa16.46■□□□□ 0.22
GNE-202ENST00000396594 ANXA9O76027 345 aa16.45■□□□□ 0.22
GNE-202ENST00000396594 STIP1P31948 543 aaKnown RBP16.45■□□□□ 0.22
GNE-202ENST00000396594 RGS4P49798 205 aa16.45■□□□□ 0.22
GNE-202ENST00000396594 MAP3K10Q02779 954 aa16.45■□□□□ 0.22
GNE-202ENST00000396594 EFTUD2Q15029 972 aaKnown RBP eCLIP16.45■□□□□ 0.22
GNE-202ENST00000396594 PDK2Q15119 407 aa16.45■□□□□ 0.22
GNE-202ENST00000396594 NAPEPLDQ6IQ20 393 aa16.45■□□□□ 0.22
GNE-202ENST00000396594 INTS5Q6P9B9 1019 aaKnown RBP16.45■□□□□ 0.22
GNE-202ENST00000396594 FGD4Q96M96 766 aa16.45■□□□□ 0.22
GNE-202ENST00000396594 DEFB129Q9H1M3 183 aa16.45■□□□□ 0.22
GNE-202ENST00000396594 A0A0A6YYK5 440 aaPredicted RBP16.45■□□□□ 0.22
GNE-202ENST00000396594 NEMP1O14524 444 aa16.45■□□□□ 0.22
GNE-202ENST00000396594 CLGNO14967 610 aa16.45■□□□□ 0.22
GNE-202ENST00000396594 OGTO15294 1046 aa16.45■□□□□ 0.22
GNE-202ENST00000396594 CYP2C9P11712 490 aa16.45■□□□□ 0.22
GNE-202ENST00000396594 AARS2Q5JTZ9 985 aaKnown RBP16.45■□□□□ 0.22
GNE-202ENST00000396594 TIGD7Q6NT04 549 aaPredicted RBP16.45■□□□□ 0.22
GNE-202ENST00000396594 C4orf19Q8IY42 314 aa16.45■□□□□ 0.22
GNE-202ENST00000396594 SPDL1Q96EA4 605 aa16.45■□□□□ 0.22
GNE-202ENST00000396594 SLITRK1Q96PX8 696 aa16.45■□□□□ 0.22
GNE-202ENST00000396594 CNPY3Q9BT09 278 aa16.45■□□□□ 0.22
GNE-202ENST00000396594 BRD8Q9H0E9 1235 aa16.45■□□□□ 0.22
GNE-202ENST00000396594 KANSL3Q9P2N6 904 aa16.45■□□□□ 0.22
GNE-202ENST00000396594 EFCAB14O75071 495 aa16.45■□□□□ 0.22
GNE-202ENST00000396594 NPTXRO95502 500 aa16.45■□□□□ 0.22
GNE-202ENST00000396594 GPD1P21695 349 aa16.45■□□□□ 0.22
GNE-202ENST00000396594 ITPK1Q13572 414 aa16.45■□□□□ 0.22
GNE-202ENST00000396594 PREPLQ4J6C6 727 aaPredicted RBP16.45■□□□□ 0.22
GNE-202ENST00000396594 PRLRP16471 622 aa16.45■□□□□ 0.22
GNE-202ENST00000396594 MEI1Q5TIA1 1274 aa16.45■□□□□ 0.22
GNE-202ENST00000396594 NUGGCQ68CJ6 796 aa16.45■□□□□ 0.22
GNE-202ENST00000396594 KCTD16Q68DU8 428 aa16.45■□□□□ 0.22
GNE-202ENST00000396594 EPB41L4AQ9HCS5 686 aaPredicted RBP16.45■□□□□ 0.22
GNE-202ENST00000396594 TPX2Q9ULW0 747 aaKnown RBP16.45■□□□□ 0.22
GNE-202ENST00000396594 LRRIQ3A6PVS8 624 aaPredicted RBP16.44■□□□□ 0.22
GNE-202ENST00000396594 GUCY2CP25092 1073 aa16.44■□□□□ 0.22
GNE-202ENST00000396594 GRIK1P39086 918 aa16.44■□□□□ 0.22
GNE-202ENST00000396594 TMTC4Q5T4D3 741 aa16.44■□□□□ 0.22
GNE-202ENST00000396594 GLT1D1Q96MS3 346 aa16.44■□□□□ 0.22
GNE-202ENST00000396594 HACD3Q9P035 362 aa16.44■□□□□ 0.22
GNE-202ENST00000396594 MAD2L2Q9UI95 211 aa16.44■□□□□ 0.22
GNE-202ENST00000396594 MANSC4A6NHS7 340 aaPredicted RBP16.44■□□□□ 0.22
GNE-202ENST00000396594 HIST1H2AGP0C0S8 130 aaPredicted RBP16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms