RNA–Protein interactions for RNA: ENST00000394104.6

GAPVD1-206, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 2 BASIC

Gene GAPVD1, Length 6,737 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-206ENST00000394104 GFM2Q969S9 779 aaKnown RBP5.96□□□□□ -1.45
GAPVD1-206ENST00000394104 PIH1D3Q9NQM4 214 aaKnown RBP5.96□□□□□ -1.45
GAPVD1-206ENST00000394104 ZBTB39O15060 712 aa5.96□□□□□ -1.46
GAPVD1-206ENST00000394104 CAND2O75155 1236 aa5.96□□□□□ -1.46
GAPVD1-206ENST00000394104 RPS7P62081 194 aaKnown RBP5.96□□□□□ -1.46
GAPVD1-206ENST00000394104 STX3Q13277 289 aa5.96□□□□□ -1.46
GAPVD1-206ENST00000394104 FAM196AQ6ZSG2 479 aa5.96□□□□□ -1.46
GAPVD1-206ENST00000394104 NUDT18Q6ZVK8 323 aa5.96□□□□□ -1.46
GAPVD1-206ENST00000394104 C16orf62Q7Z3J2 963 aa5.96□□□□□ -1.46
GAPVD1-206ENST00000394104 TMC4Q7Z404 712 aa5.96□□□□□ -1.46
GAPVD1-206ENST00000394104 BNIPLQ7Z465 357 aa5.96□□□□□ -1.46
GAPVD1-206ENST00000394104 TLK2Q86UE8 772 aa5.96□□□□□ -1.46
GAPVD1-206ENST00000394104 NLRP10Q86W26 655 aa5.96□□□□□ -1.46
GAPVD1-206ENST00000394104 DGKHQ86XP1 1220 aa5.96□□□□□ -1.46
GAPVD1-206ENST00000394104 UXS1Q8NBZ7 420 aa5.96□□□□□ -1.46
GAPVD1-206ENST00000394104 OSBP2Q969R2 916 aa5.96□□□□□ -1.46
GAPVD1-206ENST00000394104 FAM167AQ96KS9 214 aa5.96□□□□□ -1.46
GAPVD1-206ENST00000394104 MAN1C1Q9NR34 630 aa5.96□□□□□ -1.46
GAPVD1-206ENST00000394104 NEDD4P46934 1319 aa5.96□□□□□ -1.46
GAPVD1-206ENST00000394104 CYP26A1O43174 497 aa5.96□□□□□ -1.46
GAPVD1-206ENST00000394104 NMT2O60551 498 aa5.96□□□□□ -1.46
GAPVD1-206ENST00000394104 USP1O94782 785 aa5.96□□□□□ -1.46
GAPVD1-206ENST00000394104 UPP2O95045 317 aa5.96□□□□□ -1.46
GAPVD1-206ENST00000394104 CD2BP2O95400 341 aaKnown RBP5.96□□□□□ -1.46
GAPVD1-206ENST00000394104 APRTP07741 180 aa5.96□□□□□ -1.46
GAPVD1-206ENST00000394104 SERPINB4P48594 390 aa5.96□□□□□ -1.46
GAPVD1-206ENST00000394104 ARHGEF7Q14155 803 aa5.96□□□□□ -1.46
GAPVD1-206ENST00000394104 C16orf72Q14CZ0 275 aa5.96□□□□□ -1.46
GAPVD1-206ENST00000394104 SHROOM1Q2M3G4 852 aaPredicted RBP5.96□□□□□ -1.46
GAPVD1-206ENST00000394104 DAB2IPQ5VWQ8 1189 aa5.96□□□□□ -1.46
GAPVD1-206ENST00000394104 CIAPIN1Q6FI81 312 aa5.96□□□□□ -1.46
GAPVD1-206ENST00000394104 PTRHD1Q6GMV3 140 aaKnown RBP5.96□□□□□ -1.46
GAPVD1-206ENST00000394104 RCSD1Q6JBY9 416 aa5.96□□□□□ -1.46
GAPVD1-206ENST00000394104 GLYCTKQ8IVS8 523 aa5.96□□□□□ -1.46
GAPVD1-206ENST00000394104 IL17REQ8NFR9 667 aa5.96□□□□□ -1.46
GAPVD1-206ENST00000394104 GRAMD1AQ96CP6 724 aa5.96□□□□□ -1.46
GAPVD1-206ENST00000394104 WNK4Q96J92 1243 aa5.96□□□□□ -1.46
GAPVD1-206ENST00000394104 C2orf40Q9H1Z8 148 aa5.96□□□□□ -1.46
GAPVD1-206ENST00000394104 GJB4Q9NTQ9 266 aa5.96□□□□□ -1.46
GAPVD1-206ENST00000394104 UTP6Q9NYH9 597 aaKnown RBP5.96□□□□□ -1.46
GAPVD1-206ENST00000394104 PSD3Q9NYI0 1048 aa5.96□□□□□ -1.46
GAPVD1-206ENST00000394104 SPASTQ9UBP0 616 aa5.96□□□□□ -1.46
GAPVD1-206ENST00000394104 PAIP2BQ9ULR5 123 aaKnown RBP5.96□□□□□ -1.46
GAPVD1-206ENST00000394104 ZHX2Q9Y6X8 837 aa5.96□□□□□ -1.46
GAPVD1-206ENST00000394104 GPATCH8Q9UKJ3 1502 aaKnown RBP5.96□□□□□ -1.46
GAPVD1-206ENST00000394104 EMSYQ7Z589 1322 aa5.96□□□□□ -1.46
GAPVD1-206ENST00000394104 CTTNBP2Q8WZ74 1663 aa5.96□□□□□ -1.46
GAPVD1-206ENST00000394104 FAM187AA6NFU0 413 aa5.96□□□□□ -1.46
GAPVD1-206ENST00000394104 RSPH10B2B2RC85 870 aa5.96□□□□□ -1.46
GAPVD1-206ENST00000394104 USP17L15C9J2P7 530 aa5.96□□□□□ -1.46
GAPVD1-206ENST00000394104 USP17L10C9JJH3 530 aa5.96□□□□□ -1.46
GAPVD1-206ENST00000394104 USP17L13C9JLJ4 530 aa5.96□□□□□ -1.46
GAPVD1-206ENST00000394104 USP17L11C9JVI0 530 aa5.96□□□□□ -1.46
GAPVD1-206ENST00000394104 USP17L18D6R9N7 530 aa5.96□□□□□ -1.46
GAPVD1-206ENST00000394104 USP17L22D6RA61 530 aa5.96□□□□□ -1.46
GAPVD1-206ENST00000394104 USP17L17D6RBQ6 530 aa5.96□□□□□ -1.46
GAPVD1-206ENST00000394104 USP17L19D6RCP7 530 aa5.96□□□□□ -1.46
GAPVD1-206ENST00000394104 USP17L20D6RJB6 530 aa5.96□□□□□ -1.46
GAPVD1-206ENST00000394104 RSPH10BP0C881 870 aa5.96□□□□□ -1.46
GAPVD1-206ENST00000394104 MYBP10242 640 aa5.96□□□□□ -1.46
GAPVD1-206ENST00000394104 SERPINB3P29508 390 aa5.96□□□□□ -1.46
GAPVD1-206ENST00000394104 FEN1P39748 380 aaKnown RBP5.96□□□□□ -1.46
GAPVD1-206ENST00000394104 USP17L24Q0WX57 530 aa5.96□□□□□ -1.46
GAPVD1-206ENST00000394104 TP53BP2Q13625 1128 aa5.96□□□□□ -1.46
GAPVD1-206ENST00000394104 TTLL4Q14679 1199 aa5.96□□□□□ -1.46
GAPVD1-206ENST00000394104 TSC22D1Q15714 1073 aa5.96□□□□□ -1.46
GAPVD1-206ENST00000394104 ZRANB3Q5FWF4 1079 aa5.96□□□□□ -1.46
GAPVD1-206ENST00000394104 USP17L6PQ6QN14 398 aa5.96□□□□□ -1.46
GAPVD1-206ENST00000394104 MTHFD1LQ6UB35 978 aa5.96□□□□□ -1.46
GAPVD1-206ENST00000394104 CCDC149Q6ZUS6 474 aa5.96□□□□□ -1.46
GAPVD1-206ENST00000394104 NLGN1Q8N2Q7 840 aa5.96□□□□□ -1.46
GAPVD1-206ENST00000394104 TNIP2Q8NFZ5 429 aa5.96□□□□□ -1.46
GAPVD1-206ENST00000394104 ZNF473Q8WTR7 871 aaKnown RBP5.96□□□□□ -1.46
GAPVD1-206ENST00000394104 MAGEB10Q96LZ2 347 aaPredicted RBP5.96□□□□□ -1.46
GAPVD1-206ENST00000394104 TRIM62Q9BVG3 475 aa5.96□□□□□ -1.46
GAPVD1-206ENST00000394104 GID8Q9NWU2 228 aa5.96□□□□□ -1.46
GAPVD1-206ENST00000394104 AMACRQ9UHK6 382 aa5.96□□□□□ -1.46
GAPVD1-206ENST00000394104 KIAA0232Q92628 1395 aa5.96□□□□□ -1.46
GAPVD1-206ENST00000394104 TK2O00142 265 aa5.96□□□□□ -1.46
GAPVD1-206ENST00000394104 HNRNPRO43390 633 aaKnown RBP5.96□□□□□ -1.46
GAPVD1-206ENST00000394104 CRKP46108 304 aa5.96□□□□□ -1.46
GAPVD1-206ENST00000394104 HSD17B4P51659 736 aa5.96□□□□□ -1.46
GAPVD1-206ENST00000394104 PSMC6P62333 389 aa5.96□□□□□ -1.46
GAPVD1-206ENST00000394104 CDC16Q13042 620 aa5.96□□□□□ -1.46
GAPVD1-206ENST00000394104 DHX40Q8IX18 779 aaKnown RBP5.96□□□□□ -1.46
GAPVD1-206ENST00000394104 OR8H2Q8N162 312 aa5.96□□□□□ -1.46
GAPVD1-206ENST00000394104 KRT78Q8N1N4 520 aa5.96□□□□□ -1.46
GAPVD1-206ENST00000394104 TADA1Q96BN2 335 aa5.96□□□□□ -1.46
GAPVD1-206ENST00000394104 TSPAN17Q96FV3 270 aa5.96□□□□□ -1.46
GAPVD1-206ENST00000394104 FAM118BQ9BPY3 351 aa5.96□□□□□ -1.46
GAPVD1-206ENST00000394104 SHCBP1LQ9BZQ2 653 aa5.96□□□□□ -1.46
GAPVD1-206ENST00000394104 QTRT2Q9H974 415 aaKnown RBP5.96□□□□□ -1.46
GAPVD1-206ENST00000394104 LATS2Q9NRM7 1088 aa5.96□□□□□ -1.46
GAPVD1-206ENST00000394104 KRT84Q9NSB2 600 aa5.96□□□□□ -1.46
GAPVD1-206ENST00000394104 PRAMEF22A3QJZ6 481 aa5.95□□□□□ -1.46
GAPVD1-206ENST00000394104 FAM196BA6NMK8 535 aa5.95□□□□□ -1.46
GAPVD1-206ENST00000394104 TADA2AO75478 443 aa5.95□□□□□ -1.46
GAPVD1-206ENST00000394104 GGPS1O95749 300 aa5.95□□□□□ -1.46
GAPVD1-206ENST00000394104 CDC27P30260 824 aa5.95□□□□□ -1.46
GAPVD1-206ENST00000394104 SLFNL1Q499Z3 407 aa5.95□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms