RNA–Protein interactions for RNA: ENST00000390654.7

COL23A1-201, Transcript of collagen type XXIII alpha 1 chain, humanhuman

APPRIS P2 TSL 5 BASIC

Gene COL23A1, Length 3,061 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL23A1-201ENST00000390654 CGB2Q6NT52 195 aa22.34■■□□□ 1.17
COL23A1-201ENST00000390654 RASA4BC9J798 803 aa22.34■■□□□ 1.17
COL23A1-201ENST00000390654 HNRNPDLO14979 420 aaKnown RBP22.34■■□□□ 1.17
COL23A1-201ENST00000390654 RASA4O43374 803 aa22.34■■□□□ 1.17
COL23A1-201ENST00000390654 ENTPD3O75355 529 aa22.34■■□□□ 1.17
COL23A1-201ENST00000390654 GAS8O95995 478 aa22.34■■□□□ 1.17
COL23A1-201ENST00000390654 ITIH2P19823 946 aa22.34■■□□□ 1.17
COL23A1-201ENST00000390654 DNAJC3Q13217 504 aa22.34■■□□□ 1.17
COL23A1-201ENST00000390654 IZUMO3Q5VZ72 239 aa22.34■■□□□ 1.17
COL23A1-201ENST00000390654 RHBDF2Q6PJF5 856 aa22.34■■□□□ 1.17
COL23A1-201ENST00000390654 SERPINB12Q96P63 405 aa22.34■■□□□ 1.17
COL23A1-201ENST00000390654 ROPN1BQ9BZX4 212 aaPredicted RBP22.34■■□□□ 1.17
COL23A1-201ENST00000390654 ROPN1Q9HAT0 212 aaPredicted RBP22.34■■□□□ 1.17
COL23A1-201ENST00000390654 WHRNQ9P202 907 aa22.34■■□□□ 1.17
COL23A1-201ENST00000390654 P4HA2O15460 535 aa22.33■■□□□ 1.17
COL23A1-201ENST00000390654 FOXN2P32314 431 aa22.33■■□□□ 1.17
COL23A1-201ENST00000390654 COPS2P61201 443 aa22.33■■□□□ 1.17
COL23A1-201ENST00000390654 CLEC16AQ2KHT3 1053 aa22.33■■□□□ 1.17
COL23A1-201ENST00000390654 C4orf33Q8N1A6 199 aa22.33■■□□□ 1.17
COL23A1-201ENST00000390654 KIFAP3Q92845 792 aa22.33■■□□□ 1.17
COL23A1-201ENST00000390654 PLVAPQ9BX97 442 aa22.33■■□□□ 1.17
COL23A1-201ENST00000390654 CCDC134Q9H6E4 229 aa22.33■■□□□ 1.17
COL23A1-201ENST00000390654 AGO4Q9HCK5 861 aaKnown RBP22.33■■□□□ 1.17
COL23A1-201ENST00000390654 SLCO1B3Q9NPD5 702 aa22.33■■□□□ 1.17
COL23A1-201ENST00000390654 MTA2O94776 668 aa22.33■■□□□ 1.16
COL23A1-201ENST00000390654 TCF4P15884 667 aa22.33■■□□□ 1.16
COL23A1-201ENST00000390654 KMT5AQ9NQR1 393 aa22.33■■□□□ 1.16
COL23A1-201ENST00000390654 NKIRAS1Q9NYS0 192 aa22.33■■□□□ 1.16
COL23A1-201ENST00000390654 GSTA1P08263 222 aa22.32■■□□□ 1.16
COL23A1-201ENST00000390654 SLC39A4Q6P5W5 647 aa22.32■■□□□ 1.16
COL23A1-201ENST00000390654 MCOLN2Q8IZK6 566 aa22.32■■□□□ 1.16
COL23A1-201ENST00000390654 TMEM161BQ8NDZ6 487 aa22.32■■□□□ 1.16
COL23A1-201ENST00000390654 CKAP2Q8WWK9 683 aa22.32■■□□□ 1.16
COL23A1-201ENST00000390654 TMEM237Q96Q45 408 aa22.32■■□□□ 1.16
COL23A1-201ENST00000390654 LTBP1Q14766 1721 aa22.32■■□□□ 1.16
COL23A1-201ENST00000390654 GOLGA8SH3BPF8 625 aa22.32■■□□□ 1.16
COL23A1-201ENST00000390654 GOLGA8MH3BSY2 632 aa22.32■■□□□ 1.16
COL23A1-201ENST00000390654 ATF7P17544 494 aaPredicted RBP22.32■■□□□ 1.16
COL23A1-201ENST00000390654 FASTKD3Q14CZ7 662 aaKnown RBP22.32■■□□□ 1.16
COL23A1-201ENST00000390654 P3H1Q32P28 736 aa22.32■■□□□ 1.16
COL23A1-201ENST00000390654 SCARA3Q6AZY7 606 aa22.32■■□□□ 1.16
COL23A1-201ENST00000390654 CROCCP2Q86T23 111 aa22.32■■□□□ 1.16
COL23A1-201ENST00000390654 ERICH1Q86X53 443 aa22.32■■□□□ 1.16
COL23A1-201ENST00000390654 KCTD17Q8N5Z5 321 aa22.32■■□□□ 1.16
COL23A1-201ENST00000390654 LBHD1Q9BQE6 289 aaPredicted RBP22.32■■□□□ 1.16
COL23A1-201ENST00000390654 TMEM8AQ9HCN3 771 aa22.32■■□□□ 1.16
COL23A1-201ENST00000390654 BANF1O75531 89 aa22.32■■□□□ 1.16
COL23A1-201ENST00000390654 CCNE2O96020 404 aa22.32■■□□□ 1.16
COL23A1-201ENST00000390654 WNT7BP56706 349 aa22.32■■□□□ 1.16
COL23A1-201ENST00000390654 PITPNM3Q9BZ71 974 aa22.32■■□□□ 1.16
COL23A1-201ENST00000390654 FHDC1Q9C0D6 1143 aaPredicted RBP22.32■■□□□ 1.16
COL23A1-201ENST00000390654 SLX4Q8IY92 1834 aa22.31■■□□□ 1.16
COL23A1-201ENST00000390654 OAS1P00973 400 aaKnown RBP22.31■■□□□ 1.16
COL23A1-201ENST00000390654 TNNI1P19237 187 aa22.31■■□□□ 1.16
COL23A1-201ENST00000390654 NSFP46459 744 aaKnown RBP22.31■■□□□ 1.16
COL23A1-201ENST00000390654 ACOT2P49753 483 aa22.31■■□□□ 1.16
COL23A1-201ENST00000390654 MYBPC2Q14324 1141 aa22.31■■□□□ 1.16
COL23A1-201ENST00000390654 C12orf50Q8NA57 414 aaPredicted RBP22.31■■□□□ 1.16
COL23A1-201ENST00000390654 RBM15Q96T37 977 aaKnown RBP eCLIP22.31■■□□□ 1.16
COL23A1-201ENST00000390654 C10orf88Q9H8K7 445 aa22.31■■□□□ 1.16
COL23A1-201ENST00000390654 ETNK1Q9HBU6 452 aa22.31■■□□□ 1.16
COL23A1-201ENST00000390654 SAYSD1Q9NPB0 183 aa22.31■■□□□ 1.16
COL23A1-201ENST00000390654 ARL2BPQ9Y2Y0 163 aa22.31■■□□□ 1.16
COL23A1-201ENST00000390654 PAX7P23759 505 aa22.31■■□□□ 1.16
COL23A1-201ENST00000390654 DMP1Q13316 513 aaPredicted RBP22.31■■□□□ 1.16
COL23A1-201ENST00000390654 ZNF568Q3ZCX4 644 aa22.31■■□□□ 1.16
COL23A1-201ENST00000390654 SEZ6Q53EL9 994 aa22.31■■□□□ 1.16
COL23A1-201ENST00000390654 ATL2Q8NHH9 583 aa22.31■■□□□ 1.16
COL23A1-201ENST00000390654 MORC4Q8TE76 937 aa22.31■■□□□ 1.16
COL23A1-201ENST00000390654 DDX27Q96GQ7 796 aaKnown RBP22.31■■□□□ 1.16
COL23A1-201ENST00000390654 TRAIPQ9BWF2 469 aa22.31■■□□□ 1.16
COL23A1-201ENST00000390654 KLHL14Q9P2G3 628 aa22.31■■□□□ 1.16
COL23A1-201ENST00000390654 CEP83Q9Y592 693 aa22.31■■□□□ 1.16
COL23A1-201ENST00000390654 ADGRA3Q8IWK6 1321 aa22.3■■□□□ 1.16
COL23A1-201ENST00000390654 ECHDC2Q86YB7 292 aa22.3■■□□□ 1.16
COL23A1-201ENST00000390654 AKT1S1Q96B36 256 aa22.3■■□□□ 1.16
COL23A1-201ENST00000390654 TMEM63BQ5T3F8 832 aa22.3■■□□□ 1.16
COL23A1-201ENST00000390654 ANO5Q75V66 913 aa22.3■■□□□ 1.16
COL23A1-201ENST00000390654 CEP170P1Q96L14 293 aa22.3■■□□□ 1.16
COL23A1-201ENST00000390654 HERC5Q9UII4 1024 aaKnown RBP22.3■■□□□ 1.16
COL23A1-201ENST00000390654 CTDP1Q9Y5B0 961 aaPredicted RBP22.3■■□□□ 1.16
COL23A1-201ENST00000390654 UPP2O95045 317 aa22.29■■□□□ 1.16
COL23A1-201ENST00000390654 HARSP12081 509 aaKnown RBP22.29■■□□□ 1.16
COL23A1-201ENST00000390654 BNIP1Q12981 228 aa22.29■■□□□ 1.16
COL23A1-201ENST00000390654 PTK6Q13882 451 aa22.29■■□□□ 1.16
COL23A1-201ENST00000390654 ATP6V0A4Q9HBG4 840 aa22.29■■□□□ 1.16
COL23A1-201ENST00000390654 DSG3P32926 999 aa22.29■■□□□ 1.16
COL23A1-201ENST00000390654 WDR4P57081 412 aaKnown RBP22.29■■□□□ 1.16
COL23A1-201ENST00000390654 ZNF449Q6P9G9 518 aa22.29■■□□□ 1.16
COL23A1-201ENST00000390654 ANKLE1Q8NAG6 615 aa22.29■■□□□ 1.16
COL23A1-201ENST00000390654 ZNF516Q92618 1163 aa22.29■■□□□ 1.16
COL23A1-201ENST00000390654 C1orf112Q9NSG2 853 aa22.29■■□□□ 1.16
COL23A1-201ENST00000390654 ZNF536O15090 1300 aa22.29■■□□□ 1.16
COL23A1-201ENST00000390654 WDR91A4D1P6 747 aa22.29■■□□□ 1.16
COL23A1-201ENST00000390654 IFNB1P01574 187 aa22.29■■□□□ 1.16
COL23A1-201ENST00000390654 TARSP26639 723 aaKnown RBP22.29■■□□□ 1.16
COL23A1-201ENST00000390654 CAP2P40123 477 aa22.29■■□□□ 1.16
COL23A1-201ENST00000390654 GPC3P51654 580 aa22.29■■□□□ 1.16
COL23A1-201ENST00000390654 RPS6P62753 249 aaKnown RBP22.29■■□□□ 1.16
COL23A1-201ENST00000390654 TMEM270Q6UE05 265 aa22.29■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms