RNA–Protein interactions for RNA: ENST00000389413.7

PTPRN2-201, Transcript of protein tyrosine phosphatase, receptor type N2, humanhuman

TSL 1 (best) BASIC

Gene PTPRN2, Length 4,723 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN2-201ENST00000389413 SGSM1Q2NKQ1 1148 aa17.04■□□□□ 0.32
PTPRN2-201ENST00000389413 ARL13BQ3SXY8 428 aa17.04■□□□□ 0.32
PTPRN2-201ENST00000389413 XRRA1Q6P2D8 792 aa17.04■□□□□ 0.32
PTPRN2-201ENST00000389413 C4orf33Q8N1A6 199 aa17.04■□□□□ 0.32
PTPRN2-201ENST00000389413 TOPORSQ9NS56 1045 aaPredicted RBP17.04■□□□□ 0.32
PTPRN2-201ENST00000389413 FBXO28Q9NVF7 368 aa17.04■□□□□ 0.32
PTPRN2-201ENST00000389413 ZBTB12Q9Y330 459 aaPredicted RBP17.04■□□□□ 0.32
PTPRN2-201ENST00000389413 WNT7AO00755 349 aa17.04■□□□□ 0.32
PTPRN2-201ENST00000389413 NOP14P78316 857 aaKnown RBP17.04■□□□□ 0.32
PTPRN2-201ENST00000389413 HEATR6Q6AI08 1181 aaKnown RBP17.04■□□□□ 0.32
PTPRN2-201ENST00000389413 DNAAF5Q86Y56 855 aa17.04■□□□□ 0.32
PTPRN2-201ENST00000389413 CEP120Q8N960 986 aa17.04■□□□□ 0.32
PTPRN2-201ENST00000389413 RDM1Q8NG50 284 aa17.04■□□□□ 0.32
PTPRN2-201ENST00000389413 SLC35C1Q96A29 364 aa17.04■□□□□ 0.32
PTPRN2-201ENST00000389413 LRGUKQ96M69 825 aa17.04■□□□□ 0.32
PTPRN2-201ENST00000389413 AKAP12Q02952 1782 aa17.03■□□□□ 0.32
PTPRN2-201ENST00000389413 CBWD2Q8IUF1 395 aa17.03■□□□□ 0.32
PTPRN2-201ENST00000389413 CDKL3Q8IVW4 592 aaPredicted RBP17.03■□□□□ 0.32
PTPRN2-201ENST00000389413 LRRC34Q8IZ02 419 aa17.03■□□□□ 0.32
PTPRN2-201ENST00000389413 TNFRSF25Q93038 417 aa17.03■□□□□ 0.32
PTPRN2-201ENST00000389413 ALKBH8Q96BT7 664 aaKnown RBP17.03■□□□□ 0.32
PTPRN2-201ENST00000389413 HDAC11Q96DB2 347 aa17.03■□□□□ 0.32
PTPRN2-201ENST00000389413 SLC13A1Q9BZW2 595 aa17.03■□□□□ 0.32
PTPRN2-201ENST00000389413 FAM49AQ9H0Q0 323 aaPredicted RBP17.03■□□□□ 0.32
PTPRN2-201ENST00000389413 GDF3Q9NR23 364 aa17.03■□□□□ 0.32
PTPRN2-201ENST00000389413 G3BP2Q9UN86 482 aaKnown RBP17.03■□□□□ 0.32
PTPRN2-201ENST00000389413 KITP10721 976 aa17.03■□□□□ 0.32
PTPRN2-201ENST00000389413 RAD23BP54727 409 aa17.03■□□□□ 0.32
PTPRN2-201ENST00000389413 PTENP60484 403 aa17.03■□□□□ 0.32
PTPRN2-201ENST00000389413 STX1BP61266 288 aa17.03■□□□□ 0.32
PTPRN2-201ENST00000389413 DDTLA6NHG4 134 aaPredicted RBP17.03■□□□□ 0.32
PTPRN2-201ENST00000389413 HNRNPCL1O60812 293 aaKnown RBP17.03■□□□□ 0.32
PTPRN2-201ENST00000389413 CAND2O75155 1236 aa17.03■□□□□ 0.32
PTPRN2-201ENST00000389413 ICAM1P05362 532 aa17.03■□□□□ 0.32
PTPRN2-201ENST00000389413 FGRP09769 529 aa17.03■□□□□ 0.32
PTPRN2-201ENST00000389413 FAM153BP0C7A2 387 aa17.03■□□□□ 0.32
PTPRN2-201ENST00000389413 ITGA4P13612 1032 aa17.03■□□□□ 0.32
PTPRN2-201ENST00000389413 RPS6P62753 249 aaKnown RBP17.03■□□□□ 0.32
PTPRN2-201ENST00000389413 FAM153CQ494X1 144 aa17.03■□□□□ 0.32
PTPRN2-201ENST00000389413 AP1ARQ63HQ0 302 aa17.03■□□□□ 0.32
PTPRN2-201ENST00000389413 C1orf228Q6PIY5 440 aa17.03■□□□□ 0.32
PTPRN2-201ENST00000389413 ATP8B4Q8TF62 1192 aa17.03■□□□□ 0.32
PTPRN2-201ENST00000389413 ADAM33Q9BZ11 813 aa17.03■□□□□ 0.32
PTPRN2-201ENST00000389413 VCX3AQ9NNX9 186 aa17.03■□□□□ 0.32
PTPRN2-201ENST00000389413 KLHL8Q9P2G9 620 aaPredicted RBP17.03■□□□□ 0.32
PTPRN2-201ENST00000389413 FAM153AQ9UHL3 310 aa17.03■□□□□ 0.32
PTPRN2-201ENST00000389413 MX2P20592 715 aa17.02■□□□□ 0.32
PTPRN2-201ENST00000389413 TKFCQ3LXA3 575 aa17.02■□□□□ 0.32
PTPRN2-201ENST00000389413 FEZF2Q8TBJ5 459 aa17.02■□□□□ 0.32
PTPRN2-201ENST00000389413 BTBD6Q96KE9 485 aa17.02■□□□□ 0.32
PTPRN2-201ENST00000389413 KIFC3Q9BVG8 833 aa17.02■□□□□ 0.32
PTPRN2-201ENST00000389413 PCDHGC5Q9Y5F6 944 aa17.02■□□□□ 0.32
PTPRN2-201ENST00000389413 NFAT5O94916 1531 aa17.02■□□□□ 0.32
PTPRN2-201ENST00000389413 GOLGA8RI6L899 631 aa17.02■□□□□ 0.32
PTPRN2-201ENST00000389413 CYP11B1P15538 503 aa17.02■□□□□ 0.32
PTPRN2-201ENST00000389413 ERVK-9P63128 1117 aa17.02■□□□□ 0.32
PTPRN2-201ENST00000389413 ART3Q13508 389 aa17.02■□□□□ 0.32
PTPRN2-201ENST00000389413 BTNL9Q6UXG8 535 aa17.02■□□□□ 0.32
PTPRN2-201ENST00000389413 METTL23Q86XA0 190 aa17.02■□□□□ 0.32
PTPRN2-201ENST00000389413 TAAR1Q96RJ0 339 aa17.02■□□□□ 0.32
PTPRN2-201ENST00000389413 GCOM2Q9BZD3 368 aaPredicted RBP17.02■□□□□ 0.32
PTPRN2-201ENST00000389413 TMEM39BQ9GZU3 492 aa17.02■□□□□ 0.32
PTPRN2-201ENST00000389413 PFDN6O15212 129 aa17.02■□□□□ 0.32
PTPRN2-201ENST00000389413 APOBEC3FQ8IUX4 373 aaKnown RBP17.02■□□□□ 0.32
PTPRN2-201ENST00000389413 EPS8L3Q8TE67 593 aaKnown RBP17.02■□□□□ 0.32
PTPRN2-201ENST00000389413 RCCD1A6NED2 376 aa17.02■□□□□ 0.31
PTPRN2-201ENST00000389413 ABL1P00519 1130 aa17.02■□□□□ 0.31
PTPRN2-201ENST00000389413 LRRC55Q6ZSA7 311 aa17.02■□□□□ 0.31
PTPRN2-201ENST00000389413 AGGF1Q8N302 714 aaeCLIP17.02■□□□□ 0.315e-7■■■■■ 56.1
PTPRN2-201ENST00000389413 VPS11Q9H270 941 aa17.02■□□□□ 0.31
PTPRN2-201ENST00000389413 ALG13Q9NP73 1137 aaKnown RBP17.02■□□□□ 0.31
PTPRN2-201ENST00000389413 AMPD2Q01433 879 aa17.01■□□□□ 0.31
PTPRN2-201ENST00000389413 C1orf146Q5VVC0 180 aa17.01■□□□□ 0.31
PTPRN2-201ENST00000389413 GSDMBQ8TAX9 411 aa17.01■□□□□ 0.31
PTPRN2-201ENST00000389413 SPATA33Q96N06 139 aa17.01■□□□□ 0.31
PTPRN2-201ENST00000389413 GPRC5CQ9NQ84 441 aa17.01■□□□□ 0.31
PTPRN2-201ENST00000389413 CCDC195A0A1B0GUA6 201 aa17.01■□□□□ 0.31
PTPRN2-201ENST00000389413 ASAP2O43150 1006 aa17.01■□□□□ 0.31
PTPRN2-201ENST00000389413 CCDC22O60826 627 aa17.01■□□□□ 0.31
PTPRN2-201ENST00000389413 TTLL4Q14679 1199 aa17.01■□□□□ 0.31
PTPRN2-201ENST00000389413 RBBP5Q15291 538 aaKnown RBP17.01■□□□□ 0.31
PTPRN2-201ENST00000389413 TAF1BQ53T94 588 aaPredicted RBP17.01■□□□□ 0.31
PTPRN2-201ENST00000389413 FSCBQ5H9T9 825 aa17.01■□□□□ 0.31
PTPRN2-201ENST00000389413 STYK1Q6J9G0 422 aa17.01■□□□□ 0.31
PTPRN2-201ENST00000389413 BEST2Q8NFU1 509 aa17.01■□□□□ 0.31
PTPRN2-201ENST00000389413 SLC20A1Q8WUM9 679 aa17.01■□□□□ 0.31
PTPRN2-201ENST00000389413 AP5M1Q9H0R1 490 aa17.01■□□□□ 0.31
PTPRN2-201ENST00000389413 CFLARO15519 480 aa17.01■□□□□ 0.31
PTPRN2-201ENST00000389413 MXD4Q14582 209 aaPredicted RBP17.01■□□□□ 0.31
PTPRN2-201ENST00000389413 ANKRD20A4Q4UJ75 823 aa17.01■□□□□ 0.31
PTPRN2-201ENST00000389413 ANKRD20A8PQ5CZ79 823 aa17.01■□□□□ 0.31
PTPRN2-201ENST00000389413 ANKRD20A2Q5SQ80 823 aa17.01■□□□□ 0.31
PTPRN2-201ENST00000389413 ANKRD20A1Q5TYW2 823 aa17.01■□□□□ 0.31
PTPRN2-201ENST00000389413 RSPH3Q86UC2 560 aa17.01■□□□□ 0.31
PTPRN2-201ENST00000389413 TEX2Q8IWB9 1127 aa17.01■□□□□ 0.31
PTPRN2-201ENST00000389413 MCUQ8NE86 351 aa17.01■□□□□ 0.31
PTPRN2-201ENST00000389413 ERP27Q96DN0 273 aa17.01■□□□□ 0.31
PTPRN2-201ENST00000389413 PRMT6Q96LA8 375 aaPredicted RBP17.01■□□□□ 0.31
PTPRN2-201ENST00000389413 FAM161BQ96MY7 647 aa17.01■□□□□ 0.31
PTPRN2-201ENST00000389413 DHX35Q9H5Z1 703 aaKnown RBP17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms