RNA–Protein interactions for RNA: ENST00000384344.1

RNU6-39P-201, Transcript of RNA, U6 small nuclear 39, pseudogene, humanhuman

BASIC

Gene RNU6-39P, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-39P-201ENST00000384344 HPS3Q969F9 1004 aa4.25□□□□□ -1.73
RNU6-39P-201ENST00000384344 CDK5RAP3Q96JB5 506 aa4.25□□□□□ -1.73
RNU6-39P-201ENST00000384344 MRGPRX4Q96LA9 322 aa4.25□□□□□ -1.73
RNU6-39P-201ENST00000384344 LRGUKQ96M69 825 aa4.25□□□□□ -1.73
RNU6-39P-201ENST00000384344 WDCPQ9H6R7 721 aa4.25□□□□□ -1.73
RNU6-39P-201ENST00000384344 CNNM1Q9NRU3 951 aa4.25□□□□□ -1.73
RNU6-39P-201ENST00000384344 LMBRD1Q9NUN5 540 aa4.25□□□□□ -1.73
RNU6-39P-201ENST00000384344 SIDT1Q9NXL6 827 aaKnown RBP4.25□□□□□ -1.73
RNU6-39P-201ENST00000384344 RNF181Q9P0P0 153 aa4.25□□□□□ -1.73
RNU6-39P-201ENST00000384344 CEP72Q9P209 647 aa4.25□□□□□ -1.73
RNU6-39P-201ENST00000384344 CFAP97Q9P2B7 532 aa4.25□□□□□ -1.73
RNU6-39P-201ENST00000384344 SLC23A1Q9UHI7 598 aa4.25□□□□□ -1.73
RNU6-39P-201ENST00000384344 USP15Q9Y4E8 981 aaPredicted RBP4.25□□□□□ -1.73
RNU6-39P-201ENST00000384344 LEFTY2O00292 366 aa4.24□□□□□ -1.73
RNU6-39P-201ENST00000384344 MARCH6O60337 910 aa4.24□□□□□ -1.73
RNU6-39P-201ENST00000384344 RPS6KA4O75676 772 aa4.24□□□□□ -1.73
RNU6-39P-201ENST00000384344 C1SP09871 688 aa4.24□□□□□ -1.73
RNU6-39P-201ENST00000384344 LAG3P18627 525 aa4.24□□□□□ -1.73
RNU6-39P-201ENST00000384344 MAKP20794 623 aa4.24□□□□□ -1.73
RNU6-39P-201ENST00000384344 MALP21145 153 aa4.24□□□□□ -1.73
RNU6-39P-201ENST00000384344 ZNF280AP59817 542 aaPredicted RBP4.24□□□□□ -1.73
RNU6-39P-201ENST00000384344 DSC2Q02487 901 aa4.24□□□□□ -1.73
RNU6-39P-201ENST00000384344 KHDC1Q4VXA5 237 aaKnown RBP4.24□□□□□ -1.73
RNU6-39P-201ENST00000384344 TIGD2Q4W5G0 525 aa4.24□□□□□ -1.73
RNU6-39P-201ENST00000384344 ATAT1Q5SQI0 421 aa4.24□□□□□ -1.73
RNU6-39P-201ENST00000384344 FAM102BQ5T8I3 360 aa4.24□□□□□ -1.73
RNU6-39P-201ENST00000384344 TSHZ3Q63HK5 1081 aa4.24□□□□□ -1.73
RNU6-39P-201ENST00000384344 HEATR3Q7Z4Q2 680 aa4.24□□□□□ -1.73
RNU6-39P-201ENST00000384344 DENND1CQ8IV53 801 aa4.24□□□□□ -1.73
RNU6-39P-201ENST00000384344 TPH2Q8IWU9 490 aa4.24□□□□□ -1.73
RNU6-39P-201ENST00000384344 IL17RDQ8NFM7 739 aa4.24□□□□□ -1.73
RNU6-39P-201ENST00000384344 TBC1D15Q8TC07 691 aa4.24□□□□□ -1.73
RNU6-39P-201ENST00000384344 ZNF483Q8TF39 744 aaPredicted RBP4.24□□□□□ -1.73
RNU6-39P-201ENST00000384344 HAS1Q92839 578 aa4.24□□□□□ -1.73
RNU6-39P-201ENST00000384344 ZNF503Q96F45 646 aa4.24□□□□□ -1.73
RNU6-39P-201ENST00000384344 CCDC136Q96JN2 1154 aa4.24□□□□□ -1.73
RNU6-39P-201ENST00000384344 MYOCQ99972 504 aa4.24□□□□□ -1.73
RNU6-39P-201ENST00000384344 VRK1Q99986 396 aaPredicted RBP4.24□□□□□ -1.73
RNU6-39P-201ENST00000384344 GSTO2Q9H4Y5 243 aa4.24□□□□□ -1.73
RNU6-39P-201ENST00000384344 JKAMPQ9P055 326 aa4.24□□□□□ -1.73
RNU6-39P-201ENST00000384344 NOB1Q9ULX3 412 aaKnown RBP4.24□□□□□ -1.73
RNU6-39P-201ENST00000384344 STXBP5LQ9Y2K9 1186 aa4.24□□□□□ -1.73
RNU6-39P-201ENST00000384344 NOX1Q9Y5S8 564 aa4.24□□□□□ -1.73
RNU6-39P-201ENST00000384344 FPGT-TNNI3KV9GXZ4 949 aa4.24□□□□□ -1.73
RNU6-39P-201ENST00000384344 PNPLA7Q6ZV29 1317 aa4.23□□□□□ -1.73
RNU6-39P-201ENST00000384344 CDHR4A6H8M9 788 aa4.23□□□□□ -1.73
RNU6-39P-201ENST00000384344 ERC2O15083 957 aa4.23□□□□□ -1.73
RNU6-39P-201ENST00000384344 MATN3O15232 486 aa4.23□□□□□ -1.73
RNU6-39P-201ENST00000384344 TSPAN6O43657 245 aa4.23□□□□□ -1.73
RNU6-39P-201ENST00000384344 FZD7O75084 574 aa4.23□□□□□ -1.73
RNU6-39P-201ENST00000384344 ERN1O75460 977 aaKnown RBP4.23□□□□□ -1.73
RNU6-39P-201ENST00000384344 ANXA1P04083 346 aa4.23□□□□□ -1.73
RNU6-39P-201ENST00000384344 ADH4P08319 380 aa4.23□□□□□ -1.73
RNU6-39P-201ENST00000384344 CKBP12277 381 aa4.23□□□□□ -1.73
RNU6-39P-201ENST00000384344 MCM7P33993 719 aa4.23□□□□□ -1.73
RNU6-39P-201ENST00000384344 FXR1P51114 621 aaKnown RBP eCLIP4.23□□□□□ -1.73
RNU6-39P-201ENST00000384344 HK3P52790 923 aa4.23□□□□□ -1.73
RNU6-39P-201ENST00000384344 FLYWCH1Q4VC44 716 aa4.23□□□□□ -1.73
RNU6-39P-201ENST00000384344 AGAP9Q5VTM2 703 aa4.23□□□□□ -1.73
RNU6-39P-201ENST00000384344 NXNQ6DKJ4 435 aa4.23□□□□□ -1.73
RNU6-39P-201ENST00000384344 PPP4R4Q6NUP7 873 aa4.23□□□□□ -1.73
RNU6-39P-201ENST00000384344 ZNF365Q70YC5 407 aa4.23□□□□□ -1.73
RNU6-39P-201ENST00000384344 SYT12Q8IV01 421 aa4.23□□□□□ -1.73
RNU6-39P-201ENST00000384344 TCEAL8Q8IYN2 117 aa4.23□□□□□ -1.73
RNU6-39P-201ENST00000384344 MYO1HQ8N1T3 1032 aa4.23□□□□□ -1.73
RNU6-39P-201ENST00000384344 OR56A1Q8NGH5 318 aa4.23□□□□□ -1.73
RNU6-39P-201ENST00000384344 BRIX1Q8TDN6 353 aaKnown RBP4.23□□□□□ -1.73
RNU6-39P-201ENST00000384344 NUP133Q8WUM0 1156 aa4.23□□□□□ -1.73
RNU6-39P-201ENST00000384344 MED15Q96RN5 788 aa4.23□□□□□ -1.73
RNU6-39P-201ENST00000384344 PNKPQ96T60 521 aa4.23□□□□□ -1.73
RNU6-39P-201ENST00000384344 ZNF747Q9BV97 191 aa4.23□□□□□ -1.73
RNU6-39P-201ENST00000384344 PCGF6Q9BYE7 350 aa4.23□□□□□ -1.73
RNU6-39P-201ENST00000384344 SIK2Q9H0K1 926 aa4.23□□□□□ -1.73
RNU6-39P-201ENST00000384344 NRDE2Q9H7Z3 1164 aa4.23□□□□□ -1.73
RNU6-39P-201ENST00000384344 BRD9Q9H8M2 597 aa4.23□□□□□ -1.73
RNU6-39P-201ENST00000384344 AKIP1Q9NQ31 210 aa4.23□□□□□ -1.73
RNU6-39P-201ENST00000384344 RLIMQ9NVW2 624 aa4.23□□□□□ -1.73
RNU6-39P-201ENST00000384344 FBXO34Q9NWN3 711 aa4.23□□□□□ -1.73
RNU6-39P-201ENST00000384344 KLHL42Q9P2K6 505 aa4.23□□□□□ -1.73
RNU6-39P-201ENST00000384344 ABCF2Q9UG63 623 aa4.23□□□□□ -1.73
RNU6-39P-201ENST00000384344 MTO1Q9Y2Z2 717 aaKnown RBP4.23□□□□□ -1.73
RNU6-39P-201ENST00000384344 CHST2Q9Y4C5 530 aa4.23□□□□□ -1.73
RNU6-39P-201ENST00000384344 PCDHA3Q9Y5H8 950 aa4.23□□□□□ -1.73
RNU6-39P-201ENST00000384344 LRRC14BA6NHZ5 514 aa4.22□□□□□ -1.73
RNU6-39P-201ENST00000384344 GRXCR1A8MXD5 290 aa4.22□□□□□ -1.73
RNU6-39P-201ENST00000384344 H3BML4 177 aa4.22□□□□□ -1.73
RNU6-39P-201ENST00000384344 H3BUI4 141 aa4.22□□□□□ -1.73
RNU6-39P-201ENST00000384344 SLC43A1O75387 559 aa4.22□□□□□ -1.73
RNU6-39P-201ENST00000384344 ZNF202O95125 648 aa4.22□□□□□ -1.73
RNU6-39P-201ENST00000384344 GPANK1O95872 356 aa4.22□□□□□ -1.73
RNU6-39P-201ENST00000384344 GNAI2P04899 355 aa4.22□□□□□ -1.73
RNU6-39P-201ENST00000384344 TNFRSF1AP19438 455 aa4.22□□□□□ -1.73
RNU6-39P-201ENST00000384344 TACR2P21452 398 aa4.22□□□□□ -1.73
RNU6-39P-201ENST00000384344 LPOP22079 712 aaPredicted RBP4.22□□□□□ -1.73
RNU6-39P-201ENST00000384344 GCSHP23434 173 aa4.22□□□□□ -1.73
RNU6-39P-201ENST00000384344 PIK3CGP48736 1102 aa4.22□□□□□ -1.73
RNU6-39P-201ENST00000384344 MAP2K6P52564 334 aa4.22□□□□□ -1.73
RNU6-39P-201ENST00000384344 PIGFQ07326 219 aa4.22□□□□□ -1.73
RNU6-39P-201ENST00000384344 ZNF844Q08AG5 666 aa4.22□□□□□ -1.73
RNU6-39P-201ENST00000384344 ABHD18Q0P651 414 aa4.22□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms