RNA–Protein interactions for RNA: ENST00000380180.7

PDLIM5-205, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 2,020 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-205ENST00000380180 CTGFP29279 349 aa21.29■■□□□ 1
PDLIM5-205ENST00000380180 ITIH3Q06033 890 aa21.29■■□□□ 1
PDLIM5-205ENST00000380180 NT5DC3Q86UY8 548 aa21.29■■□□□ 1
PDLIM5-205ENST00000380180 RHOT2Q8IXI1 618 aa21.29■■□□□ 1
PDLIM5-205ENST00000380180 EFCAB13Q8IY85 973 aa21.29■■□□□ 1
PDLIM5-205ENST00000380180 SOCS4Q8WXH5 440 aa21.29■■□□□ 1
PDLIM5-205ENST00000380180 TAF4BQ92750 862 aa21.29■■□□□ 1
PDLIM5-205ENST00000380180 IMPG2Q9BZV3 1241 aa21.29■■□□□ 1
PDLIM5-205ENST00000380180 RNF14Q9UBS8 474 aa21.29■■□□□ 1
PDLIM5-205ENST00000380180 ABT1Q9ULW3 272 aaKnown RBP21.29■■□□□ 1
PDLIM5-205ENST00000380180 SMIM10L2AP0DMW4 78 aa21.29■■□□□ 1
PDLIM5-205ENST00000380180 SMIM10L2BP0DMW5 78 aa21.29■■□□□ 1
PDLIM5-205ENST00000380180 CXCL8P10145 99 aa21.29■■□□□ 1
PDLIM5-205ENST00000380180 MCF2P10911 925 aa21.29■■□□□ 1
PDLIM5-205ENST00000380180 BPIFB4P59827 614 aa21.29■■□□□ 1
PDLIM5-205ENST00000380180 MYL6P60660 151 aa21.29■■□□□ 1
PDLIM5-205ENST00000380180 CFAP221Q4G0U5 840 aa21.29■■□□□ 1
PDLIM5-205ENST00000380180 TMCO3Q6UWJ1 677 aa21.29■■□□□ 1
PDLIM5-205ENST00000380180 RNF216Q9NWF9 866 aaPredicted RBP21.29■■□□□ 1
PDLIM5-205ENST00000380180 RAB21Q9UL25 225 aa21.29■■□□□ 1
PDLIM5-205ENST00000380180 PCDHB4Q9Y5E5 795 aa21.29■■□□□ 1
PDLIM5-205ENST00000380180 NRCAMQ92823 1304 aa21.28■■□□□ 1
PDLIM5-205ENST00000380180 IGHA2P01877 340 aa21.28■■□□□ 1
PDLIM5-205ENST00000380180 TMEM191BP0C7N4 346 aa21.28■■□□□ 1
PDLIM5-205ENST00000380180 STAG3L1P0CL83 205 aa21.28■■□□□ 1
PDLIM5-205ENST00000380180 TM4SF4P48230 202 aa21.28■■□□□ 1
PDLIM5-205ENST00000380180 TMEM270Q6UE05 265 aa21.28■■□□□ 1
PDLIM5-205ENST00000380180 ZNF410Q86VK4 478 aa21.28■■□□□ 1
PDLIM5-205ENST00000380180 ABCB6Q9NP58 842 aa21.28■■□□□ 1
PDLIM5-205ENST00000380180 CTTNBP2NLQ9P2B4 639 aa21.28■■□□□ 1
PDLIM5-205ENST00000380180 KCNK3O14649 394 aa21.28■■□□□ 1
PDLIM5-205ENST00000380180 IL18RAPO95256 599 aa21.28■■□□□ 1
PDLIM5-205ENST00000380180 HADHBP55084 474 aaKnown RBP21.28■■□□□ 1
PDLIM5-205ENST00000380180 TRPC3Q13507 836 aa21.28■■□□□ 1
PDLIM5-205ENST00000380180 TCEAL1Q15170 157 aa21.28■■□□□ 1
PDLIM5-205ENST00000380180 SGSM1Q2NKQ1 1148 aa21.28■■□□□ 1
PDLIM5-205ENST00000380180 ACAD10Q6JQN1 1059 aa21.28■■□□□ 1
PDLIM5-205ENST00000380180 AMFRQ9UKV5 643 aa21.28■■□□□ 1
PDLIM5-205ENST00000380180 CNTN6Q9UQ52 1028 aa21.28■■□□□ 1
PDLIM5-205ENST00000380180 CCDC151A5D8V7 595 aa21.27■■□□□ 1
PDLIM5-205ENST00000380180 TSPAN1O60635 241 aa21.27■■□□□ 1
PDLIM5-205ENST00000380180 TNNC2P02585 160 aa21.27■■□□□ 1
PDLIM5-205ENST00000380180 TMEM62Q0P6H9 643 aa21.27■■□□□ 1
PDLIM5-205ENST00000380180 MFSD10Q14728 455 aa21.27■■□□□ 1
PDLIM5-205ENST00000380180 BRD3Q15059 726 aa21.27■■□□□ 1
PDLIM5-205ENST00000380180 KIZQ2M2Z5 673 aa21.27■■□□□ 1
PDLIM5-205ENST00000380180 ZNF677Q86XU0 584 aa21.27■■□□□ 1
PDLIM5-205ENST00000380180 MMGT1Q8N4V1 131 aa21.27■■□□□ 1
PDLIM5-205ENST00000380180 ANKRD36BP1Q96IX9 119 aa21.27■■□□□ 1
PDLIM5-205ENST00000380180 FAM49AQ9H0Q0 323 aaPredicted RBP21.27■■□□□ 1
PDLIM5-205ENST00000380180 CHORDC1Q9UHD1 332 aaPredicted RBP21.27■■□□□ 1
PDLIM5-205ENST00000380180 LACTBL1A8MY62 500 aa21.26■□□□□ 0.99
PDLIM5-205ENST00000380180 MEFVO15553 781 aaPredicted RBP21.26■□□□□ 0.99
PDLIM5-205ENST00000380180 ERLIN2O94905 339 aa21.26■□□□□ 0.99
PDLIM5-205ENST00000380180 CPT1AP50416 773 aa21.26■□□□□ 0.99
PDLIM5-205ENST00000380180 BEX3Q00994 111 aa21.26■□□□□ 0.99
PDLIM5-205ENST00000380180 CLEC16AQ2KHT3 1053 aa21.26■□□□□ 0.99
PDLIM5-205ENST00000380180 CC2D1AQ6P1N0 951 aaPredicted RBP21.26■□□□□ 0.99
PDLIM5-205ENST00000380180 HES6Q96HZ4 224 aa21.26■□□□□ 0.99
PDLIM5-205ENST00000380180 AP5M1Q9H0R1 490 aa21.26■□□□□ 0.99
PDLIM5-205ENST00000380180 Q9Y3F1 56 aa21.26■□□□□ 0.99
PDLIM5-205ENST00000380180 A0A1B0GUA9 196 aa21.26■□□□□ 0.99
PDLIM5-205ENST00000380180 CES2O00748 559 aa21.26■□□□□ 0.99
PDLIM5-205ENST00000380180 SEC31AO94979 1220 aaKnown RBP21.26■□□□□ 0.99
PDLIM5-205ENST00000380180 FGFR4P22455 802 aa21.26■□□□□ 0.99
PDLIM5-205ENST00000380180 VSNL1P62760 191 aa21.26■□□□□ 0.99
PDLIM5-205ENST00000380180 HIC1Q14526 733 aa21.26■□□□□ 0.99
PDLIM5-205ENST00000380180 PBKQ96KB5 322 aa21.26■□□□□ 0.99
PDLIM5-205ENST00000380180 ADAMTS10Q9H324 1103 aa21.26■□□□□ 0.99
PDLIM5-205ENST00000380180 GINS2Q9Y248 185 aa21.26■□□□□ 0.99
PDLIM5-205ENST00000380180 MBLAC1A4D2B0 266 aaPredicted RBP21.25■□□□□ 0.99
PDLIM5-205ENST00000380180 ATMINO43313 823 aaPredicted RBP21.25■□□□□ 0.99
PDLIM5-205ENST00000380180 CA12O43570 354 aa21.25■□□□□ 0.99
PDLIM5-205ENST00000380180 ZRANB2O95218 330 aaKnown RBP eCLIP21.25■□□□□ 0.99
PDLIM5-205ENST00000380180 MYL3P08590 195 aa21.25■□□□□ 0.99
PDLIM5-205ENST00000380180 UNGP13051 313 aaPredicted RBP21.25■□□□□ 0.99
PDLIM5-205ENST00000380180 PSEN2P49810 448 aa21.25■□□□□ 0.99
PDLIM5-205ENST00000380180 RNASE9P60153 205 aaKnown RBP21.25■□□□□ 0.99
PDLIM5-205ENST00000380180 RBBP8NLQ8NC74 664 aaPredicted RBP21.25■□□□□ 0.99
PDLIM5-205ENST00000380180 CALR3Q96L12 384 aaKnown RBP21.25■□□□□ 0.99
PDLIM5-205ENST00000380180 SMIM35A0A1B0GVV1 85 aa21.24■□□□□ 0.99
PDLIM5-205ENST00000380180 HAS3O00219 553 aa21.24■□□□□ 0.99
PDLIM5-205ENST00000380180 GPR32O75388 356 aa21.24■□□□□ 0.99
PDLIM5-205ENST00000380180 NFICP08651 508 aa21.24■□□□□ 0.99
PDLIM5-205ENST00000380180 CYP2C9P11712 490 aa21.24■□□□□ 0.99
PDLIM5-205ENST00000380180 WDR93Q6P2C0 686 aa21.24■□□□□ 0.99
PDLIM5-205ENST00000380180 UBR7Q8N806 425 aa21.24■□□□□ 0.99
PDLIM5-205ENST00000380180 ZNF653Q96CK0 615 aa21.24■□□□□ 0.99
PDLIM5-205ENST00000380180 CCDC94Q9BW85 323 aaPredicted RBP21.24■□□□□ 0.99
PDLIM5-205ENST00000380180 XYLT2Q9H1B5 865 aa21.24■□□□□ 0.99
PDLIM5-205ENST00000380180 CDHR5Q9HBB8 845 aa21.24■□□□□ 0.99
PDLIM5-205ENST00000380180 ARFGAP3Q9NP61 516 aa21.24■□□□□ 0.99
PDLIM5-205ENST00000380180 RBM12Q9NTZ6 932 aaKnown RBP21.24■□□□□ 0.99
PDLIM5-205ENST00000380180 GTF3C4Q9UKN8 822 aa21.24■□□□□ 0.99
PDLIM5-205ENST00000380180 CYP1A2P05177 515 aa21.24■□□□□ 0.99
PDLIM5-205ENST00000380180 TUBBP07437 444 aa21.24■□□□□ 0.99
PDLIM5-205ENST00000380180 GNA15P30679 374 aa21.24■□□□□ 0.99
PDLIM5-205ENST00000380180 SLC10A6Q3KNW5 377 aa21.24■□□□□ 0.99
PDLIM5-205ENST00000380180 JADE1Q6IE81 842 aa21.24■□□□□ 0.99
PDLIM5-205ENST00000380180 RUFY4Q6ZNE9 571 aa21.24■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms