RNA–Protein interactions for RNA: ENST00000379053.4

LINC00654-201, long intergenic non-protein coding RNA 654, humanhuman

TSL 1 (best) BASIC

Gene LINC00654, Length 6,113 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00654-201ENST00000379053 SLC7A14Q8TBB6 771 aa11.52□□□□□ -0.57
LINC00654-201ENST00000379053 POLR3CQ9BUI4 534 aaPredicted RBP11.52□□□□□ -0.57
LINC00654-201ENST00000379053 ABHD10Q9NUJ1 306 aa11.52□□□□□ -0.57
LINC00654-201ENST00000379053 H7C4K7 107 aa11.51□□□□□ -0.57
LINC00654-201ENST00000379053 TBX3O15119 743 aa11.51□□□□□ -0.57
LINC00654-201ENST00000379053 CTIFO43310 598 aaKnown RBP11.51□□□□□ -0.57
LINC00654-201ENST00000379053 URODP06132 367 aa11.51□□□□□ -0.57
LINC00654-201ENST00000379053 KITP10721 976 aa11.51□□□□□ -0.57
LINC00654-201ENST00000379053 EIF3EP60228 445 aaKnown RBP11.51□□□□□ -0.57
LINC00654-201ENST00000379053 SNRNP35Q16560 246 aaKnown RBP11.51□□□□□ -0.57
LINC00654-201ENST00000379053 HIPK4Q8NE63 616 aa11.51□□□□□ -0.57
LINC00654-201ENST00000379053 SCFD1Q8WVM8 642 aa11.51□□□□□ -0.57
LINC00654-201ENST00000379053 FAM96AQ9H5X1 160 aa11.51□□□□□ -0.57
LINC00654-201ENST00000379053 IQSEC2Q5JU85 1478 aa11.51□□□□□ -0.57
LINC00654-201ENST00000379053 FRMD3A2A2Y4 597 aa11.51□□□□□ -0.57
LINC00654-201ENST00000379053 TLR2O60603 784 aa11.51□□□□□ -0.57
LINC00654-201ENST00000379053 NUGGCQ68CJ6 796 aa11.51□□□□□ -0.57
LINC00654-201ENST00000379053 TAAR1Q96RJ0 339 aa11.51□□□□□ -0.57
LINC00654-201ENST00000379053 WNT8AQ9H1J5 351 aa11.51□□□□□ -0.57
LINC00654-201ENST00000379053 FAF1Q9UNN5 650 aaPredicted RBP11.51□□□□□ -0.57
LINC00654-201ENST00000379053 IPPQ9Y573 584 aa11.51□□□□□ -0.57
LINC00654-201ENST00000379053 SHROOM2Q13796 1616 aa11.51□□□□□ -0.57
LINC00654-201ENST00000379053 NDUFS3O75489 264 aa11.51□□□□□ -0.57
LINC00654-201ENST00000379053 ODC1P11926 461 aa11.51□□□□□ -0.57
LINC00654-201ENST00000379053 SCP2P22307 547 aa11.51□□□□□ -0.57
LINC00654-201ENST00000379053 TAF6P49848 677 aa11.51□□□□□ -0.57
LINC00654-201ENST00000379053 SH3BGRP55822 239 aaPredicted RBP11.51□□□□□ -0.57
LINC00654-201ENST00000379053 RPS6P62753 249 aaKnown RBP11.51□□□□□ -0.57
LINC00654-201ENST00000379053 PDAP1Q13442 181 aaKnown RBP11.51□□□□□ -0.57
LINC00654-201ENST00000379053 HSP90AA5PQ58FG0 334 aa11.51□□□□□ -0.57
LINC00654-201ENST00000379053 USP50Q70EL3 339 aaPredicted RBP11.51□□□□□ -0.57
LINC00654-201ENST00000379053 DEFB128Q7Z7B8 93 aa11.51□□□□□ -0.57
LINC00654-201ENST00000379053 MORC4Q8TE76 937 aa11.51□□□□□ -0.57
LINC00654-201ENST00000379053 MRPS31Q92665 395 aaKnown RBP11.51□□□□□ -0.57
LINC00654-201ENST00000379053 L3MBTL3Q96JM7 780 aaPredicted RBP11.51□□□□□ -0.57
LINC00654-201ENST00000379053 AGPAT1Q99943 283 aa11.51□□□□□ -0.57
LINC00654-201ENST00000379053 TMEM39AQ9NV64 488 aa11.51□□□□□ -0.57
LINC00654-201ENST00000379053 AKAP7Q9P0M2 348 aaPredicted RBP11.51□□□□□ -0.57
LINC00654-201ENST00000379053 SEC23IPQ9Y6Y8 1000 aaKnown RBP11.51□□□□□ -0.57
LINC00654-201ENST00000379053 TULP4Q9NRJ4 1543 aa11.51□□□□□ -0.57
LINC00654-201ENST00000379053 ZSCAN9O15535 394 aaPredicted RBP11.51□□□□□ -0.57
LINC00654-201ENST00000379053 PDHBP11177 359 aa11.51□□□□□ -0.57
LINC00654-201ENST00000379053 PKN3Q6P5Z2 889 aa11.51□□□□□ -0.57
LINC00654-201ENST00000379053 TAGAPQ8N103 731 aa11.51□□□□□ -0.57
LINC00654-201ENST00000379053 THOC1Q96FV9 657 aaKnown RBP11.51□□□□□ -0.57
LINC00654-201ENST00000379053 UNC45AQ9H3U1 944 aa11.51□□□□□ -0.57
LINC00654-201ENST00000379053 HMX1Q9NP08 348 aaPredicted RBP11.51□□□□□ -0.57
LINC00654-201ENST00000379053 KLK14Q9P0G3 267 aa11.51□□□□□ -0.57
LINC00654-201ENST00000379053 ZFATQ9P243 1243 aa11.51□□□□□ -0.57
LINC00654-201ENST00000379053 TRIM33Q9UPN9 1127 aa11.51□□□□□ -0.57
LINC00654-201ENST00000379053 PPP2R3BQ9Y5P8 575 aa11.51□□□□□ -0.57
LINC00654-201ENST00000379053 PLA2R1Q13018 1463 aa11.51□□□□□ -0.57
LINC00654-201ENST00000379053 H0Y626 953 aa11.51□□□□□ -0.57
LINC00654-201ENST00000379053 KCNN4O15554 427 aa11.51□□□□□ -0.57
LINC00654-201ENST00000379053 KDM1AO60341 852 aa11.51□□□□□ -0.57
LINC00654-201ENST00000379053 PYGBP11216 843 aa11.51□□□□□ -0.57
LINC00654-201ENST00000379053 RASA1P20936 1047 aa11.51□□□□□ -0.57
LINC00654-201ENST00000379053 EIF2B5Q13144 721 aaKnown RBP11.51□□□□□ -0.57
LINC00654-201ENST00000379053 COBLL1Q53SF7 1204 aa11.51□□□□□ -0.57
LINC00654-201ENST00000379053 ZC3H12BQ5HYM0 836 aaKnown RBP11.51□□□□□ -0.57
LINC00654-201ENST00000379053 MAP1SQ66K74 1059 aaPredicted RBP11.51□□□□□ -0.57
LINC00654-201ENST00000379053 SYT2Q8N9I0 419 aaPredicted RBP11.51□□□□□ -0.57
LINC00654-201ENST00000379053 RBBP8NLQ8NC74 664 aaPredicted RBP11.51□□□□□ -0.57
LINC00654-201ENST00000379053 ANLNQ9NQW6 1124 aa11.51□□□□□ -0.57
LINC00654-201ENST00000379053 CHCHD3Q9NX63 227 aaKnown RBP11.51□□□□□ -0.57
LINC00654-201ENST00000379053 INTUQ9ULD6 942 aa11.51□□□□□ -0.57
LINC00654-201ENST00000379053 HMOX2P30519 316 aa11.5□□□□□ -0.57
LINC00654-201ENST00000379053 ACADSBP45954 432 aa11.5□□□□□ -0.57
LINC00654-201ENST00000379053 MDM2Q00987 491 aaPredicted RBP11.5□□□□□ -0.57
LINC00654-201ENST00000379053 MTBPQ96DY7 904 aa11.5□□□□□ -0.57
LINC00654-201ENST00000379053 REEP2Q9BRK0 252 aa11.5□□□□□ -0.57
LINC00654-201ENST00000379053 PITPNM3Q9BZ71 974 aa11.5□□□□□ -0.57
LINC00654-201ENST00000379053 CATSPERBQ9H7T0 1116 aa11.5□□□□□ -0.57
LINC00654-201ENST00000379053 ZC3H11AO75152 810 aaKnown RBP eCLIP11.5□□□□□ -0.57
LINC00654-201ENST00000379053 PNPLA4P41247 253 aa11.5□□□□□ -0.57
LINC00654-201ENST00000379053 HS6ST3Q8IZP7 471 aa11.5□□□□□ -0.57
LINC00654-201ENST00000379053 ARHGAP18Q8N392 663 aa11.5□□□□□ -0.57
LINC00654-201ENST00000379053 RIT2Q99578 217 aa11.5□□□□□ -0.57
LINC00654-201ENST00000379053 STN1Q9H668 368 aaKnown RBP11.5□□□□□ -0.57
LINC00654-201ENST00000379053 THEGQ9P2T0 379 aa11.5□□□□□ -0.57
LINC00654-201ENST00000379053 SLC16A3O15427 465 aaKnown RBP11.5□□□□□ -0.57
LINC00654-201ENST00000379053 GRAP2O75791 330 aa11.5□□□□□ -0.57
LINC00654-201ENST00000379053 MAPRE1Q15691 268 aaKnown RBP11.5□□□□□ -0.57
LINC00654-201ENST00000379053 PCSK7Q16549 785 aa11.5□□□□□ -0.57
LINC00654-201ENST00000379053 LRRC37BQ96QE4 947 aa11.5□□□□□ -0.57
LINC00654-201ENST00000379053 SLC13A1Q9BZW2 595 aa11.5□□□□□ -0.57
LINC00654-201ENST00000379053 MROH8Q9H579 483 aa11.5□□□□□ -0.57
LINC00654-201ENST00000379053 KCNH7Q9NS40 1196 aa11.5□□□□□ -0.57
LINC00654-201ENST00000379053 KLHL11Q9NVR0 708 aa11.5□□□□□ -0.57
LINC00654-201ENST00000379053 KCND2Q9NZV8 630 aa11.5□□□□□ -0.57
LINC00654-201ENST00000379053 SLC25A13Q9UJS0 675 aa11.5□□□□□ -0.57
LINC00654-201ENST00000379053 RRP15Q9Y3B9 282 aaKnown RBP11.5□□□□□ -0.57
LINC00654-201ENST00000379053 AP3B1O00203 1094 aa11.5□□□□□ -0.57
LINC00654-201ENST00000379053 MAPK13O15264 365 aa11.5□□□□□ -0.57
LINC00654-201ENST00000379053 DIAPH2O60879 1101 aa11.5□□□□□ -0.57
LINC00654-201ENST00000379053 B3GAT3O94766 335 aa11.5□□□□□ -0.57
LINC00654-201ENST00000379053 CKMP06732 381 aa11.5□□□□□ -0.57
LINC00654-201ENST00000379053 PGK2P07205 417 aa11.5□□□□□ -0.57
LINC00654-201ENST00000379053 GUCY1A2P33402 732 aa11.5□□□□□ -0.57
LINC00654-201ENST00000379053 TMC7Q7Z402 723 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms