RNA–Protein interactions for RNA: ENST00000378526.8

LIG3-202, Transcript of DNA ligase 3, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene LIG3, Length 8,400 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-202ENST00000378526 EPN2O95208 641 aa9.15□□□□□ -0.95
LIG3-202ENST00000378526 EIF3EP60228 445 aaKnown RBP9.15□□□□□ -0.95
LIG3-202ENST00000378526 LRRC74BQ6ZQY2 392 aa9.15□□□□□ -0.95
LIG3-202ENST00000378526 EXT2Q93063 718 aa9.15□□□□□ -0.95
LIG3-202ENST00000378526 SLC6A15Q9H2J7 730 aa9.15□□□□□ -0.95
LIG3-202ENST00000378526 RXFP1Q9HBX9 757 aa9.15□□□□□ -0.95
LIG3-202ENST00000378526 EPB41L4AQ9HCS5 686 aaPredicted RBP9.15□□□□□ -0.95
LIG3-202ENST00000378526 CASS4Q9NQ75 786 aa9.15□□□□□ -0.95
LIG3-202ENST00000378526 POLR3EQ9NVU0 708 aa9.15□□□□□ -0.95
LIG3-202ENST00000378526 C2CD2Q9Y426 696 aa9.15□□□□□ -0.95
LIG3-202ENST00000378526 SNX14Q9Y5W7 946 aa9.15□□□□□ -0.95
LIG3-202ENST00000378526 TRIM64CA6NLI5 447 aa9.14□□□□□ -0.95
LIG3-202ENST00000378526 K7ERI5 159 aa9.14□□□□□ -0.95
LIG3-202ENST00000378526 GET4Q7L5D6 327 aaPredicted RBP9.14□□□□□ -0.95
LIG3-202ENST00000378526 BNIPLQ7Z465 357 aa9.14□□□□□ -0.95
LIG3-202ENST00000378526 SLITRK2Q9H156 845 aa9.14□□□□□ -0.95
LIG3-202ENST00000378526 ZCCHC17Q9NP64 241 aaKnown RBP9.14□□□□□ -0.95
LIG3-202ENST00000378526 ARHGAP5Q13017 1502 aa9.14□□□□□ -0.95
LIG3-202ENST00000378526 NSUN2Q08J23 767 aaKnown RBP eCLIP9.14□□□□□ -0.95
LIG3-202ENST00000378526 KCNB1Q14721 858 aa9.14□□□□□ -0.95
LIG3-202ENST00000378526 CHMP1BQ7LBR1 199 aa9.14□□□□□ -0.95
LIG3-202ENST00000378526 LCORLQ8N3X6 602 aa9.14□□□□□ -0.95
LIG3-202ENST00000378526 XPO7Q9UIA9 1087 aaKnown RBP9.14□□□□□ -0.95
LIG3-202ENST00000378526 ZNF222Q9UK12 451 aa9.14□□□□□ -0.95
LIG3-202ENST00000378526 HPCAL4Q9UM19 191 aa9.14□□□□□ -0.95
LIG3-202ENST00000378526 ZMYM4Q5VZL5 1548 aa9.14□□□□□ -0.95
LIG3-202ENST00000378526 POLR3AO14802 1390 aaPredicted RBP9.14□□□□□ -0.95
LIG3-202ENST00000378526 PI4K2BG5E9Z4 385 aa9.14□□□□□ -0.95
LIG3-202ENST00000378526 KRT34O76011 436 aa9.14□□□□□ -0.95
LIG3-202ENST00000378526 NOL4O94818 638 aa9.14□□□□□ -0.95
LIG3-202ENST00000378526 RHAGQ02094 409 aa9.14□□□□□ -0.95
LIG3-202ENST00000378526 CHRNB3Q05901 458 aa9.14□□□□□ -0.95
LIG3-202ENST00000378526 CBX3Q13185 183 aa9.14□□□□□ -0.95
LIG3-202ENST00000378526 PKN3Q6P5Z2 889 aa9.14□□□□□ -0.95
LIG3-202ENST00000378526 HNRNPLLQ8WVV9 542 aaKnown RBP9.14□□□□□ -0.95
LIG3-202ENST00000378526 P2RX5Q93086 422 aa9.14□□□□□ -0.95
LIG3-202ENST00000378526 ZNF221Q9UK13 617 aa9.14□□□□□ -0.95
LIG3-202ENST00000378526 ABCG2Q9UNQ0 655 aa9.14□□□□□ -0.95
LIG3-202ENST00000378526 AIM2O14862 343 aa9.14□□□□□ -0.95
LIG3-202ENST00000378526 FARP2O94887 1054 aaPredicted RBP9.14□□□□□ -0.95
LIG3-202ENST00000378526 ANXA11P50995 505 aaKnown RBP9.14□□□□□ -0.95
LIG3-202ENST00000378526 ARF3P61204 181 aaPredicted RBP9.14□□□□□ -0.95
LIG3-202ENST00000378526 DYNLT1P63172 113 aa9.14□□□□□ -0.95
LIG3-202ENST00000378526 ARF1P84077 181 aaKnown RBP9.14□□□□□ -0.95
LIG3-202ENST00000378526 ARF5P84085 180 aa9.14□□□□□ -0.95
LIG3-202ENST00000378526 PGBD2Q6P3X8 592 aa9.14□□□□□ -0.95
LIG3-202ENST00000378526 RAB42Q8N4Z0 105 aa9.14□□□□□ -0.95
LIG3-202ENST00000378526 SPATA5Q8NB90 893 aa9.14□□□□□ -0.95
LIG3-202ENST00000378526 OR7A2PQ8NGA2 310 aa9.14□□□□□ -0.95
LIG3-202ENST00000378526 ACAT2Q9BWD1 397 aa9.14□□□□□ -0.95
LIG3-202ENST00000378526 METTL5Q9NRN9 209 aaKnown RBP9.14□□□□□ -0.95
LIG3-202ENST00000378526 ABHD10Q9NUJ1 306 aa9.14□□□□□ -0.95
LIG3-202ENST00000378526 SLC12A4Q9UP95 1085 aa9.14□□□□□ -0.95
LIG3-202ENST00000378526 GSAPA4D1B5 854 aa9.14□□□□□ -0.95
LIG3-202ENST00000378526 COBLO75128 1261 aa9.14□□□□□ -0.95
LIG3-202ENST00000378526 RPS2P15880 293 aaKnown RBP9.14□□□□□ -0.95
LIG3-202ENST00000378526 ALCAMQ13740 583 aa9.14□□□□□ -0.95
LIG3-202ENST00000378526 IZUMO2Q6UXV1 221 aa9.14□□□□□ -0.95
LIG3-202ENST00000378526 ZBED8Q8IZ13 594 aa9.14□□□□□ -0.95
LIG3-202ENST00000378526 HES6Q96HZ4 224 aa9.14□□□□□ -0.95
LIG3-202ENST00000378526 FAM227BQ96M60 508 aa9.14□□□□□ -0.95
LIG3-202ENST00000378526 TMEM165Q9HC07 324 aa9.14□□□□□ -0.95
LIG3-202ENST00000378526 MLXIPLQ9NP71 852 aa9.14□□□□□ -0.95
LIG3-202ENST00000378526 LMCD1Q9NZU5 365 aa9.14□□□□□ -0.95
LIG3-202ENST00000378526 ZNF197O14709 1029 aa9.14□□□□□ -0.95
LIG3-202ENST00000378526 MDM4O15151 490 aa9.14□□□□□ -0.95
LIG3-202ENST00000378526 PGDP52209 483 aa9.14□□□□□ -0.95
LIG3-202ENST00000378526 ZRANB3Q5FWF4 1079 aa9.14□□□□□ -0.95
LIG3-202ENST00000378526 SCARA3Q6AZY7 606 aa9.14□□□□□ -0.95
LIG3-202ENST00000378526 ZNF654Q8IZM8 581 aa9.14□□□□□ -0.95
LIG3-202ENST00000378526 RDM1Q8NG50 284 aa9.14□□□□□ -0.95
LIG3-202ENST00000378526 CABLES1Q8TDN4 633 aa9.14□□□□□ -0.95
LIG3-202ENST00000378526 C7orf25Q9BPX7 421 aa9.14□□□□□ -0.95
LIG3-202ENST00000378526 ECSITQ9BQ95 431 aa9.14□□□□□ -0.95
LIG3-202ENST00000378526 MMTAG2Q9BU76 263 aaKnown RBP9.14□□□□□ -0.95
LIG3-202ENST00000378526 WWP2O00308 870 aa9.13□□□□□ -0.95
LIG3-202ENST00000378526 MYCP01106 439 aaPredicted RBP9.13□□□□□ -0.95
LIG3-202ENST00000378526 HSMCR30P0CW71 290 aa9.13□□□□□ -0.95
LIG3-202ENST00000378526 MYL12AP19105 171 aa9.13□□□□□ -0.95
LIG3-202ENST00000378526 TRHP20396 242 aaPredicted RBP9.13□□□□□ -0.95
LIG3-202ENST00000378526 NR2F2P24468 414 aa9.13□□□□□ -0.95
LIG3-202ENST00000378526 FNTAP49354 379 aa9.13□□□□□ -0.95
LIG3-202ENST00000378526 RPS6KA3P51812 740 aa9.13□□□□□ -0.95
LIG3-202ENST00000378526 NUMA1Q14980 2115 aa9.13□□□□□ -0.95
LIG3-202ENST00000378526 STXBP2Q15833 593 aa9.13□□□□□ -0.95
LIG3-202ENST00000378526 ULK2Q8IYT8 1036 aa9.13□□□□□ -0.95
LIG3-202ENST00000378526 TBC1D19Q8N5T2 526 aa9.13□□□□□ -0.95
LIG3-202ENST00000378526 KCTD4Q8WVF5 259 aa9.13□□□□□ -0.95
LIG3-202ENST00000378526 COX4I2Q96KJ9 171 aa9.13□□□□□ -0.95
LIG3-202ENST00000378526 MAGEB16A2A368 324 aa9.13□□□□□ -0.95
LIG3-202ENST00000378526 PI4KAP2A4QPH2 592 aa9.13□□□□□ -0.95
LIG3-202ENST00000378526 OR14I1A6ND48 311 aa9.13□□□□□ -0.95
LIG3-202ENST00000378526 C6orf229H3BNL8 230 aa9.13□□□□□ -0.95
LIG3-202ENST00000378526 KPNA3O00505 521 aaPredicted RBP9.13□□□□□ -0.95
LIG3-202ENST00000378526 PEX14O75381 377 aa9.13□□□□□ -0.95
LIG3-202ENST00000378526 GHRP10912 638 aa9.13□□□□□ -0.95
LIG3-202ENST00000378526 ITIH1P19827 911 aa9.13□□□□□ -0.95
LIG3-202ENST00000378526 KCNK10P57789 538 aa9.13□□□□□ -0.95
LIG3-202ENST00000378526 HPCAP84074 193 aa9.13□□□□□ -0.95
LIG3-202ENST00000378526 UGP2Q16851 508 aa9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms