RNA–Protein interactions for RNA: ENST00000378505.6

RPGR-203, Transcript of retinitis pigmentosa GTPase regulator, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene RPGR, Length 4,767 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPGR-203ENST00000378505 USP15Q9Y4E8 981 aaPredicted RBP11.91□□□□□ -0.5
RPGR-203ENST00000378505 CFAP69A5D8W1 941 aa11.91□□□□□ -0.5
RPGR-203ENST00000378505 PHF20L1A8MW92 1017 aa11.91□□□□□ -0.5
RPGR-203ENST00000378505 PID1Q7Z2X4 250 aa11.91□□□□□ -0.5
RPGR-203ENST00000378505 SLC13A5Q86YT5 568 aaPredicted RBP11.91□□□□□ -0.5
RPGR-203ENST00000378505 BTBD6Q96KE9 485 aa11.91□□□□□ -0.5
RPGR-203ENST00000378505 FBXO28Q9NVF7 368 aa11.91□□□□□ -0.5
RPGR-203ENST00000378505 DBR1Q9UK59 544 aaKnown RBP11.91□□□□□ -0.5
RPGR-203ENST00000378505 FAF1Q9UNN5 650 aaPredicted RBP11.91□□□□□ -0.5
RPGR-203ENST00000378505 TRIM33Q9UPN9 1127 aa11.91□□□□□ -0.5
RPGR-203ENST00000378505 HERVK_113P62684 666 aa11.91□□□□□ -0.5
RPGR-203ENST00000378505 AP1B1Q10567 949 aa11.91□□□□□ -0.5
RPGR-203ENST00000378505 C1orf146Q5VVC0 180 aa11.91□□□□□ -0.5
RPGR-203ENST00000378505 MCEEQ96PE7 176 aa11.91□□□□□ -0.5
RPGR-203ENST00000378505 INPP5FQ9Y2H2 1132 aa11.91□□□□□ -0.5
RPGR-203ENST00000378505 POLRMTO00411 1230 aaKnown RBP11.91□□□□□ -0.5
RPGR-203ENST00000378505 MAGEB2O15479 319 aa11.91□□□□□ -0.5
RPGR-203ENST00000378505 KITP10721 976 aa11.91□□□□□ -0.5
RPGR-203ENST00000378505 PPARGP37231 505 aaPredicted RBP11.91□□□□□ -0.5
RPGR-203ENST00000378505 FNTAP49354 379 aa11.91□□□□□ -0.5
RPGR-203ENST00000378505 C2orf69Q8N8R5 385 aa11.91□□□□□ -0.5
RPGR-203ENST00000378505 SCFD1Q8WVM8 642 aa11.91□□□□□ -0.5
RPGR-203ENST00000378505 GMCL1Q96IK5 515 aa11.91□□□□□ -0.5
RPGR-203ENST00000378505 TARS2Q9BW92 718 aaKnown RBP11.91□□□□□ -0.5
RPGR-203ENST00000378505 WWP1Q9H0M0 922 aa11.91□□□□□ -0.5
RPGR-203ENST00000378505 THAP2Q9H0W7 228 aa11.91□□□□□ -0.5
RPGR-203ENST00000378505 DMGDHQ9UI17 866 aaKnown RBP11.91□□□□□ -0.5
RPGR-203ENST00000378505 TBX20Q9UMR3 447 aa11.91□□□□□ -0.5
RPGR-203ENST00000378505 DCCP43146 1447 aa11.9□□□□□ -0.5
RPGR-203ENST00000378505 FAM47DPA6NHR8 397 aa11.9□□□□□ -0.5
RPGR-203ENST00000378505 GNGT2O14610 69 aa11.9□□□□□ -0.5
RPGR-203ENST00000378505 ATMINO43313 823 aaPredicted RBP11.9□□□□□ -0.5
RPGR-203ENST00000378505 TRPA1O75762 1119 aa11.9□□□□□ -0.5
RPGR-203ENST00000378505 FAM107AO95990 144 aa11.9□□□□□ -0.5
RPGR-203ENST00000378505 ICAM1P05362 532 aa11.9□□□□□ -0.5
RPGR-203ENST00000378505 CASP4P49662 377 aa11.9□□□□□ -0.5
RPGR-203ENST00000378505 CENPCQ03188 943 aa11.9□□□□□ -0.5
RPGR-203ENST00000378505 DEUP1Q05D60 604 aa11.9□□□□□ -0.5
RPGR-203ENST00000378505 SLC12A1Q13621 1099 aa11.9□□□□□ -0.5
RPGR-203ENST00000378505 CCNYL1Q8N7R7 359 aa11.9□□□□□ -0.5
RPGR-203ENST00000378505 GPRASP2Q96D09 838 aa11.9□□□□□ -0.5
RPGR-203ENST00000378505 NIF3L1Q9GZT8 377 aa11.9□□□□□ -0.5
RPGR-203ENST00000378505 UNC45AQ9H3U1 944 aa11.9□□□□□ -0.5
RPGR-203ENST00000378505 SMAPO00193 183 aa11.9□□□□□ -0.5
RPGR-203ENST00000378505 PPP1R12AO14974 1030 aaPredicted RBP11.9□□□□□ -0.5
RPGR-203ENST00000378505 DIAPH2O60879 1101 aa11.9□□□□□ -0.5
RPGR-203ENST00000378505 COILP38432 576 aaPredicted RBP11.9□□□□□ -0.5
RPGR-203ENST00000378505 MAPK7Q13164 816 aa11.9□□□□□ -0.5
RPGR-203ENST00000378505 SLC29A2Q14542 456 aa11.9□□□□□ -0.5
RPGR-203ENST00000378505 ACER1Q8TDN7 264 aa11.9□□□□□ -0.5
RPGR-203ENST00000378505 RAB6BQ9NRW1 208 aa11.9□□□□□ -0.5
RPGR-203ENST00000378505 ZFATQ9P243 1243 aa11.9□□□□□ -0.5
RPGR-203ENST00000378505 SNX9Q9Y5X1 595 aa11.9□□□□□ -0.5
RPGR-203ENST00000378505 APRTP07741 180 aa11.9□□□□□ -0.5
RPGR-203ENST00000378505 GYS1P13807 737 aa11.9□□□□□ -0.5
RPGR-203ENST00000378505 HSD17B3P37058 310 aa11.9□□□□□ -0.5
RPGR-203ENST00000378505 SEC24CP53992 1094 aa11.9□□□□□ -0.5
RPGR-203ENST00000378505 CDC42EP1Q00587 391 aa11.9□□□□□ -0.5
RPGR-203ENST00000378505 TBX2Q13207 712 aaPredicted RBP11.9□□□□□ -0.5
RPGR-203ENST00000378505 ATG4CQ96DT6 458 aa11.9□□□□□ -0.5
RPGR-203ENST00000378505 SEC16BQ96JE7 1060 aa11.9□□□□□ -0.5
RPGR-203ENST00000378505 TAAR1Q96RJ0 339 aa11.9□□□□□ -0.5
RPGR-203ENST00000378505 ZSWIM1Q9BR11 485 aa11.9□□□□□ -0.5
RPGR-203ENST00000378505 IL17RBQ9NRM6 502 aa11.9□□□□□ -0.5
RPGR-203ENST00000378505 PSMC3IPQ9P2W1 217 aaPredicted RBP11.9□□□□□ -0.5
RPGR-203ENST00000378505 SUN2Q9UH99 717 aa11.9□□□□□ -0.5
RPGR-203ENST00000378505 KCNN4O15554 427 aa11.9□□□□□ -0.51
RPGR-203ENST00000378505 HNRNPCL1O60812 293 aaKnown RBP11.9□□□□□ -0.51
RPGR-203ENST00000378505 MAGEA4P43358 317 aa11.9□□□□□ -0.51
RPGR-203ENST00000378505 EN1Q05925 392 aaPredicted RBP11.9□□□□□ -0.51
RPGR-203ENST00000378505 TSTA3Q13630 321 aaPredicted RBP11.9□□□□□ -0.51
RPGR-203ENST00000378505 IER5Q5VY09 327 aa11.9□□□□□ -0.51
RPGR-203ENST00000378505 AP1ARQ63HQ0 302 aa11.9□□□□□ -0.51
RPGR-203ENST00000378505 ACAD10Q6JQN1 1059 aa11.9□□□□□ -0.51
RPGR-203ENST00000378505 TEX2Q8IWB9 1127 aa11.9□□□□□ -0.51
RPGR-203ENST00000378505 ST13P4Q8IZP2 240 aaPredicted RBP11.9□□□□□ -0.51
RPGR-203ENST00000378505 FEZF2Q8TBJ5 459 aa11.9□□□□□ -0.51
RPGR-203ENST00000378505 ARHGEF26Q96DR7 871 aa11.9□□□□□ -0.51
RPGR-203ENST00000378505 PABPC3Q9H361 631 aaKnown RBP11.9□□□□□ -0.51
RPGR-203ENST00000378505 UBN1Q9NPG3 1134 aa11.9□□□□□ -0.51
RPGR-203ENST00000378505 FAM237AA0A1B0GTK4 181 aa11.89□□□□□ -0.51
RPGR-203ENST00000378505 CCDC195A0A1B0GUA6 201 aa11.89□□□□□ -0.51
RPGR-203ENST00000378505 NME3Q13232 169 aa11.89□□□□□ -0.51
RPGR-203ENST00000378505 TMEM132DQ14C87 1099 aa11.89□□□□□ -0.51
RPGR-203ENST00000378505 EPC2Q52LR7 807 aa11.89□□□□□ -0.51
RPGR-203ENST00000378505 AGBL3Q8NEM8 1001 aa11.89□□□□□ -0.51
RPGR-203ENST00000378505 FAM161BQ96MY7 647 aa11.89□□□□□ -0.51
RPGR-203ENST00000378505 PI4K2AQ9BTU6 479 aa11.89□□□□□ -0.51
RPGR-203ENST00000378505 SMYD3Q9H7B4 428 aa11.89□□□□□ -0.51
RPGR-203ENST00000378505 GTPBP10A4D1E9 387 aaKnown RBP11.89□□□□□ -0.51
RPGR-203ENST00000378505 RGL2O15211 777 aa11.89□□□□□ -0.51
RPGR-203ENST00000378505 AKAP3O75969 853 aa11.89□□□□□ -0.51
RPGR-203ENST00000378505 GZMAP12544 262 aa11.89□□□□□ -0.51
RPGR-203ENST00000378505 ELF1P32519 619 aa11.89□□□□□ -0.51
RPGR-203ENST00000378505 PMS1P54277 932 aaKnown RBP11.89□□□□□ -0.51
RPGR-203ENST00000378505 TTC8Q8TAM2 541 aa11.89□□□□□ -0.51
RPGR-203ENST00000378505 CASKIN2Q8WXE0 1202 aa11.89□□□□□ -0.51
RPGR-203ENST00000378505 EXT2Q93063 718 aa11.89□□□□□ -0.51
RPGR-203ENST00000378505 TRIM62Q9BVG3 475 aa11.89□□□□□ -0.51
RPGR-203ENST00000378505 TMEM120BA0PK00 339 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms