RNA–Protein interactions for RNA: ENST00000377047.8

GPC6-201, Transcript of glypican 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC6, Length 6,467 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC6-201ENST00000377047 EXTL3O43909 919 aa14.36□□□□□ -0.11
GPC6-201ENST00000377047 PGK2P07205 417 aa14.36□□□□□ -0.11
GPC6-201ENST00000377047 ACTR2P61160 394 aa14.36□□□□□ -0.11
GPC6-201ENST00000377047 TBC1D1Q86TI0 1168 aaPredicted RBP14.36□□□□□ -0.11
GPC6-201ENST00000377047 YIPF2Q9BWQ6 316 aa14.36□□□□□ -0.11
GPC6-201ENST00000377047 WDR35Q9P2L0 1181 aa14.36□□□□□ -0.11
GPC6-201ENST00000377047 TYK2P29597 1187 aa14.36□□□□□ -0.11
GPC6-201ENST00000377047 NPEPPSP55786 919 aa14.36□□□□□ -0.11
GPC6-201ENST00000377047 RCOR2Q8IZ40 523 aa14.36□□□□□ -0.11
GPC6-201ENST00000377047 ANLNQ9NQW6 1124 aa14.36□□□□□ -0.11
GPC6-201ENST00000377047 AAASQ9NRG9 546 aa14.36□□□□□ -0.11
GPC6-201ENST00000377047 ESYT3A0FGR9 886 aa14.35□□□□□ -0.11
GPC6-201ENST00000377047 C3orf70A6NLC5 250 aaPredicted RBP14.35□□□□□ -0.11
GPC6-201ENST00000377047 E2F6O75461 281 aa14.35□□□□□ -0.11
GPC6-201ENST00000377047 SERPIND1P05546 499 aa14.35□□□□□ -0.11
GPC6-201ENST00000377047 SDE2Q6IQ49 451 aa14.35□□□□□ -0.11
GPC6-201ENST00000377047 ANKMY2Q8IV38 441 aa14.35□□□□□ -0.11
GPC6-201ENST00000377047 ACER1Q8TDN7 264 aa14.35□□□□□ -0.11
GPC6-201ENST00000377047 GPRASP2Q96D09 838 aa14.35□□□□□ -0.11
GPC6-201ENST00000377047 TSSK1BQ9BXA7 367 aa14.35□□□□□ -0.11
GPC6-201ENST00000377047 GBA2Q9HCG7 927 aaPredicted RBP14.35□□□□□ -0.11
GPC6-201ENST00000377047 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP14.35□□□□□ -0.111e-14■■■■■ 52.2
GPC6-201ENST00000377047 TRIM33Q9UPN9 1127 aa14.35□□□□□ -0.11
GPC6-201ENST00000377047 DIAPH2O60879 1101 aa14.35□□□□□ -0.11
GPC6-201ENST00000377047 DCTN3O75935 186 aa14.35□□□□□ -0.11
GPC6-201ENST00000377047 MAP4P27816 1152 aaKnown RBP14.35□□□□□ -0.11
GPC6-201ENST00000377047 GNL1P36915 607 aaPredicted RBP14.35□□□□□ -0.11
GPC6-201ENST00000377047 DPYDQ12882 1025 aa14.35□□□□□ -0.11
GPC6-201ENST00000377047 KRT80Q6KB66 452 aa14.35□□□□□ -0.11
GPC6-201ENST00000377047 ERO1BQ86YB8 467 aa14.35□□□□□ -0.11
GPC6-201ENST00000377047 CXorf38Q8TB03 319 aa14.35□□□□□ -0.11
GPC6-201ENST00000377047 CLMNQ96JQ2 1002 aa14.35□□□□□ -0.11
GPC6-201ENST00000377047 ANTXR2P58335 489 aa14.35□□□□□ -0.11
GPC6-201ENST00000377047 ARHGAP15Q53QZ3 475 aa14.35□□□□□ -0.11
GPC6-201ENST00000377047 KIFC3Q9BVG8 833 aa14.35□□□□□ -0.11
GPC6-201ENST00000377047 TRIM45Q9H8W5 580 aaPredicted RBP14.35□□□□□ -0.11
GPC6-201ENST00000377047 MDM2Q00987 491 aaPredicted RBP14.35□□□□□ -0.11
GPC6-201ENST00000377047 NCAPHQ15003 741 aa14.35□□□□□ -0.11
GPC6-201ENST00000377047 PAN2Q504Q3 1202 aaKnown RBP14.35□□□□□ -0.11
GPC6-201ENST00000377047 CDR2LQ86X02 465 aaPredicted RBP14.35□□□□□ -0.11
GPC6-201ENST00000377047 SLC26A7Q8TE54 656 aa14.35□□□□□ -0.11
GPC6-201ENST00000377047 CENPKQ9BS16 269 aa14.35□□□□□ -0.11
GPC6-201ENST00000377047 ABI2Q9NYB9 513 aaPredicted RBP14.35□□□□□ -0.11
GPC6-201ENST00000377047 ZNF197O14709 1029 aa14.35□□□□□ -0.11
GPC6-201ENST00000377047 ZNF189O75820 626 aaPredicted RBP14.35□□□□□ -0.11
GPC6-201ENST00000377047 LUC7L3O95232 432 aaKnown RBP14.35□□□□□ -0.11
GPC6-201ENST00000377047 ARHGEF7Q14155 803 aa14.35□□□□□ -0.11
GPC6-201ENST00000377047 MORF4L2Q15014 288 aa14.35□□□□□ -0.11
GPC6-201ENST00000377047 PCSK7Q16549 785 aa14.35□□□□□ -0.11
GPC6-201ENST00000377047 C10orf120Q5SQS8 335 aa14.35□□□□□ -0.11
GPC6-201ENST00000377047 FGFR1OP2Q9NVK5 253 aa14.35□□□□□ -0.11
GPC6-201ENST00000377047 CCDC78A2IDD5 438 aa14.35□□□□□ -0.11
GPC6-201ENST00000377047 FAM187AA6NFU0 413 aa14.35□□□□□ -0.11
GPC6-201ENST00000377047 HNRNPCL2B2RXH8 293 aa14.35□□□□□ -0.11
GPC6-201ENST00000377047 HNRNPCL1O60812 293 aaKnown RBP14.35□□□□□ -0.11
GPC6-201ENST00000377047 ARL4DP49703 201 aa14.35□□□□□ -0.11
GPC6-201ENST00000377047 PDIA6Q15084 440 aa14.35□□□□□ -0.11
GPC6-201ENST00000377047 PIP4K2CQ8TBX8 421 aa14.35□□□□□ -0.11
GPC6-201ENST00000377047 TEKT4Q8WW24 435 aa14.35□□□□□ -0.11
GPC6-201ENST00000377047 TMEM117Q9H0C3 514 aa14.35□□□□□ -0.11
GPC6-201ENST00000377047 RRAGCQ9HB90 399 aa14.35□□□□□ -0.11
GPC6-201ENST00000377047 NAGPAQ9UK23 515 aa14.35□□□□□ -0.11
GPC6-201ENST00000377047 STAG3L1P0CL83 205 aa14.34□□□□□ -0.11
GPC6-201ENST00000377047 HARS2P49590 506 aaKnown RBP14.34□□□□□ -0.11
GPC6-201ENST00000377047 RASIP1Q5U651 963 aa14.34□□□□□ -0.11
GPC6-201ENST00000377047 MFN1Q8IWA4 741 aa14.34□□□□□ -0.11
GPC6-201ENST00000377047 SLC35G2Q8TBE7 412 aa14.34□□□□□ -0.11
GPC6-201ENST00000377047 HPDLQ96IR7 371 aa14.34□□□□□ -0.11
GPC6-201ENST00000377047 EIF2AK3Q9NZJ5 1116 aaKnown RBP14.34□□□□□ -0.11
GPC6-201ENST00000377047 CPA4Q9UI42 421 aa14.34□□□□□ -0.11
GPC6-201ENST00000377047 ANGPTL2Q9UKU9 493 aa14.34□□□□□ -0.11
GPC6-201ENST00000377047 DCDC2CA8MYV0 355 aa14.34□□□□□ -0.11
GPC6-201ENST00000377047 KCNA2P16389 499 aa14.34□□□□□ -0.11
GPC6-201ENST00000377047 RNPC3Q96LT9 517 aaKnown RBP14.34□□□□□ -0.11
GPC6-201ENST00000377047 CYTH2Q99418 400 aa14.34□□□□□ -0.11
GPC6-201ENST00000377047 SMYD3Q9H7B4 428 aa14.34□□□□□ -0.11
GPC6-201ENST00000377047 ADGRG1Q9Y653 693 aa14.34□□□□□ -0.11
GPC6-201ENST00000377047 LMTK2Q8IWU2 1503 aa14.34□□□□□ -0.11
GPC6-201ENST00000377047 DCAF6Q58WW2 860 aa14.34□□□□□ -0.11
GPC6-201ENST00000377047 PI4K2AQ9BTU6 479 aa14.34□□□□□ -0.11
GPC6-201ENST00000377047 ANKEF1Q9NU02 776 aa14.34□□□□□ -0.11
GPC6-201ENST00000377047 TLR2O60603 784 aa14.34□□□□□ -0.11
GPC6-201ENST00000377047 ITGB3P05106 788 aa14.34□□□□□ -0.11
GPC6-201ENST00000377047 CYP2C19P33261 490 aa14.34□□□□□ -0.11
GPC6-201ENST00000377047 ACADSBP45954 432 aa14.34□□□□□ -0.11
GPC6-201ENST00000377047 ADCK2Q7Z695 626 aa14.34□□□□□ -0.11
GPC6-201ENST00000377047 FBXO16Q8IX29 292 aaPredicted RBP14.34□□□□□ -0.11
GPC6-201ENST00000377047 FBXO41Q8TF61 875 aa14.34□□□□□ -0.11
GPC6-201ENST00000377047 L3MBTL3Q96JM7 780 aaPredicted RBP14.34□□□□□ -0.11
GPC6-201ENST00000377047 TARS2Q9BW92 718 aaKnown RBP14.34□□□□□ -0.11
GPC6-201ENST00000377047 BACE1P56817 501 aa14.34□□□□□ -0.11
GPC6-201ENST00000377047 MAGOHP61326 146 aaKnown RBP14.34□□□□□ -0.11
GPC6-201ENST00000377047 HIF1AQ16665 826 aa14.34□□□□□ -0.11
GPC6-201ENST00000377047 ACBD5Q5T8D3 534 aaPredicted RBP14.34□□□□□ -0.11
GPC6-201ENST00000377047 NUDCD3Q8IVD9 361 aa14.34□□□□□ -0.11
GPC6-201ENST00000377047 ADSSL1Q8N142 457 aa14.34□□□□□ -0.11
GPC6-201ENST00000377047 OPTNQ96CV9 577 aa14.34□□□□□ -0.11
GPC6-201ENST00000377047 COLEC11Q9BWP8 271 aa14.34□□□□□ -0.11
GPC6-201ENST00000377047 ZFATQ9P243 1243 aa14.34□□□□□ -0.11
GPC6-201ENST00000377047 SPAG7O75391 227 aa14.33□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms