RNA–Protein interactions for RNA: ENST00000374943.8

HLA-DQB1-201, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,656 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-201ENST00000374943 RGMBQ6NW40 437 aa19.3■□□□□ 0.68
HLA-DQB1-201ENST00000374943 C17orf99Q6UX52 265 aa19.3■□□□□ 0.68
HLA-DQB1-201ENST00000374943 FDXACB1Q9BRP7 624 aaPredicted RBP19.3■□□□□ 0.68
HLA-DQB1-201ENST00000374943 SELENOOQ9BVL4 669 aa19.3■□□□□ 0.68
HLA-DQB1-201ENST00000374943 SMARCAL1Q9NZC9 954 aa19.3■□□□□ 0.68
HLA-DQB1-201ENST00000374943 GNEQ9Y223 722 aaKnown RBP19.3■□□□□ 0.68
HLA-DQB1-201ENST00000374943 AKT3Q9Y243 479 aa19.3■□□□□ 0.68
HLA-DQB1-201ENST00000374943 NUB1Q9Y5A7 615 aa19.3■□□□□ 0.68
HLA-DQB1-201ENST00000374943 RRN3P2A6NIE6 340 aa19.3■□□□□ 0.68
HLA-DQB1-201ENST00000374943 SLC10A3P09131 477 aa19.3■□□□□ 0.68
HLA-DQB1-201ENST00000374943 INHBEP58166 350 aa19.3■□□□□ 0.68
HLA-DQB1-201ENST00000374943 KYAT1Q16773 422 aa19.3■□□□□ 0.68
HLA-DQB1-201ENST00000374943 SAPCD2Q86UD0 394 aa19.3■□□□□ 0.68
HLA-DQB1-201ENST00000374943 ZNF410Q86VK4 478 aa19.3■□□□□ 0.68
HLA-DQB1-201ENST00000374943 RASGEF1CQ8N431 466 aa19.3■□□□□ 0.68
HLA-DQB1-201ENST00000374943 USP38Q8NB14 1042 aa19.3■□□□□ 0.68
HLA-DQB1-201ENST00000374943 ZNF668Q96K58 619 aaPredicted RBP19.3■□□□□ 0.68
HLA-DQB1-201ENST00000374943 MTMR12Q9C0I1 747 aa19.3■□□□□ 0.68
HLA-DQB1-201ENST00000374943 RBM12Q9NTZ6 932 aaKnown RBP19.3■□□□□ 0.68
HLA-DQB1-201ENST00000374943 CTTNBP2NLQ9P2B4 639 aa19.3■□□□□ 0.68
HLA-DQB1-201ENST00000374943 TMEM59LQ9UK28 342 aa19.3■□□□□ 0.68
HLA-DQB1-201ENST00000374943 UNGP13051 313 aaPredicted RBP19.29■□□□□ 0.68
HLA-DQB1-201ENST00000374943 DNA2P51530 1060 aa19.29■□□□□ 0.68
HLA-DQB1-201ENST00000374943 TMEM132AQ24JP5 1023 aa19.29■□□□□ 0.68
HLA-DQB1-201ENST00000374943 OLFML2BQ68BL8 750 aa19.29■□□□□ 0.68
HLA-DQB1-201ENST00000374943 TRIM72Q6ZMU5 477 aa19.29■□□□□ 0.68
HLA-DQB1-201ENST00000374943 IFNL1Q8IU54 200 aa19.29■□□□□ 0.68
HLA-DQB1-201ENST00000374943 FUT8Q9BYC5 575 aa19.29■□□□□ 0.68
HLA-DQB1-201ENST00000374943 RNF216Q9NWF9 866 aaPredicted RBP19.29■□□□□ 0.68
HLA-DQB1-201ENST00000374943 UVRAGQ9P2Y5 699 aa19.29■□□□□ 0.68
HLA-DQB1-201ENST00000374943 TRIP11Q15643 1979 aa19.28■□□□□ 0.68
HLA-DQB1-201ENST00000374943 DDX3YO15523 660 aaKnown RBP19.28■□□□□ 0.68
HLA-DQB1-201ENST00000374943 F2P00734 622 aa19.28■□□□□ 0.68
HLA-DQB1-201ENST00000374943 ZNF865P0CJ78 1059 aaPredicted RBP19.28■□□□□ 0.68
HLA-DQB1-201ENST00000374943 ZNF132P52740 706 aa19.28■□□□□ 0.68
HLA-DQB1-201ENST00000374943 PDCD11Q14690 1871 aaKnown RBP19.28■□□□□ 0.68
HLA-DQB1-201ENST00000374943 SGSM1Q2NKQ1 1148 aa19.28■□□□□ 0.68
HLA-DQB1-201ENST00000374943 EFCAB13Q8IY85 973 aa19.28■□□□□ 0.68
HLA-DQB1-201ENST00000374943 THNSL1Q8IYQ7 743 aa19.28■□□□□ 0.68
HLA-DQB1-201ENST00000374943 PDZD7Q9H5P4 517 aa19.28■□□□□ 0.68
HLA-DQB1-201ENST00000374943 RPF1Q9H9Y2 349 aaKnown RBP19.28■□□□□ 0.68
HLA-DQB1-201ENST00000374943 TTC7AQ9ULT0 858 aaPredicted RBP19.28■□□□□ 0.68
HLA-DQB1-201ENST00000374943 PCDHB4Q9Y5E5 795 aa19.28■□□□□ 0.68
HLA-DQB1-201ENST00000374943 UMODL1Q5DID0 1318 aa19.28■□□□□ 0.68
HLA-DQB1-201ENST00000374943 GPR25O00155 361 aa19.27■□□□□ 0.68
HLA-DQB1-201ENST00000374943 PGRMC1O00264 195 aaKnown RBP19.27■□□□□ 0.68
HLA-DQB1-201ENST00000374943 CST3P01034 146 aaPredicted RBP19.27■□□□□ 0.68
HLA-DQB1-201ENST00000374943 IGHA2P01877 340 aa19.27■□□□□ 0.68
HLA-DQB1-201ENST00000374943 TNNC2P02585 160 aa19.27■□□□□ 0.68
HLA-DQB1-201ENST00000374943 VTNP04004 478 aa19.27■□□□□ 0.68
HLA-DQB1-201ENST00000374943 CYP1A1P04798 512 aaPredicted RBP19.27■□□□□ 0.68
HLA-DQB1-201ENST00000374943 TMEM191BP0C7N4 346 aa19.27■□□□□ 0.68
HLA-DQB1-201ENST00000374943 PPP1R2P3Q6NXS1 205 aa19.27■□□□□ 0.68
HLA-DQB1-201ENST00000374943 KIAA0319LQ8IZA0 1049 aa19.27■□□□□ 0.68
HLA-DQB1-201ENST00000374943 KRT222Q8N1A0 295 aa19.27■□□□□ 0.68
HLA-DQB1-201ENST00000374943 CEP120Q8N960 986 aa19.27■□□□□ 0.68
HLA-DQB1-201ENST00000374943 ZNF653Q96CK0 615 aa19.27■□□□□ 0.68
HLA-DQB1-201ENST00000374943 TRIM11Q96F44 468 aa19.27■□□□□ 0.68
HLA-DQB1-201ENST00000374943 ANKRD36BP1Q96IX9 119 aa19.27■□□□□ 0.68
HLA-DQB1-201ENST00000374943 RPS6KC1Q96S38 1066 aa19.27■□□□□ 0.68
HLA-DQB1-201ENST00000374943 LRRC1Q9BTT6 524 aa19.27■□□□□ 0.68
HLA-DQB1-201ENST00000374943 NIF3L1Q9GZT8 377 aa19.27■□□□□ 0.68
HLA-DQB1-201ENST00000374943 AVENQ9NQS1 362 aaPredicted RBP19.27■□□□□ 0.68
HLA-DQB1-201ENST00000374943 FLRT1Q9NZU1 646 aa19.27■□□□□ 0.68
HLA-DQB1-201ENST00000374943 L1RE1Q9UN81 338 aa19.27■□□□□ 0.68
HLA-DQB1-201ENST00000374943 TRIP12Q14669 1992 aaPredicted RBP19.27■□□□□ 0.68
HLA-DQB1-201ENST00000374943 MIF4GDA9UHW6 222 aaKnown RBP19.27■□□□□ 0.67
HLA-DQB1-201ENST00000374943 MAP2K7O14733 419 aa19.27■□□□□ 0.67
HLA-DQB1-201ENST00000374943 SASH3O75995 380 aa19.27■□□□□ 0.67
HLA-DQB1-201ENST00000374943 MYBL1P10243 752 aa19.27■□□□□ 0.67
HLA-DQB1-201ENST00000374943 CENPCQ03188 943 aa19.27■□□□□ 0.67
HLA-DQB1-201ENST00000374943 MAP9Q49MG5 647 aa19.27■□□□□ 0.67
HLA-DQB1-201ENST00000374943 TMEM270Q6UE05 265 aa19.27■□□□□ 0.67
HLA-DQB1-201ENST00000374943 RBBP8NLQ8NC74 664 aaPredicted RBP19.27■□□□□ 0.67
HLA-DQB1-201ENST00000374943 SOCS4Q8WXH5 440 aa19.27■□□□□ 0.67
HLA-DQB1-201ENST00000374943 FAM212AQ96EL1 285 aa19.27■□□□□ 0.67
HLA-DQB1-201ENST00000374943 FAXDC2Q96IV6 333 aa19.27■□□□□ 0.67
HLA-DQB1-201ENST00000374943 BUD13Q9BRD0 619 aaKnown RBP eCLIP19.27■□□□□ 0.67
HLA-DQB1-201ENST00000374943 CARD9Q9H257 536 aa19.27■□□□□ 0.67
HLA-DQB1-201ENST00000374943 PASKQ96RG2 1323 aa19.26■□□□□ 0.67
HLA-DQB1-201ENST00000374943 DYNC1LI2O43237 492 aaPredicted RBP19.26■□□□□ 0.67
HLA-DQB1-201ENST00000374943 CEP104O60308 925 aa19.26■□□□□ 0.67
HLA-DQB1-201ENST00000374943 CXCL8P10145 99 aa19.26■□□□□ 0.67
HLA-DQB1-201ENST00000374943 ARF4P18085 180 aaPredicted RBP19.26■□□□□ 0.67
HLA-DQB1-201ENST00000374943 TNFRSF8P28908 595 aa19.26■□□□□ 0.67
HLA-DQB1-201ENST00000374943 RGS2P41220 211 aa19.26■□□□□ 0.67
HLA-DQB1-201ENST00000374943 MYL6P60660 151 aa19.26■□□□□ 0.67
HLA-DQB1-201ENST00000374943 CDC42EP1Q00587 391 aa19.26■□□□□ 0.67
HLA-DQB1-201ENST00000374943 C8orf74Q6P047 294 aa19.26■□□□□ 0.67
HLA-DQB1-201ENST00000374943 TLK2Q86UE8 772 aa19.26■□□□□ 0.67
HLA-DQB1-201ENST00000374943 ZNF564Q8TBZ8 553 aaPredicted RBP19.26■□□□□ 0.67
HLA-DQB1-201ENST00000374943 NLRP7Q8WX94 980 aa19.26■□□□□ 0.67
HLA-DQB1-201ENST00000374943 APBA2Q99767 749 aa19.26■□□□□ 0.67
HLA-DQB1-201ENST00000374943 NUP85Q9BW27 656 aa19.26■□□□□ 0.67
HLA-DQB1-201ENST00000374943 Q9Y3F1 56 aa19.26■□□□□ 0.67
HLA-DQB1-201ENST00000374943 ALG6Q9Y672 507 aa19.26■□□□□ 0.67
HLA-DQB1-201ENST00000374943 SPDYE4A6NLX3 237 aa19.25■□□□□ 0.67
HLA-DQB1-201ENST00000374943 TSPAN1O60635 241 aa19.25■□□□□ 0.67
HLA-DQB1-201ENST00000374943 STAG3L1P0CL83 205 aa19.25■□□□□ 0.67
HLA-DQB1-201ENST00000374943 GNA15P30679 374 aa19.25■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms