RNA–Protein interactions for RNA: ENST00000369603.9

SMNDC1-202, Transcript of survival motor neuron domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMNDC1, Length 4,341 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-202ENST00000369603 PARD3BQ8TEW8 1205 aa5.64□□□□□ -1.51
SMNDC1-202ENST00000369603 MS4A14Q96JA4 679 aa5.64□□□□□ -1.51
SMNDC1-202ENST00000369603 SMC6Q96SB8 1091 aa5.64□□□□□ -1.51
SMNDC1-202ENST00000369603 ZNF518BQ9C0D4 1074 aa5.64□□□□□ -1.51
SMNDC1-202ENST00000369603 TMEM134Q9H6X4 195 aa5.64□□□□□ -1.51
SMNDC1-202ENST00000369603 PSD3Q9NYI0 1048 aa5.64□□□□□ -1.51
SMNDC1-202ENST00000369603 KIAA1257Q9ULG3 409 aa5.64□□□□□ -1.51
SMNDC1-202ENST00000369603 STAP1Q9ULZ2 295 aa5.64□□□□□ -1.51
SMNDC1-202ENST00000369603 SSX2IPQ9Y2D8 614 aa5.64□□□□□ -1.51
SMNDC1-202ENST00000369603 DUSP10Q9Y6W6 482 aa5.64□□□□□ -1.51
SMNDC1-202ENST00000369603 TIAM2Q8IVF5 1701 aa5.64□□□□□ -1.51
SMNDC1-202ENST00000369603 LTBP3Q9NS15 1303 aa5.64□□□□□ -1.51
SMNDC1-202ENST00000369603 IGLV3-22A0A075B6J6 115 aa5.64□□□□□ -1.51
SMNDC1-202ENST00000369603 ESYT3A0FGR9 886 aa5.64□□□□□ -1.51
SMNDC1-202ENST00000369603 PABPN1LA6NDY0 278 aaKnown RBP5.64□□□□□ -1.51
SMNDC1-202ENST00000369603 A8MXQ7 604 aa5.64□□□□□ -1.51
SMNDC1-202ENST00000369603 ZBTB39O15060 712 aa5.64□□□□□ -1.51
SMNDC1-202ENST00000369603 ADCY3O60266 1144 aa5.64□□□□□ -1.51
SMNDC1-202ENST00000369603 INHBAP08476 426 aa5.64□□□□□ -1.51
SMNDC1-202ENST00000369603 CYP2C9P11712 490 aa5.64□□□□□ -1.51
SMNDC1-202ENST00000369603 PMS2P54278 862 aa5.64□□□□□ -1.51
SMNDC1-202ENST00000369603 YWHAGP61981 247 aaKnown RBP eCLIP5.64□□□□□ -1.51
SMNDC1-202ENST00000369603 MRPS25P82663 173 aaKnown RBP5.64□□□□□ -1.51
SMNDC1-202ENST00000369603 IL9RQ01113 521 aa5.64□□□□□ -1.51
SMNDC1-202ENST00000369603 RNASELQ05823 741 aaKnown RBP5.64□□□□□ -1.51
SMNDC1-202ENST00000369603 SREBF2Q12772 1141 aa5.64□□□□□ -1.51
SMNDC1-202ENST00000369603 NR1H3Q13133 447 aa5.64□□□□□ -1.51
SMNDC1-202ENST00000369603 PRPSAP1Q14558 356 aa5.64□□□□□ -1.51
SMNDC1-202ENST00000369603 PSMD6Q15008 389 aa5.64□□□□□ -1.51
SMNDC1-202ENST00000369603 SLC35G1Q2M3R5 365 aa5.64□□□□□ -1.51
SMNDC1-202ENST00000369603 KIAA1755Q5JYT7 1200 aa5.64□□□□□ -1.51
SMNDC1-202ENST00000369603 FAM102AQ5T9C2 384 aaPredicted RBP5.64□□□□□ -1.51
SMNDC1-202ENST00000369603 MEI1Q5TIA1 1274 aa5.64□□□□□ -1.51
SMNDC1-202ENST00000369603 NOTUMQ6P988 496 aa5.64□□□□□ -1.51
SMNDC1-202ENST00000369603 FBXO16Q8IX29 292 aaPredicted RBP5.64□□□□□ -1.51
SMNDC1-202ENST00000369603 THEM5Q8N1Q8 247 aa5.64□□□□□ -1.51
SMNDC1-202ENST00000369603 GLIS3Q8NEA6 775 aa5.64□□□□□ -1.51
SMNDC1-202ENST00000369603 IL31RAQ8NI17 732 aa5.64□□□□□ -1.51
SMNDC1-202ENST00000369603 ACTRT1Q8TDG2 376 aa5.64□□□□□ -1.51
SMNDC1-202ENST00000369603 TAS1R2Q8TE23 839 aa5.64□□□□□ -1.51
SMNDC1-202ENST00000369603 FBF1Q8TES7 1133 aa5.64□□□□□ -1.51
SMNDC1-202ENST00000369603 CPA5Q8WXQ8 436 aa5.64□□□□□ -1.51
SMNDC1-202ENST00000369603 RNF25Q96BH1 459 aaPredicted RBP5.64□□□□□ -1.51
SMNDC1-202ENST00000369603 SNF8Q96H20 258 aa5.64□□□□□ -1.51
SMNDC1-202ENST00000369603 RSRC1Q96IZ7 334 aaKnown RBP5.64□□□□□ -1.51
SMNDC1-202ENST00000369603 C12orf42Q96LP6 360 aa5.64□□□□□ -1.51
SMNDC1-202ENST00000369603 GMLQ99445 158 aa5.64□□□□□ -1.51
SMNDC1-202ENST00000369603 HEMGNQ9BXL5 484 aa5.64□□□□□ -1.51
SMNDC1-202ENST00000369603 FOXP3Q9BZS1 431 aa5.64□□□□□ -1.51
SMNDC1-202ENST00000369603 THAP2Q9H0W7 228 aa5.64□□□□□ -1.51
SMNDC1-202ENST00000369603 PORCNQ9H237 461 aa5.64□□□□□ -1.51
SMNDC1-202ENST00000369603 DONSONQ9NYP3 566 aa5.64□□□□□ -1.51
SMNDC1-202ENST00000369603 TFR2Q9UP52 801 aa5.64□□□□□ -1.51
SMNDC1-202ENST00000369603 MYH14Q7Z406 1995 aaKnown RBP5.64□□□□□ -1.51
SMNDC1-202ENST00000369603 LOC102724159A0A0B4J2E5 919 aa5.63□□□□□ -1.51
SMNDC1-202ENST00000369603 TROVE2P10155 538 aaKnown RBP eCLIP5.63□□□□□ -1.51
SMNDC1-202ENST00000369603 PNPLA4P41247 253 aa5.63□□□□□ -1.51
SMNDC1-202ENST00000369603 ARL4CP56559 192 aa5.63□□□□□ -1.51
SMNDC1-202ENST00000369603 BASP1P80723 227 aaKnown RBP5.63□□□□□ -1.51
SMNDC1-202ENST00000369603 CNTN2Q02246 1040 aa5.63□□□□□ -1.51
SMNDC1-202ENST00000369603 PWP2Q15269 919 aaKnown RBP5.63□□□□□ -1.51
SMNDC1-202ENST00000369603 CYP4F22Q6NT55 531 aa5.63□□□□□ -1.51
SMNDC1-202ENST00000369603 C11orf63Q6NUN7 778 aa5.63□□□□□ -1.51
SMNDC1-202ENST00000369603 GSPT2Q8IYD1 628 aaKnown RBP5.63□□□□□ -1.51
SMNDC1-202ENST00000369603 TRPM4Q8TD43 1214 aa5.63□□□□□ -1.51
SMNDC1-202ENST00000369603 C7orf43Q8WVR3 580 aa5.63□□□□□ -1.51
SMNDC1-202ENST00000369603 PI4K2AQ9BTU6 479 aa5.63□□□□□ -1.51
SMNDC1-202ENST00000369603 TRIM62Q9BVG3 475 aa5.63□□□□□ -1.51
SMNDC1-202ENST00000369603 NT5C1AQ9BXI3 368 aa5.63□□□□□ -1.51
SMNDC1-202ENST00000369603 LRFN2Q9ULH4 789 aa5.63□□□□□ -1.51
SMNDC1-202ENST00000369603 NOVA2Q9UNW9 492 aaKnown RBP5.63□□□□□ -1.51
SMNDC1-202ENST00000369603 PIN4Q9Y237 131 aaKnown RBP5.63□□□□□ -1.51
SMNDC1-202ENST00000369603 LRP5O75197 1615 aa5.63□□□□□ -1.51
SMNDC1-202ENST00000369603 COL2A1P02458 1487 aaPredicted RBP5.63□□□□□ -1.51
SMNDC1-202ENST00000369603 EXOC1LA0A1B0GW35 172 aa5.63□□□□□ -1.51
SMNDC1-202ENST00000369603 LSM8O95777 96 aaKnown RBP5.63□□□□□ -1.51
SMNDC1-202ENST00000369603 SRGAP2BP0DMP2 458 aa5.63□□□□□ -1.51
SMNDC1-202ENST00000369603 ZFXP17010 805 aaPredicted RBP5.63□□□□□ -1.51
SMNDC1-202ENST00000369603 UBA1P22314 1058 aaKnown RBP5.63□□□□□ -1.51
SMNDC1-202ENST00000369603 RGS2P41220 211 aa5.63□□□□□ -1.51
SMNDC1-202ENST00000369603 ERVK-9P63128 1117 aa5.63□□□□□ -1.51
SMNDC1-202ENST00000369603 LAMTOR4Q0VGL1 99 aa5.63□□□□□ -1.51
SMNDC1-202ENST00000369603 SF3A3Q12874 501 aaKnown RBP eCLIP5.63□□□□□ -1.51
SMNDC1-202ENST00000369603 CFAP157Q5JU67 520 aa5.63□□□□□ -1.51
SMNDC1-202ENST00000369603 WDR59Q6PJI9 974 aa5.63□□□□□ -1.51
SMNDC1-202ENST00000369603 LRIG3Q6UXM1 1119 aa5.63□□□□□ -1.51
SMNDC1-202ENST00000369603 CNPY4Q8N129 248 aa5.63□□□□□ -1.51
SMNDC1-202ENST00000369603 FEZF2Q8TBJ5 459 aa5.63□□□□□ -1.51
SMNDC1-202ENST00000369603 BAP1Q92560 729 aa5.63□□□□□ -1.51
SMNDC1-202ENST00000369603 HSPH1Q92598 858 aa5.63□□□□□ -1.51
SMNDC1-202ENST00000369603 ZSWIM1Q9BR11 485 aa5.63□□□□□ -1.51
SMNDC1-202ENST00000369603 KLC2Q9H0B6 622 aa5.63□□□□□ -1.51
SMNDC1-202ENST00000369603 ISCUQ9H1K1 167 aa5.63□□□□□ -1.51
SMNDC1-202ENST00000369603 HSD3B7Q9H2F3 369 aa5.63□□□□□ -1.51
SMNDC1-202ENST00000369603 SLC38A7Q9NVC3 462 aa5.63□□□□□ -1.51
SMNDC1-202ENST00000369603 KLHL14Q9P2G3 628 aa5.63□□□□□ -1.51
SMNDC1-202ENST00000369603 SLC12A6Q9UHW9 1150 aa5.63□□□□□ -1.51
SMNDC1-202ENST00000369603 MYH6P13533 1939 aa5.63□□□□□ -1.51
SMNDC1-202ENST00000369603 IRS2Q9Y4H2 1338 aa5.63□□□□□ -1.51
SMNDC1-202ENST00000369603 SYNJ2BP-COX16A0A087WUM0 186 aa5.63□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms