RNA–Protein interactions for RNA: ENST00000366695.3

HIST3H2A-201, Transcript of histone cluster 3 H2A, humanhuman

APPRIS P1 BASIC

Gene HIST3H2A, Length 895 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIST3H2A-201ENST00000366695 LAG3P18627 525 aa16.63■□□□□ 0.25
HIST3H2A-201ENST00000366695 CDK11BP21127 795 aaKnown RBP16.63■□□□□ 0.25
HIST3H2A-201ENST00000366695 RABGGTBP53611 331 aa16.63■□□□□ 0.25
HIST3H2A-201ENST00000366695 SMAD3P84022 425 aaKnown RBP16.63■□□□□ 0.25
HIST3H2A-201ENST00000366695 SOX4Q06945 474 aaPredicted RBP16.63■□□□□ 0.25
HIST3H2A-201ENST00000366695 MAN2A1Q16706 1144 aa16.63■□□□□ 0.25
HIST3H2A-201ENST00000366695 HSP90AA4PQ58FG1 418 aa16.63■□□□□ 0.25
HIST3H2A-201ENST00000366695 LMBRD2Q68DH5 695 aaPredicted RBP16.63■□□□□ 0.25
HIST3H2A-201ENST00000366695 ZNF280BQ86YH2 543 aa16.63■□□□□ 0.25
HIST3H2A-201ENST00000366695 OR5B17Q8NGF7 314 aa16.63■□□□□ 0.25
HIST3H2A-201ENST00000366695 ZNF516Q92618 1163 aa16.63■□□□□ 0.25
HIST3H2A-201ENST00000366695 CLP1Q92989 425 aaKnown RBP16.63■□□□□ 0.25
HIST3H2A-201ENST00000366695 TUBGCP2Q9BSJ2 902 aa16.63■□□□□ 0.25
HIST3H2A-201ENST00000366695 TMEM8AQ9HCN3 771 aa16.63■□□□□ 0.25
HIST3H2A-201ENST00000366695 AAASQ9NRG9 546 aa16.63■□□□□ 0.25
HIST3H2A-201ENST00000366695 DPP3Q9NY33 737 aa16.63■□□□□ 0.25
HIST3H2A-201ENST00000366695 TUBGCP4Q9UGJ1 667 aa16.63■□□□□ 0.25
HIST3H2A-201ENST00000366695 MSRAQ9UJ68 235 aa16.63■□□□□ 0.25
HIST3H2A-201ENST00000366695 RWDD3Q9Y3V2 267 aa16.63■□□□□ 0.25
HIST3H2A-201ENST00000366695 MRPL42Q9Y6G3 142 aaKnown RBP16.63■□□□□ 0.25
HIST3H2A-201ENST00000366695 KIAA1671Q9BY89 1806 aa16.63■□□□□ 0.25
HIST3H2A-201ENST00000366695 PMM2O15305 246 aa16.62■□□□□ 0.25
HIST3H2A-201ENST00000366695 ZC3H11AO75152 810 aaKnown RBP eCLIP16.62■□□□□ 0.259e-6■■□□□ 13.5
HIST3H2A-201ENST00000366695 C4BPAP04003 597 aaKnown RBP16.62■□□□□ 0.25
HIST3H2A-201ENST00000366695 TPM2P07951 284 aa16.62■□□□□ 0.25
HIST3H2A-201ENST00000366695 PPP3CAQ08209 521 aa16.62■□□□□ 0.25
HIST3H2A-201ENST00000366695 ZACNQ401N2 412 aa16.62■□□□□ 0.25
HIST3H2A-201ENST00000366695 SPOUT1Q5T280 376 aaKnown RBP16.62■□□□□ 0.25
HIST3H2A-201ENST00000366695 KRT39Q6A163 491 aa16.62■□□□□ 0.25
HIST3H2A-201ENST00000366695 C15orf39Q6ZRI6 1047 aa16.62■□□□□ 0.25
HIST3H2A-201ENST00000366695 TRAPPC11Q7Z392 1133 aa16.62■□□□□ 0.25
HIST3H2A-201ENST00000366695 C1orf127Q8N9H9 656 aa16.62■□□□□ 0.25
HIST3H2A-201ENST00000366695 PBX4Q9BYU1 374 aa16.62■□□□□ 0.25
HIST3H2A-201ENST00000366695 LIMA1Q9UHB6 759 aaKnown RBP16.62■□□□□ 0.25
HIST3H2A-201ENST00000366695 NLRC5Q86WI3 1866 aa16.61■□□□□ 0.25
HIST3H2A-201ENST00000366695 ANO9A1A5B4 782 aa16.61■□□□□ 0.25
HIST3H2A-201ENST00000366695 LCHNA4D1U4 455 aa16.61■□□□□ 0.25
HIST3H2A-201ENST00000366695 CASTOR2A6NHX0 329 aa16.61■□□□□ 0.25
HIST3H2A-201ENST00000366695 LRRC10BA6NIK2 292 aa16.61■□□□□ 0.25
HIST3H2A-201ENST00000366695 P4HA2O15460 535 aa16.61■□□□□ 0.25
HIST3H2A-201ENST00000366695 B4GALT3O60512 393 aa16.61■□□□□ 0.25
HIST3H2A-201ENST00000366695 AFPP02771 609 aaKnown RBP16.61■□□□□ 0.25
HIST3H2A-201ENST00000366695 ALDH2P05091 517 aa16.61■□□□□ 0.25
HIST3H2A-201ENST00000366695 PAX3P23760 479 aa16.61■□□□□ 0.25
HIST3H2A-201ENST00000366695 GCLMP48507 274 aa16.61■□□□□ 0.25
HIST3H2A-201ENST00000366695 ALDH7A1P49419 539 aaKnown RBP16.61■□□□□ 0.25
HIST3H2A-201ENST00000366695 MXI1P50539 228 aa16.61■□□□□ 0.25
HIST3H2A-201ENST00000366695 BCAR1P56945 870 aa16.61■□□□□ 0.25
HIST3H2A-201ENST00000366695 RBP5P82980 135 aa16.61■□□□□ 0.25
HIST3H2A-201ENST00000366695 KCNH2Q12809 1159 aa16.61■□□□□ 0.25
HIST3H2A-201ENST00000366695 BIRC3Q13489 604 aa16.61■□□□□ 0.25
HIST3H2A-201ENST00000366695 KRT31Q15323 416 aa16.61■□□□□ 0.25
HIST3H2A-201ENST00000366695 UPP1Q16831 310 aa16.61■□□□□ 0.25
HIST3H2A-201ENST00000366695 LRIT3Q3SXY7 679 aa16.61■□□□□ 0.25
HIST3H2A-201ENST00000366695 TDRD10Q5VZ19 366 aaKnown RBP16.61■□□□□ 0.25
HIST3H2A-201ENST00000366695 SV2AQ7L0J3 742 aa16.61■□□□□ 0.25
HIST3H2A-201ENST00000366695 ZNF558Q96NG5 402 aa16.61■□□□□ 0.25
HIST3H2A-201ENST00000366695 GOLGA2P5Q9HBQ8 144 aa16.61■□□□□ 0.25
HIST3H2A-201ENST00000366695 HCSTQ9UBK5 93 aa16.61■□□□□ 0.25
HIST3H2A-201ENST00000366695 DNAJB4Q9UDY4 337 aa16.61■□□□□ 0.25
HIST3H2A-201ENST00000366695 COLQQ9Y215 455 aaPredicted RBP16.61■□□□□ 0.25
HIST3H2A-201ENST00000366695 FAN1Q9Y2M0 1017 aa16.61■□□□□ 0.25
HIST3H2A-201ENST00000366695 R3HCC1Q9Y3T6 440 aaKnown RBP16.61■□□□□ 0.25
HIST3H2A-201ENST00000366695 LINC01553A4QN01 128 aa16.6■□□□□ 0.25
HIST3H2A-201ENST00000366695 TMEM189-UBE2V1I3L0A0 370 aa16.6■□□□□ 0.25
HIST3H2A-201ENST00000366695 PODXLO00592 558 aa16.6■□□□□ 0.25
HIST3H2A-201ENST00000366695 PIRO00625 290 aa16.6■□□□□ 0.25
HIST3H2A-201ENST00000366695 PHACTR2O75167 634 aa16.6■□□□□ 0.25
HIST3H2A-201ENST00000366695 ITGB3P05106 788 aa16.6■□□□□ 0.25
HIST3H2A-201ENST00000366695 CA3P07451 260 aa16.6■□□□□ 0.25
HIST3H2A-201ENST00000366695 GALTP07902 379 aa16.6■□□□□ 0.25
HIST3H2A-201ENST00000366695 LINC00271P0C7V0 271 aa16.6■□□□□ 0.25
HIST3H2A-201ENST00000366695 ATP1A3P13637 1013 aa16.6■□□□□ 0.25
HIST3H2A-201ENST00000366695 MYOGP15173 224 aa16.6■□□□□ 0.25
HIST3H2A-201ENST00000366695 OR1G1P47890 313 aa16.6■□□□□ 0.25
HIST3H2A-201ENST00000366695 FMO5P49326 533 aa16.6■□□□□ 0.25
HIST3H2A-201ENST00000366695 CLCNKBP51801 687 aa16.6■□□□□ 0.25
HIST3H2A-201ENST00000366695 GUCY2FP51841 1108 aa16.6■□□□□ 0.25
HIST3H2A-201ENST00000366695 CETN1Q12798 172 aa16.6■□□□□ 0.25
HIST3H2A-201ENST00000366695 VWA3BQ502W6 1294 aa16.6■□□□□ 0.25
HIST3H2A-201ENST00000366695 C9orf57Q5W0N0 161 aa16.6■□□□□ 0.25
HIST3H2A-201ENST00000366695 DCLRE1AQ6PJP8 1040 aa16.6■□□□□ 0.25
HIST3H2A-201ENST00000366695 KCNT2Q6UVM3 1135 aa16.6■□□□□ 0.25
HIST3H2A-201ENST00000366695 GAS2L3Q86XJ1 694 aa16.6■□□□□ 0.25
HIST3H2A-201ENST00000366695 LRRC52Q8N7C0 313 aa16.6■□□□□ 0.25
HIST3H2A-201ENST00000366695 COLGALT1Q8NBJ5 622 aa16.6■□□□□ 0.25
HIST3H2A-201ENST00000366695 RNF214Q8ND24 703 aa16.6■□□□□ 0.25
HIST3H2A-201ENST00000366695 CXorf38Q8TB03 319 aa16.6■□□□□ 0.25
HIST3H2A-201ENST00000366695 ZNF560Q96MR9 790 aa16.6■□□□□ 0.25
HIST3H2A-201ENST00000366695 SAMD11Q96NU1 681 aa16.6■□□□□ 0.25
HIST3H2A-201ENST00000366695 COLEC11Q9BWP8 271 aa16.6■□□□□ 0.25
HIST3H2A-201ENST00000366695 MMRN2Q9H8L6 949 aa16.6■□□□□ 0.25
HIST3H2A-201ENST00000366695 SIX4Q9UIU6 781 aa16.6■□□□□ 0.25
HIST3H2A-201ENST00000366695 YBX2Q9Y2T7 364 aaKnown RBP16.6■□□□□ 0.25
HIST3H2A-201ENST00000366695 PCDHB12Q9Y5F1 795 aa16.6■□□□□ 0.25
HIST3H2A-201ENST00000366695 NRP1O14786 923 aa16.59■□□□□ 0.25
HIST3H2A-201ENST00000366695 KRT19P08727 400 aa16.59■□□□□ 0.25
HIST3H2A-201ENST00000366695 POLR2BP30876 1174 aaKnown RBP16.59■□□□□ 0.25
HIST3H2A-201ENST00000366695 PPM1AP35813 382 aa16.59■□□□□ 0.25
HIST3H2A-201ENST00000366695 PBX2P40425 430 aa16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms