RNA–Protein interactions for RNA: ENST00000332814.6

C11orf88-201, Transcript of chromosome 11 open reading frame 88, humanhuman

APPRIS P4 TSL 5 BASIC

Gene C11orf88, Length 795 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88-201ENST00000332814 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP17.78■□□□□ 0.44
C11orf88-201ENST00000332814 AGPAT3Q9NRZ7 376 aa17.78■□□□□ 0.44
C11orf88-201ENST00000332814 HSPBP1Q9NZL4 362 aa17.78■□□□□ 0.44
C11orf88-201ENST00000332814 C2CD2Q9Y426 696 aa17.78■□□□□ 0.44
C11orf88-201ENST00000332814 LINC01565O15544 149 aa17.77■□□□□ 0.44
C11orf88-201ENST00000332814 MEFVO15553 781 aaPredicted RBP17.77■□□□□ 0.44
C11orf88-201ENST00000332814 GADD45BO75293 160 aaPredicted RBP17.77■□□□□ 0.44
C11orf88-201ENST00000332814 ADH1AP07327 375 aa17.77■□□□□ 0.44
C11orf88-201ENST00000332814 NFICP08651 508 aa17.77■□□□□ 0.44
C11orf88-201ENST00000332814 KLRC2P26717 231 aa17.77■□□□□ 0.44
C11orf88-201ENST00000332814 UBE2HP62256 183 aa17.77■□□□□ 0.44
C11orf88-201ENST00000332814 DSG1Q02413 1049 aa17.77■□□□□ 0.44
C11orf88-201ENST00000332814 ADAM15Q13444 863 aa17.77■□□□□ 0.44
C11orf88-201ENST00000332814 PDXDC1Q6P996 788 aa17.77■□□□□ 0.44
C11orf88-201ENST00000332814 ELMSAN1Q6PJG2 1045 aa17.77■□□□□ 0.44
C11orf88-201ENST00000332814 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.77■□□□□ 0.44
C11orf88-201ENST00000332814 TAS1R1Q7RTX1 841 aa17.77■□□□□ 0.44
C11orf88-201ENST00000332814 BRSK2Q8IWQ3 736 aa17.77■□□□□ 0.44
C11orf88-201ENST00000332814 RNF168Q8IYW5 571 aaPredicted RBP17.77■□□□□ 0.44
C11orf88-201ENST00000332814 CASP10Q92851 521 aa17.77■□□□□ 0.44
C11orf88-201ENST00000332814 SMARCE1Q969G3 411 aa17.77■□□□□ 0.44
C11orf88-201ENST00000332814 B3GALT6Q96L58 329 aa17.77■□□□□ 0.44
C11orf88-201ENST00000332814 GBP4Q96PP9 640 aa17.77■□□□□ 0.44
C11orf88-201ENST00000332814 TTPALQ9BTX7 342 aa17.77■□□□□ 0.44
C11orf88-201ENST00000332814 FAM50BQ9Y247 325 aa17.77■□□□□ 0.44
C11orf88-201ENST00000332814 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP17.76■□□□□ 0.43
C11orf88-201ENST00000332814 ZNF233A6NK53 670 aa17.76■□□□□ 0.43
C11orf88-201ENST00000332814 H3BQ06 376 aaPredicted RBP17.76■□□□□ 0.43
C11orf88-201ENST00000332814 CLIC2O15247 247 aa17.76■□□□□ 0.43
C11orf88-201ENST00000332814 TGFB1I1O43294 461 aa17.76■□□□□ 0.43
C11orf88-201ENST00000332814 CLASP2O75122 1294 aaKnown RBP17.76■□□□□ 0.43
C11orf88-201ENST00000332814 ADRB2P07550 413 aa17.76■□□□□ 0.43
C11orf88-201ENST00000332814 HOXD13P35453 343 aa17.76■□□□□ 0.43
C11orf88-201ENST00000332814 CYP2J2P51589 502 aa17.76■□□□□ 0.43
C11orf88-201ENST00000332814 COL19A1Q14993 1142 aa17.76■□□□□ 0.43
C11orf88-201ENST00000332814 SURF1Q15526 300 aa17.76■□□□□ 0.43
C11orf88-201ENST00000332814 CTC1Q2NKJ3 1217 aa17.76■□□□□ 0.43
C11orf88-201ENST00000332814 LEXMQ3ZCV2 418 aa17.76■□□□□ 0.43
C11orf88-201ENST00000332814 TJAP1Q5JTD0 557 aa17.76■□□□□ 0.43
C11orf88-201ENST00000332814 CRELD2Q6UXH1 353 aaPredicted RBP17.76■□□□□ 0.43
C11orf88-201ENST00000332814 NT5DC4Q86YG4 428 aa17.76■□□□□ 0.43
C11orf88-201ENST00000332814 XXYLT1Q8NBI6 393 aa17.76■□□□□ 0.43
C11orf88-201ENST00000332814 CACTINQ8WUQ7 758 aaKnown RBP17.76■□□□□ 0.43
C11orf88-201ENST00000332814 ASB2Q96Q27 587 aa17.76■□□□□ 0.43
C11orf88-201ENST00000332814 CHST7Q9NS84 486 aa17.76■□□□□ 0.43
C11orf88-201ENST00000332814 BARX2Q9UMQ3 279 aaPredicted RBP17.76■□□□□ 0.43
C11orf88-201ENST00000332814 R3HCC1Q9Y3T6 440 aaKnown RBP17.76■□□□□ 0.43
C11orf88-201ENST00000332814 CALUO43852 315 aaPredicted RBP17.75■□□□□ 0.43
C11orf88-201ENST00000332814 EXOC3O60645 756 aa17.75■□□□□ 0.43
C11orf88-201ENST00000332814 TBX10O75333 385 aa17.75■□□□□ 0.43
C11orf88-201ENST00000332814 PRPF40AO75400 957 aaKnown RBP17.75■□□□□ 0.43
C11orf88-201ENST00000332814 EFEMP2O95967 443 aa17.75■□□□□ 0.43
C11orf88-201ENST00000332814 CNPP09543 421 aaKnown RBP17.75■□□□□ 0.43
C11orf88-201ENST00000332814 LRPAP1P30533 357 aa17.75■□□□□ 0.43
C11orf88-201ENST00000332814 BRCC3P46736 316 aa17.75■□□□□ 0.43
C11orf88-201ENST00000332814 TFAMQ00059 246 aaKnown RBP17.75■□□□□ 0.43
C11orf88-201ENST00000332814 PSMD5Q16401 504 aa17.75■□□□□ 0.43
C11orf88-201ENST00000332814 PUS10Q3MIT2 529 aaKnown RBP17.75■□□□□ 0.43
C11orf88-201ENST00000332814 KIAA0319Q5VV43 1072 aa17.75■□□□□ 0.43
C11orf88-201ENST00000332814 SPATA1Q5VX52 437 aa17.75■□□□□ 0.43
C11orf88-201ENST00000332814 GPR65Q8IYL9 337 aa17.75■□□□□ 0.43
C11orf88-201ENST00000332814 C3orf58Q8NDZ4 430 aa17.75■□□□□ 0.43
C11orf88-201ENST00000332814 KLHL5Q96PQ7 755 aa17.75■□□□□ 0.43
C11orf88-201ENST00000332814 GSDMAQ96QA5 445 aa17.75■□□□□ 0.43
C11orf88-201ENST00000332814 GTPBP4Q9BZE4 634 aaKnown RBP17.75■□□□□ 0.43
C11orf88-201ENST00000332814 CD207Q9UJ71 328 aa17.75■□□□□ 0.43
C11orf88-201ENST00000332814 HCFC2Q9Y5Z7 792 aa17.75■□□□□ 0.43
C11orf88-201ENST00000332814 CDH23Q9H251 3354 aa17.75■□□□□ 0.43
C11orf88-201ENST00000332814 ATG2AQ2TAZ0 1938 aa17.74■□□□□ 0.43
C11orf88-201ENST00000332814 CITO14578 2027 aa17.74■□□□□ 0.43
C11orf88-201ENST00000332814 I3L4J1 428 aa17.74■□□□□ 0.43
C11orf88-201ENST00000332814 TMEM191BP0C7N4 346 aa17.74■□□□□ 0.43
C11orf88-201ENST00000332814 CLUL1Q15846 466 aa17.74■□□□□ 0.43
C11orf88-201ENST00000332814 ZBTB6Q15916 424 aa17.74■□□□□ 0.43
C11orf88-201ENST00000332814 SNRNP35Q16560 246 aaKnown RBP17.74■□□□□ 0.43
C11orf88-201ENST00000332814 RTP2Q5QGT7 225 aa17.74■□□□□ 0.43
C11orf88-201ENST00000332814 PRSS55Q6UWB4 352 aaPredicted RBP17.74■□□□□ 0.43
C11orf88-201ENST00000332814 DSTYKQ6XUX3 929 aa17.74■□□□□ 0.43
C11orf88-201ENST00000332814 CBWD2Q8IUF1 395 aa17.74■□□□□ 0.43
C11orf88-201ENST00000332814 C12orf56Q8IXR9 622 aa17.74■□□□□ 0.43
C11orf88-201ENST00000332814 RDH13Q8NBN7 331 aa17.74■□□□□ 0.43
C11orf88-201ENST00000332814 ZSWIM2Q8NEG5 633 aa17.74■□□□□ 0.43
C11orf88-201ENST00000332814 DPP3Q9NY33 737 aa17.74■□□□□ 0.43
C11orf88-201ENST00000332814 DPP7Q9UHL4 492 aa17.74■□□□□ 0.43
C11orf88-201ENST00000332814 MAPK8IP1Q9UQF2 711 aa17.74■□□□□ 0.43
C11orf88-201ENST00000332814 ARHGEF37A1IGU5 675 aa17.73■□□□□ 0.43
C11orf88-201ENST00000332814 GOLGA6L22H0YM25 854 aa17.73■□□□□ 0.43
C11orf88-201ENST00000332814 PDXKO00764 312 aa17.73■□□□□ 0.43
C11orf88-201ENST00000332814 SYN3O14994 580 aa17.73■□□□□ 0.43
C11orf88-201ENST00000332814 TEX28O15482 410 aa17.73■□□□□ 0.43
C11orf88-201ENST00000332814 GLP2RO95838 553 aa17.73■□□□□ 0.43
C11orf88-201ENST00000332814 GLUD1P00367 558 aa17.73■□□□□ 0.43
C11orf88-201ENST00000332814 PAX3P23760 479 aa17.73■□□□□ 0.43
C11orf88-201ENST00000332814 KCNQ1P51787 676 aa17.73■□□□□ 0.43
C11orf88-201ENST00000332814 GUCY2FP51841 1108 aa17.73■□□□□ 0.43
C11orf88-201ENST00000332814 PTCRAQ6ISU1 281 aaPredicted RBP17.73■□□□□ 0.43
C11orf88-201ENST00000332814 ANKS3Q6ZW76 656 aa17.73■□□□□ 0.43
C11orf88-201ENST00000332814 GLYCTKQ8IVS8 523 aa17.73■□□□□ 0.43
C11orf88-201ENST00000332814 ELOA2Q8IYF1 753 aaPredicted RBP17.73■□□□□ 0.43
C11orf88-201ENST00000332814 GUF1Q8N442 669 aaKnown RBP17.73■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms