RNA–Protein interactions for RNA: ENST00000332556.4

LAMP1-201, Transcript of lysosomal associated membrane protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LAMP1, Length 2,699 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMP1-201ENST00000332556 ATP6V0A4Q9HBG4 840 aa20.32■□□□□ 0.84
LAMP1-201ENST00000332556 CCT8L1PA6NM43 557 aa20.32■□□□□ 0.84
LAMP1-201ENST00000332556 GPC3P51654 580 aa20.32■□□□□ 0.84
LAMP1-201ENST00000332556 HIRAP54198 1017 aaPredicted RBP20.32■□□□□ 0.84
LAMP1-201ENST00000332556 XRCC4Q13426 336 aa20.32■□□□□ 0.84
LAMP1-201ENST00000332556 TMEM63BQ5T3F8 832 aa20.32■□□□□ 0.84
LAMP1-201ENST00000332556 SEL1L2Q5TEA6 688 aa20.32■□□□□ 0.84
LAMP1-201ENST00000332556 DENND2CQ68D51 928 aa20.32■□□□□ 0.84
LAMP1-201ENST00000332556 OR5B17Q8NGF7 314 aa20.32■□□□□ 0.84
LAMP1-201ENST00000332556 EPS8L3Q8TE67 593 aaKnown RBP20.32■□□□□ 0.84
LAMP1-201ENST00000332556 MFSD14AQ96MC6 490 aa20.32■□□□□ 0.84
LAMP1-201ENST00000332556 C11orf70Q9BRQ4 267 aa20.32■□□□□ 0.84
LAMP1-201ENST00000332556 APOBEC3GQ9HC16 384 aaKnown RBP20.32■□□□□ 0.84
LAMP1-201ENST00000332556 FBXO40Q9UH90 709 aa20.32■□□□□ 0.84
LAMP1-201ENST00000332556 HLA-DRAP01903 254 aa20.31■□□□□ 0.84
LAMP1-201ENST00000332556 GJB1P08034 283 aa20.31■□□□□ 0.84
LAMP1-201ENST00000332556 TNFSF9P41273 254 aa20.31■□□□□ 0.84
LAMP1-201ENST00000332556 ELF3P78545 371 aaPredicted RBP20.31■□□□□ 0.84
LAMP1-201ENST00000332556 ATXN2LQ8WWM7 1075 aaKnown RBP20.31■□□□□ 0.84
LAMP1-201ENST00000332556 KIFAP3Q92845 792 aa20.31■□□□□ 0.84
LAMP1-201ENST00000332556 GPRASP2Q96D09 838 aa20.31■□□□□ 0.84
LAMP1-201ENST00000332556 FNBP1Q96RU3 617 aa20.31■□□□□ 0.84
LAMP1-201ENST00000332556 CNOT10Q9H9A5 744 aaKnown RBP20.31■□□□□ 0.84
LAMP1-201ENST00000332556 CHST7Q9NS84 486 aa20.31■□□□□ 0.84
LAMP1-201ENST00000332556 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP20.31■□□□□ 0.844e-10■■■■■ 30.6
LAMP1-201ENST00000332556 GRHL1Q9NZI5 618 aa20.31■□□□□ 0.84
LAMP1-201ENST00000332556 P4HA2O15460 535 aa20.31■□□□□ 0.84
LAMP1-201ENST00000332556 VIMP08670 466 aaKnown RBP20.31■□□□□ 0.84
LAMP1-201ENST00000332556 PIK3CAP42336 1068 aa20.31■□□□□ 0.84
LAMP1-201ENST00000332556 TMEM270Q6UE05 265 aa20.31■□□□□ 0.84
LAMP1-201ENST00000332556 HOOK3Q86VS8 718 aa20.31■□□□□ 0.84
LAMP1-201ENST00000332556 IFT74Q96LB3 600 aa20.31■□□□□ 0.84
LAMP1-201ENST00000332556 ACAD9Q9H845 621 aa20.31■□□□□ 0.84
LAMP1-201ENST00000332556 CD2APQ9Y5K6 639 aa20.31■□□□□ 0.84
LAMP1-201ENST00000332556 RGS16O15492 202 aaPredicted RBP20.3■□□□□ 0.84
LAMP1-201ENST00000332556 PHF2O75151 1096 aa20.3■□□□□ 0.84
LAMP1-201ENST00000332556 CLTAP09496 248 aa20.3■□□□□ 0.84
LAMP1-201ENST00000332556 RFX1P22670 979 aa20.3■□□□□ 0.84
LAMP1-201ENST00000332556 OSTNP61366 133 aa20.3■□□□□ 0.84
LAMP1-201ENST00000332556 ACCSLQ4AC99 568 aa20.3■□□□□ 0.84
LAMP1-201ENST00000332556 PNMA8AQ86V59 439 aaPredicted RBP20.3■□□□□ 0.84
LAMP1-201ENST00000332556 NLGN2Q8NFZ4 835 aa20.3■□□□□ 0.84
LAMP1-201ENST00000332556 CD101Q93033 1021 aa20.3■□□□□ 0.84
LAMP1-201ENST00000332556 ACSF2Q96CM8 615 aaPredicted RBP20.3■□□□□ 0.84
LAMP1-201ENST00000332556 IWS1Q96ST2 819 aa20.3■□□□□ 0.84
LAMP1-201ENST00000332556 TEX13BQ9BXU2 312 aa20.3■□□□□ 0.84
LAMP1-201ENST00000332556 PABPC3Q9H361 631 aaKnown RBP20.3■□□□□ 0.84
LAMP1-201ENST00000332556 KDM4CQ9H3R0 1056 aa20.3■□□□□ 0.84
LAMP1-201ENST00000332556 DGAT1O75907 488 aa20.3■□□□□ 0.84
LAMP1-201ENST00000332556 VNN1O95497 513 aa20.3■□□□□ 0.84
LAMP1-201ENST00000332556 GLRA2P23416 452 aa20.3■□□□□ 0.84
LAMP1-201ENST00000332556 MAPK4P31152 587 aa20.3■□□□□ 0.84
LAMP1-201ENST00000332556 EIF3BP55884 814 aaKnown RBP20.3■□□□□ 0.84
LAMP1-201ENST00000332556 C11orf63Q6NUN7 778 aa20.3■□□□□ 0.84
LAMP1-201ENST00000332556 CRELD2Q6UXH1 353 aaPredicted RBP20.3■□□□□ 0.84
LAMP1-201ENST00000332556 ARMC9Q7Z3E5 817 aa20.3■□□□□ 0.84
LAMP1-201ENST00000332556 TBC1D1Q86TI0 1168 aaPredicted RBP20.3■□□□□ 0.84
LAMP1-201ENST00000332556 PPP1R16BQ96T49 567 aa20.3■□□□□ 0.84
LAMP1-201ENST00000332556 PDLIM7Q9NR12 457 aa20.3■□□□□ 0.84
LAMP1-201ENST00000332556 CEP350Q5VT06 3117 aa20.3■□□□□ 0.84
LAMP1-201ENST00000332556 MROH7Q68CQ1 1323 aa20.3■□□□□ 0.84
LAMP1-201ENST00000332556 ACAD10Q6JQN1 1059 aa20.3■□□□□ 0.84
LAMP1-201ENST00000332556 CATSPERGQ6ZRH7 1159 aa20.3■□□□□ 0.84
LAMP1-201ENST00000332556 MOB2Q70IA6 237 aa20.3■□□□□ 0.84
LAMP1-201ENST00000332556 SLC13A5Q86YT5 568 aaPredicted RBP20.3■□□□□ 0.84
LAMP1-201ENST00000332556 C1orf112Q9NSG2 853 aa20.3■□□□□ 0.84
LAMP1-201ENST00000332556 INTS9Q9NV88 658 aaKnown RBP20.3■□□□□ 0.84
LAMP1-201ENST00000332556 AGO2Q9UKV8 859 aaKnown RBP20.3■□□□□ 0.84
LAMP1-201ENST00000332556 TTC7AQ9ULT0 858 aaPredicted RBP20.3■□□□□ 0.84
LAMP1-201ENST00000332556 LOXHD1Q8IVV2 1947 aa20.29■□□□□ 0.84
LAMP1-201ENST00000332556 TCF4P15884 667 aa20.29■□□□□ 0.84
LAMP1-201ENST00000332556 CD58P19256 250 aa20.29■□□□□ 0.84
LAMP1-201ENST00000332556 LRRC14Q15048 493 aa20.29■□□□□ 0.84
LAMP1-201ENST00000332556 LY6KQ17RY6 165 aa20.29■□□□□ 0.84
LAMP1-201ENST00000332556 ATP13A4Q4VNC1 1196 aa20.29■□□□□ 0.84
LAMP1-201ENST00000332556 DCAF15Q66K64 600 aa20.29■□□□□ 0.84
LAMP1-201ENST00000332556 ANKS1BQ7Z6G8 1248 aa20.29■□□□□ 0.84
LAMP1-201ENST00000332556 SAMD3Q8N6K7 520 aa20.29■□□□□ 0.84
LAMP1-201ENST00000332556 MGARPQ8TDB4 240 aa20.29■□□□□ 0.84
LAMP1-201ENST00000332556 KLRG1Q96E93 195 aa20.29■□□□□ 0.84
LAMP1-201ENST00000332556 ZNF302Q9NR11 478 aa20.29■□□□□ 0.84
LAMP1-201ENST00000332556 R3HDM2Q9Y2K5 976 aaKnown RBP20.29■□□□□ 0.84
LAMP1-201ENST00000332556 COQ4Q9Y3A0 265 aa20.29■□□□□ 0.84
LAMP1-201ENST00000332556 POLR2AP24928 1970 aaKnown RBP20.29■□□□□ 0.84
LAMP1-201ENST00000332556 MYH9P35579 1960 aaKnown RBP20.29■□□□□ 0.84
LAMP1-201ENST00000332556 SYNGAP1Q96PV0 1343 aa20.29■□□□□ 0.84
LAMP1-201ENST00000332556 ATP6V1G2O95670 118 aa20.29■□□□□ 0.84
LAMP1-201ENST00000332556 CYP1A2P05177 515 aa20.29■□□□□ 0.84
LAMP1-201ENST00000332556 PGK2P07205 417 aa20.29■□□□□ 0.84
LAMP1-201ENST00000332556 SUPT20HL2P0C7V6 817 aa20.29■□□□□ 0.84
LAMP1-201ENST00000332556 EZRP15311 586 aaKnown RBP20.29■□□□□ 0.84
LAMP1-201ENST00000332556 PSMC4P43686 418 aa20.29■□□□□ 0.84
LAMP1-201ENST00000332556 MMP13P45452 471 aa20.29■□□□□ 0.84
LAMP1-201ENST00000332556 SIX1Q15475 284 aaPredicted RBP20.29■□□□□ 0.84
LAMP1-201ENST00000332556 CLEC16AQ2KHT3 1053 aa20.29■□□□□ 0.84
LAMP1-201ENST00000332556 SUPT20HL1Q3ZLR7 823 aa20.29■□□□□ 0.84
LAMP1-201ENST00000332556 LRRC71Q8N4P6 559 aa20.29■□□□□ 0.84
LAMP1-201ENST00000332556 FBXL18Q96ME1 805 aa20.29■□□□□ 0.84
LAMP1-201ENST00000332556 NTPCRQ9BSD7 190 aaKnown RBP20.29■□□□□ 0.84
LAMP1-201ENST00000332556 DDX23Q9BUQ8 820 aaKnown RBP20.29■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms