RNA–Protein interactions for RNA: ENST00000328863.8

CLRN1-203, Transcript of clarin 1, humanhuman

TSL 1 (best) BASIC

Gene CLRN1, Length 738 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1-203ENST00000328863 HCFC2Q9Y5Z7 792 aa16.11■□□□□ 0.17
CLRN1-203ENST00000328863 LACTBL1A8MY62 500 aa16.1■□□□□ 0.17
CLRN1-203ENST00000328863 MEFVO15553 781 aaPredicted RBP16.1■□□□□ 0.17
CLRN1-203ENST00000328863 EXTL3O43909 919 aa16.1■□□□□ 0.17
CLRN1-203ENST00000328863 RPN1P04843 607 aaKnown RBP16.1■□□□□ 0.17
CLRN1-203ENST00000328863 PRR29P0C7W0 189 aa16.1■□□□□ 0.17
CLRN1-203ENST00000328863 MCM4P33991 863 aa16.1■□□□□ 0.17
CLRN1-203ENST00000328863 ADAM15Q13444 863 aa16.1■□□□□ 0.17
CLRN1-203ENST00000328863 FAM171A1Q5VUB5 890 aa16.1■□□□□ 0.17
CLRN1-203ENST00000328863 LLGL2Q6P1M3 1020 aa16.1■□□□□ 0.17
CLRN1-203ENST00000328863 NT5DC4Q86YG4 428 aa16.1■□□□□ 0.17
CLRN1-203ENST00000328863 NELFCDQ8IXH7 590 aa16.1■□□□□ 0.17
CLRN1-203ENST00000328863 FMR1NBQ8N0W7 255 aaPredicted RBP16.1■□□□□ 0.17
CLRN1-203ENST00000328863 GPD1LQ8N335 351 aa16.1■□□□□ 0.17
CLRN1-203ENST00000328863 ZNF507Q8TCN5 953 aa16.1■□□□□ 0.17
CLRN1-203ENST00000328863 NOC3LQ8WTT2 800 aaKnown RBP16.1■□□□□ 0.17
CLRN1-203ENST00000328863 C18orf25Q96B23 403 aaPredicted RBP16.1■□□□□ 0.17
CLRN1-203ENST00000328863 SAAL1Q96ER3 474 aa16.1■□□□□ 0.17
CLRN1-203ENST00000328863 GPR62Q9BZJ7 368 aa16.1■□□□□ 0.17
CLRN1-203ENST00000328863 IKZF4Q9H2S9 585 aa16.1■□□□□ 0.17
CLRN1-203ENST00000328863 DZANK1Q9NVP4 752 aa16.1■□□□□ 0.17
CLRN1-203ENST00000328863 CGNQ9P2M7 1197 aaKnown RBP16.1■□□□□ 0.17
CLRN1-203ENST00000328863 CD207Q9UJ71 328 aa16.1■□□□□ 0.17
CLRN1-203ENST00000328863 BARX2Q9UMQ3 279 aaPredicted RBP16.1■□□□□ 0.17
CLRN1-203ENST00000328863 SPDYE4A6NLX3 237 aa16.09■□□□□ 0.17
CLRN1-203ENST00000328863 KINO60870 393 aaKnown RBP16.09■□□□□ 0.17
CLRN1-203ENST00000328863 CLASP2O75122 1294 aaKnown RBP16.09■□□□□ 0.17
CLRN1-203ENST00000328863 ADRB2P07550 413 aa16.09■□□□□ 0.17
CLRN1-203ENST00000328863 NFICP08651 508 aa16.09■□□□□ 0.17
CLRN1-203ENST00000328863 LRPAP1P30533 357 aa16.09■□□□□ 0.17
CLRN1-203ENST00000328863 KCNQ1P51787 676 aa16.09■□□□□ 0.17
CLRN1-203ENST00000328863 SPAG1Q07617 926 aa16.09■□□□□ 0.17
CLRN1-203ENST00000328863 DPYDQ12882 1025 aa16.09■□□□□ 0.17
CLRN1-203ENST00000328863 SMAD4Q13485 552 aaKnown RBP16.09■□□□□ 0.17
CLRN1-203ENST00000328863 JADE1Q6IE81 842 aa16.09■□□□□ 0.17
CLRN1-203ENST00000328863 KIAA0895Q8NCT3 520 aa16.09■□□□□ 0.17
CLRN1-203ENST00000328863 C3orf58Q8NDZ4 430 aa16.09■□□□□ 0.17
CLRN1-203ENST00000328863 RIN2Q8WYP3 895 aaPredicted RBP16.09■□□□□ 0.17
CLRN1-203ENST00000328863 PIK3R5Q8WYR1 880 aa16.09■□□□□ 0.17
CLRN1-203ENST00000328863 TTPALQ9BTX7 342 aa16.09■□□□□ 0.17
CLRN1-203ENST00000328863 KIAA1586Q9HCI6 787 aa16.09■□□□□ 0.17
CLRN1-203ENST00000328863 AGPAT3Q9NRZ7 376 aa16.09■□□□□ 0.17
CLRN1-203ENST00000328863 CHST7Q9NS84 486 aa16.09■□□□□ 0.17
CLRN1-203ENST00000328863 RMND1Q9NWS8 449 aa16.09■□□□□ 0.17
CLRN1-203ENST00000328863 TCF20Q9UGU0 1960 aaKnown RBP16.08■□□□□ 0.16
CLRN1-203ENST00000328863 RHOBTB3O94955 611 aa16.08■□□□□ 0.16
CLRN1-203ENST00000328863 GLUD1P00367 558 aa16.08■□□□□ 0.16
CLRN1-203ENST00000328863 CNPP09543 421 aaKnown RBP16.08■□□□□ 0.16
CLRN1-203ENST00000328863 KLRC2P26717 231 aa16.08■□□□□ 0.16
CLRN1-203ENST00000328863 LTBRP36941 435 aa16.08■□□□□ 0.16
CLRN1-203ENST00000328863 DLX2Q07687 328 aaPredicted RBP16.08■□□□□ 0.16
CLRN1-203ENST00000328863 KCNB1Q14721 858 aa16.08■□□□□ 0.16
CLRN1-203ENST00000328863 PSMD5Q16401 504 aa16.08■□□□□ 0.16
CLRN1-203ENST00000328863 KNOP1Q1ED39 458 aaKnown RBP16.08■□□□□ 0.16
CLRN1-203ENST00000328863 RTP2Q5QGT7 225 aa16.08■□□□□ 0.16
CLRN1-203ENST00000328863 SPATA1Q5VX52 437 aa16.08■□□□□ 0.16
CLRN1-203ENST00000328863 PTCRAQ6ISU1 281 aaPredicted RBP16.08■□□□□ 0.16
CLRN1-203ENST00000328863 TMEM184AQ6ZMB5 413 aa16.08■□□□□ 0.16
CLRN1-203ENST00000328863 CEP57Q86XR8 500 aa16.08■□□□□ 0.16
CLRN1-203ENST00000328863 SMRP1Q8NCR6 262 aa16.08■□□□□ 0.16
CLRN1-203ENST00000328863 VN1R2Q8NFZ6 395 aa16.08■□□□□ 0.16
CLRN1-203ENST00000328863 TIGD1Q96MW7 591 aa16.08■□□□□ 0.16
CLRN1-203ENST00000328863 KLHL5Q96PQ7 755 aa16.08■□□□□ 0.16
CLRN1-203ENST00000328863 HSPBP1Q9NZL4 362 aa16.08■□□□□ 0.16
CLRN1-203ENST00000328863 DPP7Q9UHL4 492 aa16.08■□□□□ 0.16
CLRN1-203ENST00000328863 MTCL1Q9Y4B5 1905 aaKnown RBP16.07■□□□□ 0.16
CLRN1-203ENST00000328863 VCANP13611 3396 aa16.07■□□□□ 0.16
CLRN1-203ENST00000328863 SYN3O14994 580 aa16.07■□□□□ 0.16
CLRN1-203ENST00000328863 TEX28O15482 410 aa16.07■□□□□ 0.16
CLRN1-203ENST00000328863 HOXB8P17481 243 aaPredicted RBP16.07■□□□□ 0.16
CLRN1-203ENST00000328863 STK4Q13043 487 aa16.07■□□□□ 0.16
CLRN1-203ENST00000328863 KCNC3Q14003 757 aa16.07■□□□□ 0.16
CLRN1-203ENST00000328863 SURF1Q15526 300 aa16.07■□□□□ 0.16
CLRN1-203ENST00000328863 CLUL1Q15846 466 aa16.07■□□□□ 0.16
CLRN1-203ENST00000328863 KIAA0319Q5VV43 1072 aa16.07■□□□□ 0.16
CLRN1-203ENST00000328863 ANKRD54Q6NXT1 300 aa16.07■□□□□ 0.16
CLRN1-203ENST00000328863 CRELD2Q6UXH1 353 aaPredicted RBP16.07■□□□□ 0.16
CLRN1-203ENST00000328863 ANKS3Q6ZW76 656 aa16.07■□□□□ 0.16
CLRN1-203ENST00000328863 C12orf56Q8IXR9 622 aa16.07■□□□□ 0.16
CLRN1-203ENST00000328863 MSLNLQ96KJ4 702 aa16.07■□□□□ 0.16
CLRN1-203ENST00000328863 B3GALT6Q96L58 329 aa16.07■□□□□ 0.16
CLRN1-203ENST00000328863 ZNF560Q96MR9 790 aa16.07■□□□□ 0.16
CLRN1-203ENST00000328863 PCIF1Q9H4Z3 704 aa16.07■□□□□ 0.16
CLRN1-203ENST00000328863 SFXN1Q9H9B4 322 aa16.07■□□□□ 0.16
CLRN1-203ENST00000328863 RXFP1Q9HBX9 757 aa16.07■□□□□ 0.16
CLRN1-203ENST00000328863 CLEC1BQ9P126 229 aa16.07■□□□□ 0.16
CLRN1-203ENST00000328863 FNIP2Q9P278 1114 aa16.07■□□□□ 0.16
CLRN1-203ENST00000328863 DENND4AQ7Z401 1863 aa16.06■□□□□ 0.16
CLRN1-203ENST00000328863 ARHGEF37A1IGU5 675 aa16.06■□□□□ 0.16
CLRN1-203ENST00000328863 GOLGA8IPA6NC78 632 aa16.06■□□□□ 0.16
CLRN1-203ENST00000328863 ZNF233A6NK53 670 aa16.06■□□□□ 0.16
CLRN1-203ENST00000328863 GOLGA8JA6NMD2 632 aa16.06■□□□□ 0.16
CLRN1-203ENST00000328863 LILRB3O75022 631 aa16.06■□□□□ 0.16
CLRN1-203ENST00000328863 SMC2O95347 1197 aa16.06■□□□□ 0.16
CLRN1-203ENST00000328863 FGFR3P22607 806 aa16.06■□□□□ 0.16
CLRN1-203ENST00000328863 PAX3P23760 479 aa16.06■□□□□ 0.16
CLRN1-203ENST00000328863 HOXD13P35453 343 aa16.06■□□□□ 0.16
CLRN1-203ENST00000328863 BRCC3P46736 316 aa16.06■□□□□ 0.16
CLRN1-203ENST00000328863 CYP2J2P51589 502 aa16.06■□□□□ 0.16
CLRN1-203ENST00000328863 CLCN4P51793 760 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms