RNA–Protein interactions for RNA: ENST00000324238.6

CRLF3-201, Transcript of cytokine receptor like factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CRLF3, Length 2,957 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF3-201ENST00000324238 EHMT1Q9H9B1 1298 aa21.15■□□□□ 0.98
CRLF3-201ENST00000324238 ATRNL1Q5VV63 1379 aa21.15■□□□□ 0.98
CRLF3-201ENST00000324238 NRXN2Q9P2S2 1712 aa21.15■□□□□ 0.98
CRLF3-201ENST00000324238 POC1B-GALNT4F8VUJ3 575 aa21.15■□□□□ 0.98
CRLF3-201ENST00000324238 FOXN2P32314 431 aa21.15■□□□□ 0.98
CRLF3-201ENST00000324238 STYK1Q6J9G0 422 aa21.15■□□□□ 0.98
CRLF3-201ENST00000324238 CGB2Q6NT52 195 aa21.15■□□□□ 0.98
CRLF3-201ENST00000324238 SLC17A8Q8NDX2 589 aa21.15■□□□□ 0.98
CRLF3-201ENST00000324238 RUNDC3BQ96NL0 473 aa21.15■□□□□ 0.98
CRLF3-201ENST00000324238 DCLK3Q9C098 648 aa21.15■□□□□ 0.98
CRLF3-201ENST00000324238 LRRC37AA6NMS7 1700 aa21.14■□□□□ 0.98
CRLF3-201ENST00000324238 COL11A2P13942 1736 aaPredicted RBP21.14■□□□□ 0.98
CRLF3-201ENST00000324238 ADGRA3Q8IWK6 1321 aa21.14■□□□□ 0.98
CRLF3-201ENST00000324238 HNRNPDLO14979 420 aaKnown RBP21.14■□□□□ 0.97
CRLF3-201ENST00000324238 BANF1O75531 89 aa21.14■□□□□ 0.97
CRLF3-201ENST00000324238 GGPS1O95749 300 aa21.14■□□□□ 0.97
CRLF3-201ENST00000324238 ACOT2P49753 483 aa21.14■□□□□ 0.97
CRLF3-201ENST00000324238 CLNS1AP54105 237 aaKnown RBP21.14■□□□□ 0.97
CRLF3-201ENST00000324238 FASTKD3Q14CZ7 662 aaKnown RBP21.14■□□□□ 0.97
CRLF3-201ENST00000324238 CLEC16AQ2KHT3 1053 aa21.14■□□□□ 0.97
CRLF3-201ENST00000324238 RHBDF2Q6PJF5 856 aa21.14■□□□□ 0.97
CRLF3-201ENST00000324238 KCNV2Q8TDN2 545 aa21.14■□□□□ 0.97
CRLF3-201ENST00000324238 NSMCE1Q8WV22 266 aa21.14■□□□□ 0.97
CRLF3-201ENST00000324238 KMT5AQ9NQR1 393 aa21.14■□□□□ 0.97
CRLF3-201ENST00000324238 NQO1P15559 274 aaKnown RBP21.14■□□□□ 0.97
CRLF3-201ENST00000324238 NAA25Q14CX7 972 aa21.14■□□□□ 0.97
CRLF3-201ENST00000324238 TRMT10CQ7L0Y3 403 aaKnown RBP21.14■□□□□ 0.97
CRLF3-201ENST00000324238 SPATA21Q7Z572 469 aa21.14■□□□□ 0.97
CRLF3-201ENST00000324238 FMNL3Q8IVF7 1028 aa21.14■□□□□ 0.97
CRLF3-201ENST00000324238 ZNF516Q92618 1163 aa21.14■□□□□ 0.97
CRLF3-201ENST00000324238 FHDC1Q9C0D6 1143 aaPredicted RBP21.14■□□□□ 0.97
CRLF3-201ENST00000324238 SLCO1B3Q9NPD5 702 aa21.14■□□□□ 0.97
CRLF3-201ENST00000324238 PEX10O60683 326 aa21.13■□□□□ 0.97
CRLF3-201ENST00000324238 ANO5Q75V66 913 aa21.13■□□□□ 0.97
CRLF3-201ENST00000324238 MCOLN2Q8IZK6 566 aa21.13■□□□□ 0.97
CRLF3-201ENST00000324238 RMDN3Q96TC7 470 aa21.13■□□□□ 0.97
CRLF3-201ENST00000324238 LBHD1Q9BQE6 289 aaPredicted RBP21.13■□□□□ 0.97
CRLF3-201ENST00000324238 STMN4Q9H169 189 aaPredicted RBP21.13■□□□□ 0.97
CRLF3-201ENST00000324238 GOLGA8SH3BPF8 625 aa21.13■□□□□ 0.97
CRLF3-201ENST00000324238 GOLGA8MH3BSY2 632 aa21.13■□□□□ 0.97
CRLF3-201ENST00000324238 ANP32DO95626 131 aa21.13■□□□□ 0.97
CRLF3-201ENST00000324238 IZUMO3Q5VZ72 239 aa21.13■□□□□ 0.97
CRLF3-201ENST00000324238 MFSD5Q6N075 450 aa21.13■□□□□ 0.97
CRLF3-201ENST00000324238 C4orf33Q8N1A6 199 aa21.13■□□□□ 0.97
CRLF3-201ENST00000324238 CLEC4DQ8WXI8 215 aa21.13■□□□□ 0.97
CRLF3-201ENST00000324238 TMEM109Q9BVC6 243 aa21.13■□□□□ 0.97
CRLF3-201ENST00000324238 UVRAGQ9P2Y5 699 aa21.13■□□□□ 0.97
CRLF3-201ENST00000324238 RIPK3Q9Y572 518 aa21.13■□□□□ 0.97
CRLF3-201ENST00000324238 MTA2O94776 668 aa21.12■□□□□ 0.97
CRLF3-201ENST00000324238 SUN1O94901 812 aa21.12■□□□□ 0.97
CRLF3-201ENST00000324238 DNAJC3Q13217 504 aa21.12■□□□□ 0.97
CRLF3-201ENST00000324238 CLUL1Q15846 466 aa21.12■□□□□ 0.97
CRLF3-201ENST00000324238 ZNF365Q70YC5 407 aa21.12■□□□□ 0.97
CRLF3-201ENST00000324238 HARSP12081 509 aaKnown RBP21.12■□□□□ 0.97
CRLF3-201ENST00000324238 ITIH2P19823 946 aa21.12■□□□□ 0.97
CRLF3-201ENST00000324238 DSG3P32926 999 aa21.12■□□□□ 0.97
CRLF3-201ENST00000324238 ZNF568Q3ZCX4 644 aa21.12■□□□□ 0.97
CRLF3-201ENST00000324238 TMEM63BQ5T3F8 832 aa21.12■□□□□ 0.97
CRLF3-201ENST00000324238 SYTL5Q8TDW5 730 aaPredicted RBP21.12■□□□□ 0.97
CRLF3-201ENST00000324238 DDX27Q96GQ7 796 aaKnown RBP21.12■□□□□ 0.97
CRLF3-201ENST00000324238 TMEM8AQ9HCN3 771 aa21.12■□□□□ 0.97
CRLF3-201ENST00000324238 WHRNQ9P202 907 aa21.12■□□□□ 0.97
CRLF3-201ENST00000324238 FEM1BQ9UK73 627 aa21.12■□□□□ 0.97
CRLF3-201ENST00000324238 RASA4BC9J798 803 aa21.12■□□□□ 0.97
CRLF3-201ENST00000324238 WNT10BO00744 389 aa21.12■□□□□ 0.97
CRLF3-201ENST00000324238 P4HA2O15460 535 aa21.12■□□□□ 0.97
CRLF3-201ENST00000324238 RASA4O43374 803 aa21.12■□□□□ 0.97
CRLF3-201ENST00000324238 ATF7P17544 494 aaPredicted RBP21.12■□□□□ 0.97
CRLF3-201ENST00000324238 TNNI1P19237 187 aa21.12■□□□□ 0.97
CRLF3-201ENST00000324238 MTMR2Q13614 643 aa21.12■□□□□ 0.97
CRLF3-201ENST00000324238 P3H1Q32P28 736 aa21.12■□□□□ 0.97
CRLF3-201ENST00000324238 CEP170P1Q96L14 293 aa21.12■□□□□ 0.97
CRLF3-201ENST00000324238 TMEM237Q96Q45 408 aa21.12■□□□□ 0.97
CRLF3-201ENST00000324238 C12orf65Q9H3J6 166 aaKnown RBP21.12■□□□□ 0.97
CRLF3-201ENST00000324238 ANKLE1Q8NAG6 615 aa21.11■□□□□ 0.97
CRLF3-201ENST00000324238 CKAP2Q8WWK9 683 aa21.11■□□□□ 0.97
CRLF3-201ENST00000324238 SPIRE2Q8WWL2 714 aa21.11■□□□□ 0.97
CRLF3-201ENST00000324238 P3H4Q92791 437 aa21.11■□□□□ 0.97
CRLF3-201ENST00000324238 KIFAP3Q92845 792 aa21.11■□□□□ 0.97
CRLF3-201ENST00000324238 SERPINB12Q96P63 405 aa21.11■□□□□ 0.97
CRLF3-201ENST00000324238 DIAPH2O60879 1101 aa21.11■□□□□ 0.97
CRLF3-201ENST00000324238 UPP2O95045 317 aa21.11■□□□□ 0.97
CRLF3-201ENST00000324238 GAS8O95995 478 aa21.11■□□□□ 0.97
CRLF3-201ENST00000324238 ICAM1P05362 532 aa21.11■□□□□ 0.97
CRLF3-201ENST00000324238 DMP1Q13316 513 aaPredicted RBP21.11■□□□□ 0.97
CRLF3-201ENST00000324238 PRKG1Q13976 671 aa21.11■□□□□ 0.97
CRLF3-201ENST00000324238 SPDYE2Q495Y8 402 aa21.11■□□□□ 0.97
CRLF3-201ENST00000324238 ZBTB45Q96K62 511 aaPredicted RBP21.11■□□□□ 0.97
CRLF3-201ENST00000324238 CCDC134Q9H6E4 229 aa21.11■□□□□ 0.97
CRLF3-201ENST00000324238 SAYSD1Q9NPB0 183 aa21.11■□□□□ 0.97
CRLF3-201ENST00000324238 OAS1P00973 400 aaKnown RBP21.1■□□□□ 0.97
CRLF3-201ENST00000324238 GBP1P32455 592 aa21.1■□□□□ 0.97
CRLF3-201ENST00000324238 WDR4P57081 412 aaKnown RBP21.1■□□□□ 0.97
CRLF3-201ENST00000324238 COPS2P61201 443 aa21.1■□□□□ 0.97
CRLF3-201ENST00000324238 MYBPC2Q14324 1141 aa21.1■□□□□ 0.97
CRLF3-201ENST00000324238 ZBTB41Q5SVQ8 909 aa21.1■□□□□ 0.97
CRLF3-201ENST00000324238 ERICH1Q86X53 443 aa21.1■□□□□ 0.97
CRLF3-201ENST00000324238 C12orf50Q8NA57 414 aaPredicted RBP21.1■□□□□ 0.97
CRLF3-201ENST00000324238 ROPN1BQ9BZX4 212 aaPredicted RBP21.1■□□□□ 0.97
CRLF3-201ENST00000324238 ROPN1Q9HAT0 212 aaPredicted RBP21.1■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms