RNA–Protein interactions for RNA: ENST00000322507.12

COL12A1-201, Transcript of collagen type XII alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL12A1, Length 11,723 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-201ENST00000322507 ABCE1P61221 599 aaKnown RBP10.2□□□□□ -0.78
COL12A1-201ENST00000322507 SYDE2Q5VT97 1194 aa10.2□□□□□ -0.78
COL12A1-201ENST00000322507 ARHGAP17Q68EM7 881 aa10.2□□□□□ -0.78
COL12A1-201ENST00000322507 LRRC47Q8N1G4 583 aaKnown RBP10.2□□□□□ -0.78
COL12A1-201ENST00000322507 SYNDIG1Q9H7V2 258 aa10.2□□□□□ -0.78
COL12A1-201ENST00000322507 MCCD1P59942 119 aaPredicted RBP10.2□□□□□ -0.78
COL12A1-201ENST00000322507 UBE3AQ05086 875 aa10.2□□□□□ -0.78
COL12A1-201ENST00000322507 KLHL24Q6TFL4 600 aa10.2□□□□□ -0.78
COL12A1-201ENST00000322507 ALDH8A1Q9H2A2 487 aaPredicted RBP10.2□□□□□ -0.78
COL12A1-201ENST00000322507 MAN1B1Q9UKM7 699 aa10.2□□□□□ -0.78
COL12A1-201ENST00000322507 GOLGA8SH3BPF8 625 aa10.2□□□□□ -0.78
COL12A1-201ENST00000322507 NCLNQ969V3 563 aa10.2□□□□□ -0.78
COL12A1-201ENST00000322507 CMTM5Q96DZ9 223 aa10.2□□□□□ -0.78
COL12A1-201ENST00000322507 DLGAP2Q9P1A6 1054 aa10.2□□□□□ -0.78
COL12A1-201ENST00000322507 PVALEFA0A1B0GWK0 134 aa10.2□□□□□ -0.78
COL12A1-201ENST00000322507 SPAG6O75602 509 aa10.2□□□□□ -0.78
COL12A1-201ENST00000322507 HSPA4LO95757 839 aa10.2□□□□□ -0.78
COL12A1-201ENST00000322507 CLTBP09497 229 aa10.2□□□□□ -0.78
COL12A1-201ENST00000322507 RCVRNP35243 200 aa10.2□□□□□ -0.78
COL12A1-201ENST00000322507 PCDHB8Q9UN66 801 aa10.2□□□□□ -0.78
COL12A1-201ENST00000322507 QARSP47897 775 aaKnown RBP10.19□□□□□ -0.78
COL12A1-201ENST00000322507 SNRPFP62306 86 aaKnown RBP10.19□□□□□ -0.78
COL12A1-201ENST00000322507 GPC5P78333 572 aa10.19□□□□□ -0.78
COL12A1-201ENST00000322507 KCTD21Q4G0X4 260 aa10.19□□□□□ -0.78
COL12A1-201ENST00000322507 KLHL17Q6TDP4 642 aa10.19□□□□□ -0.78
COL12A1-201ENST00000322507 C3orf20Q8ND61 904 aa10.19□□□□□ -0.78
COL12A1-201ENST00000322507 SCN3BQ9NY72 215 aa10.19□□□□□ -0.78
COL12A1-201ENST00000322507 SMG5Q9UPR3 1016 aaKnown RBP10.19□□□□□ -0.78
COL12A1-201ENST00000322507 PLCG1P19174 1290 aa10.19□□□□□ -0.78
COL12A1-201ENST00000322507 TFAMQ00059 246 aaKnown RBP10.19□□□□□ -0.78
COL12A1-201ENST00000322507 WLSQ5T9L3 541 aa10.19□□□□□ -0.78
COL12A1-201ENST00000322507 GPKOWQ92917 476 aaPredicted RBP eCLIP10.19□□□□□ -0.78
COL12A1-201ENST00000322507 C7orf25Q9BPX7 421 aa10.19□□□□□ -0.78
COL12A1-201ENST00000322507 OSBPL10Q9BXB5 764 aa10.19□□□□□ -0.78
COL12A1-201ENST00000322507 PFDN2Q9UHV9 154 aa10.19□□□□□ -0.78
COL12A1-201ENST00000322507 LRFN2Q9ULH4 789 aa10.19□□□□□ -0.78
COL12A1-201ENST00000322507 CLIC4Q9Y696 253 aa10.19□□□□□ -0.78
COL12A1-201ENST00000322507 MED14O60244 1454 aa10.19□□□□□ -0.78
COL12A1-201ENST00000322507 PABPC1LQ4VXU2 614 aaKnown RBP10.19□□□□□ -0.78
COL12A1-201ENST00000322507 C4orf50Q6ZRC1 276 aa10.19□□□□□ -0.78
COL12A1-201ENST00000322507 UBE2TQ9NPD8 197 aaPredicted RBP10.19□□□□□ -0.78
COL12A1-201ENST00000322507 A0A1W2PQC6 194 aa10.19□□□□□ -0.78
COL12A1-201ENST00000322507 SPDYE2BA6NHP3 402 aa10.19□□□□□ -0.78
COL12A1-201ENST00000322507 MEFVO15553 781 aaPredicted RBP10.19□□□□□ -0.78
COL12A1-201ENST00000322507 SPDYE6P0CI01 402 aa10.19□□□□□ -0.78
COL12A1-201ENST00000322507 ITGAXP20702 1163 aa10.19□□□□□ -0.78
COL12A1-201ENST00000322507 DNAJC10Q8IXB1 793 aa10.19□□□□□ -0.78
COL12A1-201ENST00000322507 BLOC1S5Q8TDH9 187 aa10.19□□□□□ -0.78
COL12A1-201ENST00000322507 TBCKQ8TEA7 893 aa10.19□□□□□ -0.78
COL12A1-201ENST00000322507 ANO3Q9BYT9 981 aa10.19□□□□□ -0.78
COL12A1-201ENST00000322507 PRKAG2Q9UGJ0 569 aa10.19□□□□□ -0.78
COL12A1-201ENST00000322507 LRRN2O75325 713 aa10.19□□□□□ -0.78
COL12A1-201ENST00000322507 RALBP11234 206 aa10.19□□□□□ -0.78
COL12A1-201ENST00000322507 UGP2Q16851 508 aa10.19□□□□□ -0.78
COL12A1-201ENST00000322507 DPCR1Q3MIW9 517 aa10.19□□□□□ -0.78
COL12A1-201ENST00000322507 ALKBH5Q6P6C2 394 aaKnown RBP10.19□□□□□ -0.78
COL12A1-201ENST00000322507 FRMD8Q9BZ67 464 aaPredicted RBP10.19□□□□□ -0.78
COL12A1-201ENST00000322507 NLRP11P59045 1033 aaKnown RBP10.19□□□□□ -0.78
COL12A1-201ENST00000322507 TRIM74Q86UV6 250 aa10.19□□□□□ -0.78
COL12A1-201ENST00000322507 TRIM73Q86UV7 250 aa10.19□□□□□ -0.78
COL12A1-201ENST00000322507 HEATR4Q86WZ0 1026 aa10.19□□□□□ -0.78
COL12A1-201ENST00000322507 PXDNLA1KZ92 1463 aa10.19□□□□□ -0.78
COL12A1-201ENST00000322507 ABL1P00519 1130 aa10.19□□□□□ -0.78
COL12A1-201ENST00000322507 PHKA2P46019 1235 aa10.19□□□□□ -0.78
COL12A1-201ENST00000322507 PTH1RQ03431 593 aa10.19□□□□□ -0.78
COL12A1-201ENST00000322507 FAM47CQ5HY64 1035 aa10.19□□□□□ -0.78
COL12A1-201ENST00000322507 FAM173BQ6P4H8 233 aa10.19□□□□□ -0.78
COL12A1-201ENST00000322507 NUDT18Q6ZVK8 323 aa10.19□□□□□ -0.78
COL12A1-201ENST00000322507 ERICH1Q86X53 443 aa10.19□□□□□ -0.78
COL12A1-201ENST00000322507 PI4K2BQ8TCG2 481 aa10.19□□□□□ -0.78
COL12A1-201ENST00000322507 GOLPH3LQ9H4A5 285 aa10.19□□□□□ -0.78
COL12A1-201ENST00000322507 IP6K2Q9UHH9 426 aa10.19□□□□□ -0.78
COL12A1-201ENST00000322507 IGSF1Q8N6C5 1336 aa10.19□□□□□ -0.78
COL12A1-201ENST00000322507 ZNF879B4DU55 563 aa10.19□□□□□ -0.78
COL12A1-201ENST00000322507 PSMD3O43242 534 aa10.19□□□□□ -0.78
COL12A1-201ENST00000322507 FGGP02679 453 aa10.19□□□□□ -0.78
COL12A1-201ENST00000322507 S100A2P29034 98 aa10.19□□□□□ -0.78
COL12A1-201ENST00000322507 EPHB1P54762 984 aa10.19□□□□□ -0.78
COL12A1-201ENST00000322507 AASDHQ4L235 1098 aaPredicted RBP10.19□□□□□ -0.78
COL12A1-201ENST00000322507 ZNF667Q5HYK9 610 aa10.19□□□□□ -0.78
COL12A1-201ENST00000322507 ELMOD1Q8N336 334 aa10.19□□□□□ -0.78
COL12A1-201ENST00000322507 CABLES1Q8TDN4 633 aa10.19□□□□□ -0.78
COL12A1-201ENST00000322507 PACSIN1Q9BY11 444 aa10.19□□□□□ -0.78
COL12A1-201ENST00000322507 MYLK2Q9H1R3 596 aa10.19□□□□□ -0.78
COL12A1-201ENST00000322507 EIF4A3P38919 411 aaKnown RBP10.19□□□□□ -0.78
COL12A1-201ENST00000322507 RTKN2Q8IZC4 609 aa10.19□□□□□ -0.78
COL12A1-201ENST00000322507 DENND6BQ8NEG7 585 aa10.19□□□□□ -0.78
COL12A1-201ENST00000322507 TOR1AIP2Q8NFQ8 470 aa10.19□□□□□ -0.78
COL12A1-201ENST00000322507 GPN3Q9UHW5 284 aaPredicted RBP10.19□□□□□ -0.78
COL12A1-201ENST00000322507 CYP4F22Q6NT55 531 aa10.18□□□□□ -0.78
COL12A1-201ENST00000322507 C4orf22Q6V702 233 aa10.18□□□□□ -0.78
COL12A1-201ENST00000322507 GADL1Q6ZQY3 521 aa10.18□□□□□ -0.78
COL12A1-201ENST00000322507 GALNT6Q8NCL4 622 aa10.18□□□□□ -0.78
COL12A1-201ENST00000322507 KCNV2Q8TDN2 545 aa10.18□□□□□ -0.78
COL12A1-201ENST00000322507 SDR42E1Q8WUS8 393 aa10.18□□□□□ -0.78
COL12A1-201ENST00000322507 OSBPL5Q9H0X9 879 aaPredicted RBP10.18□□□□□ -0.78
COL12A1-201ENST00000322507 SMARCAL1Q9NZC9 954 aa10.18□□□□□ -0.78
COL12A1-201ENST00000322507 ING4Q9UNL4 249 aa10.18□□□□□ -0.78
COL12A1-201ENST00000322507 FAM196AQ6ZSG2 479 aa10.18□□□□□ -0.78
COL12A1-201ENST00000322507 TRMT2AQ8IZ69 625 aaKnown RBP10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms