RNA–Protein interactions for RNA: ENST00000320876.10

SMCHD1-201, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMCHD1, Length 8,821 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-201ENST00000320876 IL17REQ8NFR9 667 aa17.7■□□□□ 0.42
SMCHD1-201ENST00000320876 CATSPER4Q7RTX7 472 aa17.7■□□□□ 0.42
SMCHD1-201ENST00000320876 KRT35Q92764 455 aa17.7■□□□□ 0.42
SMCHD1-201ENST00000320876 VPS50Q96JG6 964 aa17.7■□□□□ 0.42
SMCHD1-201ENST00000320876 MRPL4Q9BYD3 311 aaKnown RBP17.7■□□□□ 0.42
SMCHD1-201ENST00000320876 NFKBIL1Q9UBC1 381 aaPredicted RBP17.7■□□□□ 0.42
SMCHD1-201ENST00000320876 MARCOQ9UEW3 520 aaPredicted RBP17.7■□□□□ 0.42
SMCHD1-201ENST00000320876 ACTR2P61160 394 aa17.7■□□□□ 0.42
SMCHD1-201ENST00000320876 ZCWPW2Q504Y3 356 aa17.7■□□□□ 0.42
SMCHD1-201ENST00000320876 ANKMY2Q8IV38 441 aa17.7■□□□□ 0.42
SMCHD1-201ENST00000320876 CASP10Q92851 521 aa17.7■□□□□ 0.42
SMCHD1-201ENST00000320876 ROPN1BQ9BZX4 212 aaPredicted RBP17.7■□□□□ 0.42
SMCHD1-201ENST00000320876 C2orf40Q9H1Z8 148 aa17.7■□□□□ 0.42
SMCHD1-201ENST00000320876 MANSC1Q9H8J5 431 aa17.7■□□□□ 0.42
SMCHD1-201ENST00000320876 ROPN1Q9HAT0 212 aaPredicted RBP17.7■□□□□ 0.42
SMCHD1-201ENST00000320876 MICU2Q8IYU8 434 aa17.7■□□□□ 0.42
SMCHD1-201ENST00000320876 URGCPQ8TCY9 931 aa17.7■□□□□ 0.42
SMCHD1-201ENST00000320876 FAM20AQ96MK3 541 aa17.7■□□□□ 0.42
SMCHD1-201ENST00000320876 MOV10L1Q9BXT6 1211 aaKnown RBP17.7■□□□□ 0.42
SMCHD1-201ENST00000320876 ITIH6Q6UXX5 1313 aa17.7■□□□□ 0.42
SMCHD1-201ENST00000320876 PTK7Q13308 1070 aa17.7■□□□□ 0.42
SMCHD1-201ENST00000320876 ARHGAP17Q68EM7 881 aa17.7■□□□□ 0.42
SMCHD1-201ENST00000320876 MS4A14Q96JA4 679 aa17.7■□□□□ 0.42
SMCHD1-201ENST00000320876 PLEKHF1Q96S99 279 aa17.7■□□□□ 0.42
SMCHD1-201ENST00000320876 NEU2Q9Y3R4 380 aa17.7■□□□□ 0.42
SMCHD1-201ENST00000320876 AATKQ6ZMQ8 1374 aa17.7■□□□□ 0.42
SMCHD1-201ENST00000320876 USP17L8P0C7I0 530 aa17.7■□□□□ 0.42
SMCHD1-201ENST00000320876 KYNUQ16719 465 aa17.7■□□□□ 0.42
SMCHD1-201ENST00000320876 GUF1Q8N442 669 aaKnown RBP17.7■□□□□ 0.42
SMCHD1-201ENST00000320876 OSBP2Q969R2 916 aa17.7■□□□□ 0.42
SMCHD1-201ENST00000320876 DCUN1D1Q96GG9 259 aa17.7■□□□□ 0.42
SMCHD1-201ENST00000320876 IMPAD1Q9NX62 359 aa17.7■□□□□ 0.42
SMCHD1-201ENST00000320876 PNMA3Q9UL41 463 aa17.7■□□□□ 0.42
SMCHD1-201ENST00000320876 PDE5AO76074 875 aa17.69■□□□□ 0.42
SMCHD1-201ENST00000320876 SREK1IP1Q8N9Q2 155 aaPredicted RBP17.69■□□□□ 0.42
SMCHD1-201ENST00000320876 LARGE1O95461 756 aa17.69■□□□□ 0.42
SMCHD1-201ENST00000320876 EIF2S1P05198 315 aaKnown RBP17.69■□□□□ 0.42
SMCHD1-201ENST00000320876 ITIH4Q14624 930 aa17.69■□□□□ 0.42
SMCHD1-201ENST00000320876 ANKRD40Q6AI12 368 aa17.69■□□□□ 0.42
SMCHD1-201ENST00000320876 PRKAG2Q9UGJ0 569 aa17.69■□□□□ 0.42
SMCHD1-201ENST00000320876 CLCA2Q9UQC9 943 aa17.69■□□□□ 0.42
SMCHD1-201ENST00000320876 FKBP9O95302 570 aa17.69■□□□□ 0.42
SMCHD1-201ENST00000320876 RCN1Q15293 331 aa17.69■□□□□ 0.42
SMCHD1-201ENST00000320876 SLC18A3Q16572 532 aa17.69■□□□□ 0.42
SMCHD1-201ENST00000320876 FKBP9P1Q75LS8 142 aa17.69■□□□□ 0.42
SMCHD1-201ENST00000320876 AIFM3Q96NN9 605 aa17.69■□□□□ 0.42
SMCHD1-201ENST00000320876 DDX50Q9BQ39 737 aaKnown RBP17.69■□□□□ 0.42
SMCHD1-201ENST00000320876 SIKE1Q9BRV8 207 aa17.69■□□□□ 0.42
SMCHD1-201ENST00000320876 TMEM120BA0PK00 339 aa17.69■□□□□ 0.42
SMCHD1-201ENST00000320876 SNTNA6NMZ2 147 aa17.69■□□□□ 0.42
SMCHD1-201ENST00000320876 SMAPO00193 183 aa17.69■□□□□ 0.42
SMCHD1-201ENST00000320876 TOB2Q14106 344 aaPredicted RBP17.69■□□□□ 0.42
SMCHD1-201ENST00000320876 CLMNQ96JQ2 1002 aa17.69■□□□□ 0.42
SMCHD1-201ENST00000320876 SLC40A1Q9NP59 571 aa17.69■□□□□ 0.42
SMCHD1-201ENST00000320876 PRKAB2O43741 272 aa17.69■□□□□ 0.42
SMCHD1-201ENST00000320876 ATP6V1B1P15313 513 aa17.69■□□□□ 0.42
SMCHD1-201ENST00000320876 NUP62P37198 522 aaPredicted RBP17.69■□□□□ 0.42
SMCHD1-201ENST00000320876 PIGHQ14442 188 aaPredicted RBP17.69■□□□□ 0.42
SMCHD1-201ENST00000320876 DGKHQ86XP1 1220 aa17.69■□□□□ 0.42
SMCHD1-201ENST00000320876 RFWD2Q8NHY2 731 aa17.69■□□□□ 0.42
SMCHD1-201ENST00000320876 MTERF3Q96E29 417 aa17.69■□□□□ 0.42
SMCHD1-201ENST00000320876 SOX13Q9UN79 622 aa17.69■□□□□ 0.42
SMCHD1-201ENST00000320876 TK2O00142 265 aa17.69■□□□□ 0.42
SMCHD1-201ENST00000320876 RGS5O15539 181 aa17.69■□□□□ 0.42
SMCHD1-201ENST00000320876 HPCAP84074 193 aa17.69■□□□□ 0.42
SMCHD1-201ENST00000320876 PCMTD2Q9NV79 361 aa17.69■□□□□ 0.42
SMCHD1-201ENST00000320876 DENND3A2RUS2 1198 aa17.68■□□□□ 0.42
SMCHD1-201ENST00000320876 CRKLP46109 303 aaKnown RBP17.68■□□□□ 0.42
SMCHD1-201ENST00000320876 TPI1P60174 286 aa17.68■□□□□ 0.42
SMCHD1-201ENST00000320876 EFL1Q7Z2Z2 1120 aaKnown RBP17.68■□□□□ 0.42
SMCHD1-201ENST00000320876 NBPF26B4DH59 902 aa17.68■□□□□ 0.42
SMCHD1-201ENST00000320876 KCNB1Q14721 858 aa17.68■□□□□ 0.42
SMCHD1-201ENST00000320876 SH2D3CQ8N5H7 860 aa17.68■□□□□ 0.42
SMCHD1-201ENST00000320876 NBPF15Q8N660 670 aa17.68■□□□□ 0.42
SMCHD1-201ENST00000320876 SLC35G2Q8TBE7 412 aa17.68■□□□□ 0.42
SMCHD1-201ENST00000320876 WNK4Q96J92 1243 aa17.68■□□□□ 0.42
SMCHD1-201ENST00000320876 MAML3Q96JK9 1138 aa17.68■□□□□ 0.42
SMCHD1-201ENST00000320876 ANKRD27Q96NW4 1050 aa17.68■□□□□ 0.42
SMCHD1-201ENST00000320876 XPO6Q96QU8 1125 aaKnown RBP17.68■□□□□ 0.42
SMCHD1-201ENST00000320876 ZNF185O15231 689 aa17.68■□□□□ 0.42
SMCHD1-201ENST00000320876 TMEM179Q6ZVK1 233 aa17.68■□□□□ 0.42
SMCHD1-201ENST00000320876 P3H2Q8IVL5 708 aa17.68■□□□□ 0.42
SMCHD1-201ENST00000320876 PDLIM2Q96JY6 352 aa17.68■□□□□ 0.42
SMCHD1-201ENST00000320876 ARHGEF38Q9NXL2 777 aa17.68■□□□□ 0.42
SMCHD1-201ENST00000320876 MAP3K13O43283 966 aa17.68■□□□□ 0.42
SMCHD1-201ENST00000320876 USP1O94782 785 aa17.68■□□□□ 0.42
SMCHD1-201ENST00000320876 FAM180AQ6UWF9 173 aa17.68■□□□□ 0.42
SMCHD1-201ENST00000320876 RBBP8Q99708 897 aa17.68■□□□□ 0.42
SMCHD1-201ENST00000320876 MOSPD1Q9UJG1 213 aa17.68■□□□□ 0.42
SMCHD1-201ENST00000320876 ANKARQ7Z5J8 1434 aa17.68■□□□□ 0.42
SMCHD1-201ENST00000320876 C3orf70A6NLC5 250 aaPredicted RBP17.68■□□□□ 0.42
SMCHD1-201ENST00000320876 EIF2AK2P19525 551 aaKnown RBP17.68■□□□□ 0.42
SMCHD1-201ENST00000320876 PUS3Q9BZE2 481 aaKnown RBP17.68■□□□□ 0.42
SMCHD1-201ENST00000320876 NOD2Q9HC29 1040 aa17.68■□□□□ 0.42
SMCHD1-201ENST00000320876 TSR3Q9UJK0 312 aaKnown RBP17.68■□□□□ 0.42
SMCHD1-201ENST00000320876 ZMYND8Q9ULU4 1186 aaPredicted RBP17.68■□□□□ 0.42
SMCHD1-201ENST00000320876 TBX22Q9Y458 520 aa17.68■□□□□ 0.42
SMCHD1-201ENST00000320876 EMSYQ7Z589 1322 aa17.68■□□□□ 0.42
SMCHD1-201ENST00000320876 TRPC5OSA6NMA1 111 aa17.68■□□□□ 0.42
SMCHD1-201ENST00000320876 LRRC74AQ0VAA2 488 aa17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms