RNA–Protein interactions for RNA: ENST00000311745.9

RBFOX1-201, Transcript of RNA binding fox-1 homolog 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RBFOX1, Length 3,268 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-201ENST00000311745 SART1O43290 800 aaKnown RBP10.13□□□□□ -0.79
RBFOX1-201ENST00000311745 SH3BP5O60239 455 aa10.13□□□□□ -0.79
RBFOX1-201ENST00000311745 FAM228BP0C875 321 aa10.13□□□□□ -0.79
RBFOX1-201ENST00000311745 POLR2MP0CAP2 368 aa10.13□□□□□ -0.79
RBFOX1-201ENST00000311745 NR2F2P24468 414 aa10.13□□□□□ -0.79
RBFOX1-201ENST00000311745 VPS41P49754 854 aa10.13□□□□□ -0.79
RBFOX1-201ENST00000311745 TSPY1Q01534 308 aa10.13□□□□□ -0.79
RBFOX1-201ENST00000311745 CNPY1Q3B7I2 92 aa10.13□□□□□ -0.79
RBFOX1-201ENST00000311745 LARP7Q4G0J3 582 aaKnown RBP eCLIP10.13□□□□□ -0.79
RBFOX1-201ENST00000311745 C1orf220Q5T0J3 134 aa10.13□□□□□ -0.79
RBFOX1-201ENST00000311745 DNAAF5Q86Y56 855 aa10.13□□□□□ -0.79
RBFOX1-201ENST00000311745 ANKS4BQ8N8V4 417 aa10.13□□□□□ -0.79
RBFOX1-201ENST00000311745 ZSWIM2Q8NEG5 633 aa10.13□□□□□ -0.79
RBFOX1-201ENST00000311745 LMO3Q8TAP4 145 aa10.13□□□□□ -0.79
RBFOX1-201ENST00000311745 LZICQ8WZA0 190 aa10.13□□□□□ -0.79
RBFOX1-201ENST00000311745 USP6NLQ92738 828 aa10.13□□□□□ -0.79
RBFOX1-201ENST00000311745 TUT1Q9H6E5 874 aaKnown RBP10.13□□□□□ -0.79
RBFOX1-201ENST00000311745 SMARCAL1Q9NZC9 954 aa10.13□□□□□ -0.79
RBFOX1-201ENST00000311745 HDAC9Q9UKV0 1011 aa10.13□□□□□ -0.79
RBFOX1-201ENST00000311745 SNX12Q9UMY4 172 aa10.13□□□□□ -0.79
RBFOX1-201ENST00000311745 UBIAD1Q9Y5Z9 338 aa10.13□□□□□ -0.79
RBFOX1-201ENST00000311745 MGAMO43451 1857 aa10.13□□□□□ -0.79
RBFOX1-201ENST00000311745 CYLC1P35663 651 aaPredicted RBP10.13□□□□□ -0.79
RBFOX1-201ENST00000311745 TMED10P49755 219 aaKnown RBP10.13□□□□□ -0.79
RBFOX1-201ENST00000311745 UGCGQ16739 394 aa10.13□□□□□ -0.79
RBFOX1-201ENST00000311745 ZNF571Q7Z3V5 609 aaPredicted RBP10.13□□□□□ -0.79
RBFOX1-201ENST00000311745 CCDC197Q8NCU1 140 aa10.13□□□□□ -0.79
RBFOX1-201ENST00000311745 CEP70Q8NHQ1 597 aa10.13□□□□□ -0.79
RBFOX1-201ENST00000311745 MXRA8Q9BRK3 442 aa10.13□□□□□ -0.79
RBFOX1-201ENST00000311745 SLC38A10Q9HBR0 1119 aa10.13□□□□□ -0.79
RBFOX1-201ENST00000311745 NLRC4Q9NPP4 1024 aa10.13□□□□□ -0.79
RBFOX1-201ENST00000311745 RABGAP1Q9Y3P9 1069 aa10.13□□□□□ -0.79
RBFOX1-201ENST00000311745 ARIH1Q9Y4X5 557 aaPredicted RBP10.13□□□□□ -0.79
RBFOX1-201ENST00000311745 LINC00854A0A1B0GVQ3 168 aa10.12□□□□□ -0.79
RBFOX1-201ENST00000311745 MACROD2A1Z1Q3 448 aa10.12□□□□□ -0.79
RBFOX1-201ENST00000311745 NCK2O43639 380 aa10.12□□□□□ -0.79
RBFOX1-201ENST00000311745 STBD1O95210 358 aa10.12□□□□□ -0.79
RBFOX1-201ENST00000311745 MYCP01106 439 aaPredicted RBP10.12□□□□□ -0.79
RBFOX1-201ENST00000311745 NR3C1P04150 777 aa10.12□□□□□ -0.79
RBFOX1-201ENST00000311745 UBTFL6P0CB48 400 aaPredicted RBP10.12□□□□□ -0.79
RBFOX1-201ENST00000311745 POLR2FP61218 127 aaKnown RBP10.12□□□□□ -0.79
RBFOX1-201ENST00000311745 LACTB2Q53H82 288 aaPredicted RBP10.12□□□□□ -0.79
RBFOX1-201ENST00000311745 GJB7Q6PEY0 223 aa10.12□□□□□ -0.79
RBFOX1-201ENST00000311745 ZNF720Q7Z2F6 126 aa10.12□□□□□ -0.79
RBFOX1-201ENST00000311745 ZC3H18Q86VM9 953 aaKnown RBP10.12□□□□□ -0.79
RBFOX1-201ENST00000311745 APLFQ8IW19 511 aaPredicted RBP10.12□□□□□ -0.79
RBFOX1-201ENST00000311745 GABPB2Q8TAK5 448 aaPredicted RBP10.12□□□□□ -0.79
RBFOX1-201ENST00000311745 IFT81Q8WYA0 676 aa10.12□□□□□ -0.79
RBFOX1-201ENST00000311745 TSG101Q99816 390 aa10.12□□□□□ -0.79
RBFOX1-201ENST00000311745 IFIH1Q9BYX4 1025 aaKnown RBP10.12□□□□□ -0.79
RBFOX1-201ENST00000311745 TYW1Q9NV66 732 aaKnown RBP10.12□□□□□ -0.79
RBFOX1-201ENST00000311745 RBMX2Q9Y388 322 aaKnown RBP10.12□□□□□ -0.79
RBFOX1-201ENST00000311745 PCNTO95613 3336 aa10.12□□□□□ -0.79
RBFOX1-201ENST00000311745 IQCA1LA6NCM1 817 aa10.12□□□□□ -0.79
RBFOX1-201ENST00000311745 EIF3DO15371 548 aaKnown RBP eCLIP10.12□□□□□ -0.79
RBFOX1-201ENST00000311745 KDM1AO60341 852 aa10.12□□□□□ -0.79
RBFOX1-201ENST00000311745 ITGA2BP08514 1039 aa10.12□□□□□ -0.79
RBFOX1-201ENST00000311745 GBP1P32455 592 aa10.12□□□□□ -0.79
RBFOX1-201ENST00000311745 IFI16Q16666 785 aaKnown RBP10.12□□□□□ -0.79
RBFOX1-201ENST00000311745 OR52E8Q6IFG1 317 aa10.12□□□□□ -0.79
RBFOX1-201ENST00000311745 RAVER1Q8IY67 606 aaKnown RBP10.12□□□□□ -0.79
RBFOX1-201ENST00000311745 EIF2AQ9BY44 585 aaKnown RBP10.12□□□□□ -0.79
RBFOX1-201ENST00000311745 EURLQ9NYK6 297 aa10.12□□□□□ -0.79
RBFOX1-201ENST00000311745 SAR1BQ9Y6B6 198 aa10.12□□□□□ -0.79
RBFOX1-201ENST00000311745 SLC16A3O15427 465 aaKnown RBP10.11□□□□□ -0.79
RBFOX1-201ENST00000311745 LRRN2O75325 713 aa10.11□□□□□ -0.79
RBFOX1-201ENST00000311745 SERPING1P05155 500 aa10.11□□□□□ -0.79
RBFOX1-201ENST00000311745 PRLRP16471 622 aa10.11□□□□□ -0.79
RBFOX1-201ENST00000311745 SGSM1Q2NKQ1 1148 aa10.11□□□□□ -0.79
RBFOX1-201ENST00000311745 NFRKBQ6P4R8 1299 aa10.11□□□□□ -0.79
RBFOX1-201ENST00000311745 FAM160B2Q86V87 743 aa10.11□□□□□ -0.79
RBFOX1-201ENST00000311745 ANKK1Q8NFD2 765 aa10.11□□□□□ -0.79
RBFOX1-201ENST00000311745 SLC30A5Q8TAD4 765 aa10.11□□□□□ -0.79
RBFOX1-201ENST00000311745 PLEKHO2Q8TD55 490 aa10.11□□□□□ -0.79
RBFOX1-201ENST00000311745 DNAJC9Q8WXX5 260 aa10.11□□□□□ -0.79
RBFOX1-201ENST00000311745 LENG1Q96BZ8 264 aaPredicted RBP10.11□□□□□ -0.79
RBFOX1-201ENST00000311745 NMD3Q96D46 503 aaKnown RBP10.11□□□□□ -0.79
RBFOX1-201ENST00000311745 ERLEC1Q96DZ1 483 aa10.11□□□□□ -0.79
RBFOX1-201ENST00000311745 ZNF341Q9BYN7 854 aa10.11□□□□□ -0.79
RBFOX1-201ENST00000311745 CEP44Q9C0F1 390 aa10.11□□□□□ -0.79
RBFOX1-201ENST00000311745 AGO4Q9HCK5 861 aaKnown RBP10.11□□□□□ -0.79
RBFOX1-201ENST00000311745 GINM1Q9NU53 330 aa10.11□□□□□ -0.79
RBFOX1-201ENST00000311745 ADAM22Q9P0K1 906 aa10.11□□□□□ -0.79
RBFOX1-201ENST00000311745 FBXL5Q9UKA1 691 aa10.11□□□□□ -0.79
RBFOX1-201ENST00000311745 RIPK3Q9Y572 518 aa10.11□□□□□ -0.79
RBFOX1-201ENST00000311745 CFAP73A6NFT4 308 aa10.11□□□□□ -0.79
RBFOX1-201ENST00000311745 TISP43B9A030 160 aa10.11□□□□□ -0.79
RBFOX1-201ENST00000311745 BHMG1C9JSJ3 638 aaPredicted RBP10.11□□□□□ -0.79
RBFOX1-201ENST00000311745 CLIC2O15247 247 aa10.11□□□□□ -0.79
RBFOX1-201ENST00000311745 DDHD2O94830 711 aa10.11□□□□□ -0.79
RBFOX1-201ENST00000311745 KRT16P08779 473 aa10.11□□□□□ -0.79
RBFOX1-201ENST00000311745 UCHL3P15374 230 aa10.11□□□□□ -0.79
RBFOX1-201ENST00000311745 ATP6V1C1P21283 382 aa10.11□□□□□ -0.79
RBFOX1-201ENST00000311745 MUTP22033 750 aa10.11□□□□□ -0.79
RBFOX1-201ENST00000311745 SH3BGRP55822 239 aaPredicted RBP10.11□□□□□ -0.79
RBFOX1-201ENST00000311745 PTK2Q05397 1052 aa10.11□□□□□ -0.79
RBFOX1-201ENST00000311745 IKQ13123 557 aaPredicted RBP10.11□□□□□ -0.79
RBFOX1-201ENST00000311745 PAK2Q13177 524 aa10.11□□□□□ -0.79
RBFOX1-201ENST00000311745 CAMK2BQ13554 666 aa10.11□□□□□ -0.79
RBFOX1-201ENST00000311745 PDE1CQ14123 709 aaPredicted RBP10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms