RNA–Protein interactions for RNA: ENST00000306853.1

CSPG4P2Y-201, Transcript of CSPG4 pseudogene 2 Y-linked, humanhuman

TSL 1 (best) BASIC

Gene CSPG4P2Y, Length 795 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P2Y-201ENST00000306853 CRELD2Q6UXH1 353 aaPredicted RBP11.92□□□□□ -0.5
CSPG4P2Y-201ENST00000306853 TRIML1Q8N9V2 468 aa11.92□□□□□ -0.5
CSPG4P2Y-201ENST00000306853 RDH13Q8NBN7 331 aa11.92□□□□□ -0.5
CSPG4P2Y-201ENST00000306853 SPATA20Q8TB22 786 aa11.92□□□□□ -0.5
CSPG4P2Y-201ENST00000306853 CACTINQ8WUQ7 758 aaKnown RBP11.92□□□□□ -0.5
CSPG4P2Y-201ENST00000306853 ANKRD36BP1Q96IX9 119 aa11.92□□□□□ -0.5
CSPG4P2Y-201ENST00000306853 FNBP1Q96RU3 617 aa11.92□□□□□ -0.5
CSPG4P2Y-201ENST00000306853 PAAF1Q9BRP4 392 aa11.92□□□□□ -0.5
CSPG4P2Y-201ENST00000306853 ZBP1Q9H171 429 aa11.92□□□□□ -0.5
CSPG4P2Y-201ENST00000306853 CLSTN2Q9H4D0 955 aa11.92□□□□□ -0.5
CSPG4P2Y-201ENST00000306853 MRPL17Q9NRX2 175 aaKnown RBP11.92□□□□□ -0.5
CSPG4P2Y-201ENST00000306853 MAN1B1Q9UKM7 699 aa11.92□□□□□ -0.5
CSPG4P2Y-201ENST00000306853 R3HCC1Q9Y3T6 440 aaKnown RBP11.92□□□□□ -0.5
CSPG4P2Y-201ENST00000306853 F8W810 466 aa11.91□□□□□ -0.5
CSPG4P2Y-201ENST00000306853 C2CD2LO14523 706 aa11.91□□□□□ -0.5
CSPG4P2Y-201ENST00000306853 PSMA7O14818 248 aa11.91□□□□□ -0.5
CSPG4P2Y-201ENST00000306853 MEFVO15553 781 aaPredicted RBP11.91□□□□□ -0.5
CSPG4P2Y-201ENST00000306853 CXCL14O95715 111 aa11.91□□□□□ -0.5
CSPG4P2Y-201ENST00000306853 TNNC2P02585 160 aa11.91□□□□□ -0.5
CSPG4P2Y-201ENST00000306853 SRGAP2BP0DMP2 458 aa11.91□□□□□ -0.5
CSPG4P2Y-201ENST00000306853 NR2F2P24468 414 aa11.91□□□□□ -0.5
CSPG4P2Y-201ENST00000306853 RPL13P26373 211 aaKnown RBP11.91□□□□□ -0.5
CSPG4P2Y-201ENST00000306853 LRPAP1P30533 357 aa11.91□□□□□ -0.5
CSPG4P2Y-201ENST00000306853 PRCPP42785 496 aa11.91□□□□□ -0.5
CSPG4P2Y-201ENST00000306853 TFAMQ00059 246 aaKnown RBP11.91□□□□□ -0.5
CSPG4P2Y-201ENST00000306853 CREMQ03060 361 aa11.91□□□□□ -0.5
CSPG4P2Y-201ENST00000306853 USP41Q3LFD5 358 aa11.91□□□□□ -0.5
CSPG4P2Y-201ENST00000306853 COBLL1Q53SF7 1204 aa11.91□□□□□ -0.5
CSPG4P2Y-201ENST00000306853 SPATA1Q5VX52 437 aa11.91□□□□□ -0.5
CSPG4P2Y-201ENST00000306853 CEP135Q66GS9 1140 aa11.91□□□□□ -0.5
CSPG4P2Y-201ENST00000306853 EP400NLQ6ZTU2 488 aa11.91□□□□□ -0.5
CSPG4P2Y-201ENST00000306853 CEP57Q86XR8 500 aa11.91□□□□□ -0.5
CSPG4P2Y-201ENST00000306853 CBWD2Q8IUF1 395 aa11.91□□□□□ -0.5
CSPG4P2Y-201ENST00000306853 SLC9A9Q8IVB4 645 aa11.91□□□□□ -0.5
CSPG4P2Y-201ENST00000306853 ZSWIM2Q8NEG5 633 aa11.91□□□□□ -0.5
CSPG4P2Y-201ENST00000306853 ZNF560Q96MR9 790 aa11.91□□□□□ -0.5
CSPG4P2Y-201ENST00000306853 CDCA3Q99618 268 aaPredicted RBP11.91□□□□□ -0.5
CSPG4P2Y-201ENST00000306853 EMILIN2Q9BXX0 1053 aa11.91□□□□□ -0.5
CSPG4P2Y-201ENST00000306853 KIAA1468Q9P260 1216 aa11.91□□□□□ -0.5
CSPG4P2Y-201ENST00000306853 TRAF3IP3Q9Y228 551 aa11.91□□□□□ -0.5
CSPG4P2Y-201ENST00000306853 NCK2O43639 380 aa11.9□□□□□ -0.5
CSPG4P2Y-201ENST00000306853 DLATP10515 647 aaKnown RBP11.9□□□□□ -0.5
CSPG4P2Y-201ENST00000306853 TNNI1P19237 187 aa11.9□□□□□ -0.5
CSPG4P2Y-201ENST00000306853 NRIP1P48552 1158 aa11.9□□□□□ -0.5
CSPG4P2Y-201ENST00000306853 GUCY2FP51841 1108 aa11.9□□□□□ -0.5
CSPG4P2Y-201ENST00000306853 CYP24A1Q07973 514 aa11.9□□□□□ -0.5
CSPG4P2Y-201ENST00000306853 CAMK1Q14012 370 aa11.9□□□□□ -0.5
CSPG4P2Y-201ENST00000306853 MYBPC2Q14324 1141 aa11.9□□□□□ -0.5
CSPG4P2Y-201ENST00000306853 NFIL3Q16649 462 aa11.9□□□□□ -0.5
CSPG4P2Y-201ENST00000306853 EDRF1Q3B7T1 1238 aa11.9□□□□□ -0.5
CSPG4P2Y-201ENST00000306853 FAM171A1Q5VUB5 890 aa11.9□□□□□ -0.5
CSPG4P2Y-201ENST00000306853 KLHL10Q6JEL2 608 aa11.9□□□□□ -0.5
CSPG4P2Y-201ENST00000306853 PDXDC1Q6P996 788 aa11.9□□□□□ -0.5
CSPG4P2Y-201ENST00000306853 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.9□□□□□ -0.5
CSPG4P2Y-201ENST00000306853 USP37Q86T82 979 aa11.9□□□□□ -0.5
CSPG4P2Y-201ENST00000306853 RBM23Q86U06 439 aaKnown RBP11.9□□□□□ -0.5
CSPG4P2Y-201ENST00000306853 WDR49Q8IV35 697 aa11.9□□□□□ -0.5
CSPG4P2Y-201ENST00000306853 EFCAB13Q8IY85 973 aa11.9□□□□□ -0.5
CSPG4P2Y-201ENST00000306853 FBXL18Q96ME1 805 aa11.9□□□□□ -0.5
CSPG4P2Y-201ENST00000306853 TTPALQ9BTX7 342 aa11.9□□□□□ -0.5
CSPG4P2Y-201ENST00000306853 VN1R3Q9BXE9 311 aa11.9□□□□□ -0.5
CSPG4P2Y-201ENST00000306853 IGFLR1Q9H665 355 aa11.9□□□□□ -0.5
CSPG4P2Y-201ENST00000306853 TLE6Q9H808 572 aa11.9□□□□□ -0.5
CSPG4P2Y-201ENST00000306853 PDE11AQ9HCR9 933 aa11.9□□□□□ -0.5
CSPG4P2Y-201ENST00000306853 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP11.9□□□□□ -0.5
CSPG4P2Y-201ENST00000306853 DPP3Q9NY33 737 aa11.9□□□□□ -0.5
CSPG4P2Y-201ENST00000306853 PCDHGC5Q9Y5F6 944 aa11.9□□□□□ -0.5
CSPG4P2Y-201ENST00000306853 BICDL2A1A5D9 508 aa11.89□□□□□ -0.51
CSPG4P2Y-201ENST00000306853 ARHGEF37A1IGU5 675 aa11.89□□□□□ -0.51
CSPG4P2Y-201ENST00000306853 SPDYE4A6NLX3 237 aa11.89□□□□□ -0.51
CSPG4P2Y-201ENST00000306853 CETN3O15182 167 aa11.89□□□□□ -0.51
CSPG4P2Y-201ENST00000306853 CLSTN1O94985 981 aa11.89□□□□□ -0.51
CSPG4P2Y-201ENST00000306853 KRT19P08727 400 aa11.89□□□□□ -0.51
CSPG4P2Y-201ENST00000306853 KRT13P13646 458 aa11.89□□□□□ -0.51
CSPG4P2Y-201ENST00000306853 PTMSP20962 102 aa11.89□□□□□ -0.51
CSPG4P2Y-201ENST00000306853 PAX3P23760 479 aa11.89□□□□□ -0.51
CSPG4P2Y-201ENST00000306853 BRCC3P46736 316 aa11.89□□□□□ -0.51
CSPG4P2Y-201ENST00000306853 NDUFV1P49821 464 aa11.89□□□□□ -0.51
CSPG4P2Y-201ENST00000306853 DSG1Q02413 1049 aa11.89□□□□□ -0.51
CSPG4P2Y-201ENST00000306853 LRRC63Q05C16 580 aa11.89□□□□□ -0.51
CSPG4P2Y-201ENST00000306853 MORC3Q14149 939 aa11.89□□□□□ -0.51
CSPG4P2Y-201ENST00000306853 PSMD6Q15008 389 aa11.89□□□□□ -0.51
CSPG4P2Y-201ENST00000306853 PTPN14Q15678 1187 aa11.89□□□□□ -0.51
CSPG4P2Y-201ENST00000306853 ZBTB6Q15916 424 aa11.89□□□□□ -0.51
CSPG4P2Y-201ENST00000306853 LMBRD2Q68DH5 695 aaPredicted RBP11.89□□□□□ -0.51
CSPG4P2Y-201ENST00000306853 DSTYKQ6XUX3 929 aa11.89□□□□□ -0.51
CSPG4P2Y-201ENST00000306853 ADGRD2Q7Z7M1 963 aa11.89□□□□□ -0.51
CSPG4P2Y-201ENST00000306853 RNF168Q8IYW5 571 aaPredicted RBP11.89□□□□□ -0.51
CSPG4P2Y-201ENST00000306853 ADSSL1Q8N142 457 aa11.89□□□□□ -0.51
CSPG4P2Y-201ENST00000306853 C3orf58Q8NDZ4 430 aa11.89□□□□□ -0.51
CSPG4P2Y-201ENST00000306853 TMEM174Q8WUU8 243 aa11.89□□□□□ -0.51
CSPG4P2Y-201ENST00000306853 AUTS2Q8WXX7 1259 aa11.89□□□□□ -0.51
CSPG4P2Y-201ENST00000306853 RIN2Q8WYP3 895 aaPredicted RBP11.89□□□□□ -0.51
CSPG4P2Y-201ENST00000306853 DHTKD1Q96HY7 919 aaPredicted RBP11.89□□□□□ -0.51
CSPG4P2Y-201ENST00000306853 CGRRF1Q99675 332 aa11.89□□□□□ -0.51
CSPG4P2Y-201ENST00000306853 GPR62Q9BZJ7 368 aa11.89□□□□□ -0.51
CSPG4P2Y-201ENST00000306853 MTMR12Q9C0I1 747 aa11.89□□□□□ -0.51
CSPG4P2Y-201ENST00000306853 CLDND1Q9NY35 253 aa11.89□□□□□ -0.51
CSPG4P2Y-201ENST00000306853 ITGA11Q9UKX5 1188 aa11.89□□□□□ -0.51
CSPG4P2Y-201ENST00000306853 CTNND2Q9UQB3 1225 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms