RNA–Protein interactions for RNA: ENST00000302631.7

SCAMP3-201, Transcript of secretory carrier membrane protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCAMP3, Length 1,446 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP3-201ENST00000302631 NRP1O14786 923 aa21.67■■□□□ 1.06
SCAMP3-201ENST00000302631 C4BPAP04003 597 aaKnown RBP21.67■■□□□ 1.06
SCAMP3-201ENST00000302631 DLATP10515 647 aaKnown RBP21.67■■□□□ 1.06
SCAMP3-201ENST00000302631 KRT13P13646 458 aa21.67■■□□□ 1.06
SCAMP3-201ENST00000302631 BMPR1AP36894 532 aa21.67■■□□□ 1.06
SCAMP3-201ENST00000302631 SLC11A1P49279 550 aa21.67■■□□□ 1.06
SCAMP3-201ENST00000302631 UPP1Q16831 310 aa21.67■■□□□ 1.06
SCAMP3-201ENST00000302631 TPD52L1Q16890 204 aaPredicted RBP21.67■■□□□ 1.06
SCAMP3-201ENST00000302631 DUOXA2Q1HG44 320 aa21.67■■□□□ 1.06
SCAMP3-201ENST00000302631 C15orf39Q6ZRI6 1047 aa21.67■■□□□ 1.06
SCAMP3-201ENST00000302631 TGS1Q96RS0 853 aaKnown RBP21.67■■□□□ 1.06
SCAMP3-201ENST00000302631 PAAF1Q9BRP4 392 aa21.67■■□□□ 1.06
SCAMP3-201ENST00000302631 PLVAPQ9BX97 442 aa21.67■■□□□ 1.06
SCAMP3-201ENST00000302631 GOLGA2P5Q9HBQ8 144 aa21.67■■□□□ 1.06
SCAMP3-201ENST00000302631 AAASQ9NRG9 546 aa21.67■■□□□ 1.06
SCAMP3-201ENST00000302631 SAMSN1Q9NSI8 373 aaKnown RBP21.67■■□□□ 1.06
SCAMP3-201ENST00000302631 DPP3Q9NY33 737 aa21.67■■□□□ 1.06
SCAMP3-201ENST00000302631 TMEM265A0A087WTH1 108 aa21.66■■□□□ 1.06
SCAMP3-201ENST00000302631 PIRO00625 290 aa21.66■■□□□ 1.06
SCAMP3-201ENST00000302631 ZC3H11AO75152 810 aaKnown RBP eCLIP21.66■■□□□ 1.06
SCAMP3-201ENST00000302631 EFEMP2O95967 443 aa21.66■■□□□ 1.06
SCAMP3-201ENST00000302631 RB1P06400 928 aa21.66■■□□□ 1.06
SCAMP3-201ENST00000302631 TNNI1P19237 187 aa21.66■■□□□ 1.06
SCAMP3-201ENST00000302631 GTF2H1P32780 548 aa21.66■■□□□ 1.06
SCAMP3-201ENST00000302631 TFAMQ00059 246 aaKnown RBP21.66■■□□□ 1.06
SCAMP3-201ENST00000302631 LMBRD2Q68DH5 695 aaPredicted RBP21.66■■□□□ 1.06
SCAMP3-201ENST00000302631 CD300LGQ6UXG3 332 aa21.66■■□□□ 1.06
SCAMP3-201ENST00000302631 SLC39A11Q8N1S5 342 aa21.66■■□□□ 1.06
SCAMP3-201ENST00000302631 C1orf127Q8N9H9 656 aa21.66■■□□□ 1.06
SCAMP3-201ENST00000302631 SLC35C1Q96A29 364 aa21.66■■□□□ 1.06
SCAMP3-201ENST00000302631 TIFAQ96CG3 184 aa21.66■■□□□ 1.06
SCAMP3-201ENST00000302631 ANKRD36BP1Q96IX9 119 aa21.66■■□□□ 1.06
SCAMP3-201ENST00000302631 CNOT6LQ96LI5 555 aaKnown RBP21.66■■□□□ 1.06
SCAMP3-201ENST00000302631 ZNF558Q96NG5 402 aa21.66■■□□□ 1.06
SCAMP3-201ENST00000302631 FAN1Q9Y2M0 1017 aa21.66■■□□□ 1.06
SCAMP3-201ENST00000302631 CASTOR2A6NHX0 329 aa21.65■■□□□ 1.06
SCAMP3-201ENST00000302631 SMTNL1A8MU46 457 aa21.65■■□□□ 1.06
SCAMP3-201ENST00000302631 SOX1O00570 391 aaPredicted RBP21.65■■□□□ 1.06
SCAMP3-201ENST00000302631 ZNF18P17022 549 aa21.65■■□□□ 1.06
SCAMP3-201ENST00000302631 ALDH7A1P49419 539 aaKnown RBP21.65■■□□□ 1.06
SCAMP3-201ENST00000302631 CLCNKBP51801 687 aa21.65■■□□□ 1.06
SCAMP3-201ENST00000302631 GUCY2FP51841 1108 aa21.65■■□□□ 1.06
SCAMP3-201ENST00000302631 PPP3CAQ08209 521 aa21.65■■□□□ 1.06
SCAMP3-201ENST00000302631 CCDC40Q4G0X9 1142 aa21.65■■□□□ 1.06
SCAMP3-201ENST00000302631 DCLRE1AQ6PJP8 1040 aa21.65■■□□□ 1.06
SCAMP3-201ENST00000302631 TRAPPC11Q7Z392 1133 aa21.65■■□□□ 1.06
SCAMP3-201ENST00000302631 SPRED2Q7Z698 418 aa21.65■■□□□ 1.06
SCAMP3-201ENST00000302631 FAM114A1Q8IWE2 563 aa21.65■■□□□ 1.06
SCAMP3-201ENST00000302631 TMEM130Q8N3G9 435 aa21.65■■□□□ 1.06
SCAMP3-201ENST00000302631 AOPEPQ8N6M6 819 aa21.65■■□□□ 1.06
SCAMP3-201ENST00000302631 C17orf80Q9BSJ5 609 aa21.65■■□□□ 1.06
SCAMP3-201ENST00000302631 MTMR12Q9C0I1 747 aa21.65■■□□□ 1.06
SCAMP3-201ENST00000302631 SLC28A3Q9HAS3 691 aa21.65■■□□□ 1.06
SCAMP3-201ENST00000302631 CBX8Q9HC52 389 aa21.65■■□□□ 1.06
SCAMP3-201ENST00000302631 FANCLQ9NW38 375 aa21.65■■□□□ 1.06
SCAMP3-201ENST00000302631 MARCH5Q9NX47 278 aa21.65■■□□□ 1.06
SCAMP3-201ENST00000302631 SIX4Q9UIU6 781 aa21.65■■□□□ 1.06
SCAMP3-201ENST00000302631 ITGA11Q9UKX5 1188 aa21.65■■□□□ 1.06
SCAMP3-201ENST00000302631 PLXNA4Q9HCM2 1894 aa21.65■■□□□ 1.06
SCAMP3-201ENST00000302631 PMM2O15305 246 aa21.64■■□□□ 1.06
SCAMP3-201ENST00000302631 TMEM191BP0C7N4 346 aa21.64■■□□□ 1.06
SCAMP3-201ENST00000302631 OR1G1P47890 313 aa21.64■■□□□ 1.06
SCAMP3-201ENST00000302631 ZACNQ401N2 412 aa21.64■■□□□ 1.06
SCAMP3-201ENST00000302631 SPOUT1Q5T280 376 aaKnown RBP21.64■■□□□ 1.06
SCAMP3-201ENST00000302631 C9orf57Q5W0N0 161 aa21.64■■□□□ 1.06
SCAMP3-201ENST00000302631 PPP2R2DQ66LE6 453 aa21.64■■□□□ 1.06
SCAMP3-201ENST00000302631 FAM84AQ96KN4 292 aa21.64■■□□□ 1.06
SCAMP3-201ENST00000302631 TSPY26PQ9H489 355 aa21.64■■□□□ 1.06
SCAMP3-201ENST00000302631 CACNG4Q9UBN1 327 aa21.64■■□□□ 1.06
SCAMP3-201ENST00000302631 PCDHB12Q9Y5F1 795 aa21.64■■□□□ 1.06
SCAMP3-201ENST00000302631 PODXLO00592 558 aa21.63■■□□□ 1.05
SCAMP3-201ENST00000302631 STX10O60499 249 aa21.63■■□□□ 1.05
SCAMP3-201ENST00000302631 TNNC2P02585 160 aa21.63■■□□□ 1.05
SCAMP3-201ENST00000302631 TRIM49P0CI25 452 aa21.63■■□□□ 1.05
SCAMP3-201ENST00000302631 TRIM49CP0CI26 452 aa21.63■■□□□ 1.05
SCAMP3-201ENST00000302631 EEF1GP26641 437 aaKnown RBP21.63■■□□□ 1.05
SCAMP3-201ENST00000302631 PPM1AP35813 382 aa21.63■■□□□ 1.05
SCAMP3-201ENST00000302631 PLCB3Q01970 1234 aa21.63■■□□□ 1.05
SCAMP3-201ENST00000302631 EPC2Q52LR7 807 aa21.63■■□□□ 1.05
SCAMP3-201ENST00000302631 SCARA3Q6AZY7 606 aa21.63■■□□□ 1.05
SCAMP3-201ENST00000302631 SV2AQ7L0J3 742 aa21.63■■□□□ 1.05
SCAMP3-201ENST00000302631 TMEM173Q86WV6 379 aaPredicted RBP21.63■■□□□ 1.05
SCAMP3-201ENST00000302631 C3orf58Q8NDZ4 430 aa21.63■■□□□ 1.05
SCAMP3-201ENST00000302631 FAM200AQ8TCP9 573 aa21.63■■□□□ 1.05
SCAMP3-201ENST00000302631 IGSF21Q96ID5 467 aa21.63■■□□□ 1.05
SCAMP3-201ENST00000302631 COLEC11Q9BWP8 271 aa21.63■■□□□ 1.05
SCAMP3-201ENST00000302631 SPG21Q9NZD8 308 aa21.63■■□□□ 1.05
SCAMP3-201ENST00000302631 NT5C1B-RDH14C9J2C7 533 aa21.63■■□□□ 1.05
SCAMP3-201ENST00000302631 PAX3P23760 479 aa21.63■■□□□ 1.05
SCAMP3-201ENST00000302631 IGFBP6P24592 240 aaPredicted RBP21.63■■□□□ 1.05
SCAMP3-201ENST00000302631 PBX3P40426 434 aa21.63■■□□□ 1.05
SCAMP3-201ENST00000302631 AARSP49588 968 aaKnown RBP eCLIP21.63■■□□□ 1.05
SCAMP3-201ENST00000302631 TCP11X2Q5H9J9 407 aa21.63■■□□□ 1.05
SCAMP3-201ENST00000302631 HABP4Q5JVS0 413 aaKnown RBP21.63■■□□□ 1.05
SCAMP3-201ENST00000302631 TDRD10Q5VZ19 366 aaKnown RBP21.63■■□□□ 1.05
SCAMP3-201ENST00000302631 RNF168Q8IYW5 571 aaPredicted RBP21.63■■□□□ 1.05
SCAMP3-201ENST00000302631 BCL7CQ8WUZ0 217 aaPredicted RBP21.63■■□□□ 1.05
SCAMP3-201ENST00000302631 TMEM8AQ9HCN3 771 aa21.63■■□□□ 1.05
SCAMP3-201ENST00000302631 COQ4Q9Y3A0 265 aa21.63■■□□□ 1.05
SCAMP3-201ENST00000302631 LRRC10BA6NIK2 292 aa21.62■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms