RNA–Protein interactions for RNA: ENST00000265304.10

SSBP1-201, Transcript of single stranded DNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSBP1, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-201ENST00000265304 ALDH2P05091 517 aa15.44■□□□□ 0.06
SSBP1-201ENST00000265304 RB1P06400 928 aa15.44■□□□□ 0.06
SSBP1-201ENST00000265304 KRT13P13646 458 aa15.44■□□□□ 0.06
SSBP1-201ENST00000265304 AARSP49588 968 aaKnown RBP eCLIP15.44■□□□□ 0.06
SSBP1-201ENST00000265304 RABGGTBP53611 331 aa15.44■□□□□ 0.06
SSBP1-201ENST00000265304 ERVK-21P61565 698 aa15.44■□□□□ 0.06
SSBP1-201ENST00000265304 DLG4P78352 724 aa15.44■□□□□ 0.06
SSBP1-201ENST00000265304 PPP3CAQ08209 521 aa15.44■□□□□ 0.06
SSBP1-201ENST00000265304 FAM117BQ6P1L5 589 aa15.44■□□□□ 0.06
SSBP1-201ENST00000265304 DCLRE1AQ6PJP8 1040 aa15.44■□□□□ 0.06
SSBP1-201ENST00000265304 CD300LGQ6UXG3 332 aa15.44■□□□□ 0.06
SSBP1-201ENST00000265304 APTXQ7Z2E3 356 aaKnown RBP15.44■□□□□ 0.06
SSBP1-201ENST00000265304 OR5B17Q8NGF7 314 aa15.44■□□□□ 0.06
SSBP1-201ENST00000265304 KIF12Q96FN5 646 aa15.44■□□□□ 0.06
SSBP1-201ENST00000265304 VRTNQ9H8Y1 702 aa15.44■□□□□ 0.06
SSBP1-201ENST00000265304 CBX8Q9HC52 389 aa15.44■□□□□ 0.06
SSBP1-201ENST00000265304 FANCLQ9NW38 375 aa15.44■□□□□ 0.06
SSBP1-201ENST00000265304 ITGA11Q9UKX5 1188 aa15.44■□□□□ 0.06
SSBP1-201ENST00000265304 P4HA2O15460 535 aa15.43■□□□□ 0.06
SSBP1-201ENST00000265304 STX10O60499 249 aa15.43■□□□□ 0.06
SSBP1-201ENST00000265304 LAG3P18627 525 aa15.43■□□□□ 0.06
SSBP1-201ENST00000265304 BMPR1AP36894 532 aa15.43■□□□□ 0.06
SSBP1-201ENST00000265304 BCAR1P56945 870 aa15.43■□□□□ 0.06
SSBP1-201ENST00000265304 TAP1Q03518 808 aa15.43■□□□□ 0.06
SSBP1-201ENST00000265304 TCP11X2Q5H9J9 407 aa15.43■□□□□ 0.06
SSBP1-201ENST00000265304 GLRA4Q5JXX5 417 aa15.43■□□□□ 0.06
SSBP1-201ENST00000265304 SMYD5Q6GMV2 418 aa15.43■□□□□ 0.06
SSBP1-201ENST00000265304 KCNT2Q6UVM3 1135 aa15.43■□□□□ 0.06
SSBP1-201ENST00000265304 SV2AQ7L0J3 742 aa15.43■□□□□ 0.06
SSBP1-201ENST00000265304 TRAPPC11Q7Z392 1133 aa15.43■□□□□ 0.06
SSBP1-201ENST00000265304 GPR65Q8IYL9 337 aa15.43■□□□□ 0.06
SSBP1-201ENST00000265304 RNF168Q8IYW5 571 aaPredicted RBP15.43■□□□□ 0.06
SSBP1-201ENST00000265304 C1orf127Q8N9H9 656 aa15.43■□□□□ 0.06
SSBP1-201ENST00000265304 BEST2Q8NFU1 509 aa15.43■□□□□ 0.06
SSBP1-201ENST00000265304 C18orf25Q96B23 403 aaPredicted RBP15.43■□□□□ 0.06
SSBP1-201ENST00000265304 CCDC127Q96BQ5 260 aa15.43■□□□□ 0.06
SSBP1-201ENST00000265304 CNOT6LQ96LI5 555 aaKnown RBP15.43■□□□□ 0.06
SSBP1-201ENST00000265304 FNBP1Q96RU3 617 aa15.43■□□□□ 0.06
SSBP1-201ENST00000265304 POP1Q99575 1024 aaKnown RBP15.43■□□□□ 0.06
SSBP1-201ENST00000265304 TSPY26PQ9H489 355 aa15.43■□□□□ 0.06
SSBP1-201ENST00000265304 DPP3Q9NY33 737 aa15.43■□□□□ 0.06
SSBP1-201ENST00000265304 DNAJB4Q9UDY4 337 aa15.43■□□□□ 0.06
SSBP1-201ENST00000265304 LIMA1Q9UHB6 759 aaKnown RBP15.43■□□□□ 0.06
SSBP1-201ENST00000265304 SIX4Q9UIU6 781 aa15.43■□□□□ 0.06
SSBP1-201ENST00000265304 MSRAQ9UJ68 235 aa15.43■□□□□ 0.06
SSBP1-201ENST00000265304 INPP5FQ9Y2H2 1132 aa15.43■□□□□ 0.06
SSBP1-201ENST00000265304 PLXNA4Q9HCM2 1894 aa15.43■□□□□ 0.06
SSBP1-201ENST00000265304 NRP1O14786 923 aa15.42■□□□□ 0.06
SSBP1-201ENST00000265304 ARHGEF15O94989 841 aa15.42■□□□□ 0.06
SSBP1-201ENST00000265304 MYOGP15173 224 aa15.42■□□□□ 0.06
SSBP1-201ENST00000265304 PBX2P40425 430 aa15.42■□□□□ 0.06
SSBP1-201ENST00000265304 SLC11A1P49279 550 aa15.42■□□□□ 0.06
SSBP1-201ENST00000265304 PLCB3Q01970 1234 aa15.42■□□□□ 0.06
SSBP1-201ENST00000265304 RNASELQ05823 741 aaKnown RBP15.42■□□□□ 0.06
SSBP1-201ENST00000265304 SPAG1Q07617 926 aa15.42■□□□□ 0.06
SSBP1-201ENST00000265304 C9orf57Q5W0N0 161 aa15.42■□□□□ 0.06
SSBP1-201ENST00000265304 GPR153Q6NV75 609 aa15.42■□□□□ 0.06
SSBP1-201ENST00000265304 LIMS2Q7Z4I7 341 aa15.42■□□□□ 0.06
SSBP1-201ENST00000265304 SLC39A11Q8N1S5 342 aa15.42■□□□□ 0.06
SSBP1-201ENST00000265304 AOPEPQ8N6M6 819 aa15.42■□□□□ 0.06
SSBP1-201ENST00000265304 LRRC52Q8N7C0 313 aa15.42■□□□□ 0.06
SSBP1-201ENST00000265304 COLGALT1Q8NBJ5 622 aa15.42■□□□□ 0.06
SSBP1-201ENST00000265304 FAXDC2Q96IV6 333 aa15.42■□□□□ 0.06
SSBP1-201ENST00000265304 ANKRD36BP1Q96IX9 119 aa15.42■□□□□ 0.06
SSBP1-201ENST00000265304 TMEM8AQ9HCN3 771 aa15.42■□□□□ 0.06
SSBP1-201ENST00000265304 AAASQ9NRG9 546 aa15.42■□□□□ 0.06
SSBP1-201ENST00000265304 HCSTQ9UBK5 93 aa15.42■□□□□ 0.06
SSBP1-201ENST00000265304 STK39Q9UEW8 545 aa15.42■□□□□ 0.06
SSBP1-201ENST00000265304 TUBGCP4Q9UGJ1 667 aa15.42■□□□□ 0.06
SSBP1-201ENST00000265304 GTPBP10A4D1E9 387 aaKnown RBP15.41■□□□□ 0.06
SSBP1-201ENST00000265304 CA3P07451 260 aa15.41■□□□□ 0.06
SSBP1-201ENST00000265304 DLATP10515 647 aaKnown RBP15.41■□□□□ 0.06
SSBP1-201ENST00000265304 TNNI1P19237 187 aa15.41■□□□□ 0.06
SSBP1-201ENST00000265304 DNAJB2P25686 324 aa15.41■□□□□ 0.06
SSBP1-201ENST00000265304 PPM1AP35813 382 aa15.41■□□□□ 0.06
SSBP1-201ENST00000265304 ALDH7A1P49419 539 aaKnown RBP15.41■□□□□ 0.06
SSBP1-201ENST00000265304 TFAMQ00059 246 aaKnown RBP15.41■□□□□ 0.06
SSBP1-201ENST00000265304 MAN2A1Q16706 1144 aa15.41■□□□□ 0.06
SSBP1-201ENST00000265304 TPD52L1Q16890 204 aaPredicted RBP15.41■□□□□ 0.06
SSBP1-201ENST00000265304 PAN2Q504Q3 1202 aaKnown RBP15.41■□□□□ 0.06
SSBP1-201ENST00000265304 MIIPQ5JXC2 388 aa15.41■□□□□ 0.06
SSBP1-201ENST00000265304 TDRD10Q5VZ19 366 aaKnown RBP15.41■□□□□ 0.06
SSBP1-201ENST00000265304 FAM212AQ96EL1 285 aa15.41■□□□□ 0.06
SSBP1-201ENST00000265304 IGSF21Q96ID5 467 aa15.41■□□□□ 0.06
SSBP1-201ENST00000265304 ZNF558Q96NG5 402 aa15.41■□□□□ 0.06
SSBP1-201ENST00000265304 TGS1Q96RS0 853 aaKnown RBP15.41■□□□□ 0.06
SSBP1-201ENST00000265304 PAAF1Q9BRP4 392 aa15.41■□□□□ 0.06
SSBP1-201ENST00000265304 COLEC11Q9BWP8 271 aa15.41■□□□□ 0.06
SSBP1-201ENST00000265304 MTMR12Q9C0I1 747 aa15.41■□□□□ 0.06
SSBP1-201ENST00000265304 XYLT2Q9H1B5 865 aa15.41■□□□□ 0.06
SSBP1-201ENST00000265304 MARCH5Q9NX47 278 aa15.41■□□□□ 0.06
SSBP1-201ENST00000265304 LZTS1Q9Y250 596 aa15.41■□□□□ 0.06
SSBP1-201ENST00000265304 FAN1Q9Y2M0 1017 aa15.41■□□□□ 0.06
SSBP1-201ENST00000265304 KCNJ18B7U540 433 aa15.4■□□□□ 0.06
SSBP1-201ENST00000265304 VNN1O95497 513 aa15.4■□□□□ 0.06
SSBP1-201ENST00000265304 CST3P01034 146 aaPredicted RBP15.4■□□□□ 0.06
SSBP1-201ENST00000265304 TNNC2P02585 160 aa15.4■□□□□ 0.06
SSBP1-201ENST00000265304 FAM163BP0C2L3 166 aa15.4■□□□□ 0.06
SSBP1-201ENST00000265304 TMEM191BP0C7N4 346 aa15.4■□□□□ 0.06
SSBP1-201ENST00000265304 ATICP31939 592 aa15.4■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms