RNA–Protein interactions for RNA: ENST00000265081.6

MSH3-201, Transcript of mutS homolog 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH3, Length 4,092 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH3-201ENST00000265081 KCNV1Q6PIU1 500 aa11.93□□□□□ -0.5
MSH3-201ENST00000265081 SH2D3CQ8N5H7 860 aa11.93□□□□□ -0.5
MSH3-201ENST00000265081 LINC01465Q8N7H1 131 aa11.93□□□□□ -0.5
MSH3-201ENST00000265081 FAM167AQ96KS9 214 aa11.93□□□□□ -0.5
MSH3-201ENST00000265081 EPN3Q9H201 632 aa11.93□□□□□ -0.5
MSH3-201ENST00000265081 WHRNQ9P202 907 aa11.93□□□□□ -0.5
MSH3-201ENST00000265081 CNOT8Q9UFF9 292 aaKnown RBP11.93□□□□□ -0.5
MSH3-201ENST00000265081 EFNA5P52803 228 aa11.93□□□□□ -0.5
MSH3-201ENST00000265081 STRN3Q13033 797 aa11.93□□□□□ -0.5
MSH3-201ENST00000265081 CCDC62Q6P9F0 684 aa11.93□□□□□ -0.5
MSH3-201ENST00000265081 EXOC8Q8IYI6 725 aa11.93□□□□□ -0.5
MSH3-201ENST00000265081 KATNAL2Q8IYT4 538 aa11.93□□□□□ -0.5
MSH3-201ENST00000265081 BBXQ8WY36 941 aaPredicted RBP11.93□□□□□ -0.5
MSH3-201ENST00000265081 GPR20Q99678 358 aa11.93□□□□□ -0.5
MSH3-201ENST00000265081 LRRC4CQ9HCJ2 640 aa11.93□□□□□ -0.5
MSH3-201ENST00000265081 RASAL2Q9UJF2 1139 aa11.93□□□□□ -0.5
MSH3-201ENST00000265081 C5orf60A6NFR6 353 aa11.92□□□□□ -0.5
MSH3-201ENST00000265081 PROSCO94903 275 aa11.92□□□□□ -0.5
MSH3-201ENST00000265081 ASS1P00966 412 aaKnown RBP11.92□□□□□ -0.5
MSH3-201ENST00000265081 PTK6Q13882 451 aa11.92□□□□□ -0.5
MSH3-201ENST00000265081 ZBTB41Q5SVQ8 909 aa11.92□□□□□ -0.5
MSH3-201ENST00000265081 RUFY4Q6ZNE9 571 aa11.92□□□□□ -0.5
MSH3-201ENST00000265081 TMEM143Q96AN5 459 aa11.92□□□□□ -0.5
MSH3-201ENST00000265081 ACO2Q99798 780 aaKnown RBP11.92□□□□□ -0.5
MSH3-201ENST00000265081 PI4K2AQ9BTU6 479 aa11.92□□□□□ -0.5
MSH3-201ENST00000265081 CPSF3Q9UKF6 684 aaKnown RBP11.92□□□□□ -0.5
MSH3-201ENST00000265081 CXCL11O14625 94 aa11.92□□□□□ -0.5
MSH3-201ENST00000265081 SLC25A27O95847 323 aa11.92□□□□□ -0.5
MSH3-201ENST00000265081 CORO7P57737 925 aa11.92□□□□□ -0.5
MSH3-201ENST00000265081 POU5F1BQ06416 359 aa11.92□□□□□ -0.5
MSH3-201ENST00000265081 SLC20A2Q08357 652 aa11.92□□□□□ -0.5
MSH3-201ENST00000265081 MESDQ14696 234 aa11.92□□□□□ -0.5
MSH3-201ENST00000265081 PTGISQ16647 500 aa11.92□□□□□ -0.5
MSH3-201ENST00000265081 FAM160B1Q5W0V3 765 aa11.92□□□□□ -0.5
MSH3-201ENST00000265081 CCDC137Q6PK04 289 aaKnown RBP11.92□□□□□ -0.5
MSH3-201ENST00000265081 TSHZ1Q6ZSZ6 1077 aa11.92□□□□□ -0.5
MSH3-201ENST00000265081 GLG1Q92896 1179 aa11.92□□□□□ -0.5
MSH3-201ENST00000265081 BTBD6Q96KE9 485 aa11.92□□□□□ -0.5
MSH3-201ENST00000265081 RBAKQ9NYW8 714 aaPredicted RBP11.92□□□□□ -0.5
MSH3-201ENST00000265081 PCDHGC3Q9UN70 934 aa11.92□□□□□ -0.5
MSH3-201ENST00000265081 LSM8O95777 96 aaKnown RBP11.92□□□□□ -0.5
MSH3-201ENST00000265081 CPP00450 1065 aa11.92□□□□□ -0.5
MSH3-201ENST00000265081 MYZAPP0CAP1 466 aa11.92□□□□□ -0.5
MSH3-201ENST00000265081 LSP1P33241 339 aa11.92□□□□□ -0.5
MSH3-201ENST00000265081 GNGT1P63211 74 aa11.92□□□□□ -0.5
MSH3-201ENST00000265081 IER5Q5VY09 327 aa11.92□□□□□ -0.5
MSH3-201ENST00000265081 YTHDF3Q7Z739 585 aaKnown RBP11.92□□□□□ -0.5
MSH3-201ENST00000265081 IFNLR1Q8IU57 520 aaPredicted RBP11.92□□□□□ -0.5
MSH3-201ENST00000265081 NIPA2Q8N8Q9 360 aa11.92□□□□□ -0.5
MSH3-201ENST00000265081 NLGN2Q8NFZ4 835 aa11.92□□□□□ -0.5
MSH3-201ENST00000265081 RNF25Q96BH1 459 aaPredicted RBP11.92□□□□□ -0.5
MSH3-201ENST00000265081 SEPT11Q9NVA2 429 aaKnown RBP11.92□□□□□ -0.5
MSH3-201ENST00000265081 NUB1Q9Y5A7 615 aa11.92□□□□□ -0.5
MSH3-201ENST00000265081 MAMLD1Q13495 774 aa11.91□□□□□ -0.5
MSH3-201ENST00000265081 MFSD5Q6N075 450 aa11.91□□□□□ -0.5
MSH3-201ENST00000265081 CXorf38Q8TB03 319 aa11.91□□□□□ -0.5
MSH3-201ENST00000265081 SLC7A3Q8WY07 619 aa11.91□□□□□ -0.5
MSH3-201ENST00000265081 ZBTB45Q96K62 511 aaPredicted RBP11.91□□□□□ -0.5
MSH3-201ENST00000265081 AAASQ9NRG9 546 aa11.91□□□□□ -0.5
MSH3-201ENST00000265081 ADARB2Q9NS39 739 aaKnown RBP11.91□□□□□ -0.5
MSH3-201ENST00000265081 NRBP2Q9NSY0 501 aa11.91□□□□□ -0.5
MSH3-201ENST00000265081 RRP15Q9Y3B9 282 aaKnown RBP11.91□□□□□ -0.5
MSH3-201ENST00000265081 DLATP10515 647 aaKnown RBP11.91□□□□□ -0.5
MSH3-201ENST00000265081 FAM187BQ17R55 369 aa11.91□□□□□ -0.5
MSH3-201ENST00000265081 CEP85LQ5SZL2 805 aa11.91□□□□□ -0.5
MSH3-201ENST00000265081 CELF3Q5SZQ8 465 aaKnown RBP11.91□□□□□ -0.5
MSH3-201ENST00000265081 DRICH1Q6PGQ1 229 aaPredicted RBP11.91□□□□□ -0.5
MSH3-201ENST00000265081 MAIP1Q8WWC4 291 aa11.91□□□□□ -0.5
MSH3-201ENST00000265081 HERPUD2Q9BSE4 406 aa11.91□□□□□ -0.5
MSH3-201ENST00000265081 FZD8Q9H461 694 aa11.91□□□□□ -0.5
MSH3-201ENST00000265081 PLEKHA4Q9H4M7 779 aa11.91□□□□□ -0.5
MSH3-201ENST00000265081 SPDYE5A6NIY4 337 aa11.91□□□□□ -0.5
MSH3-201ENST00000265081 TCEA3O75764 348 aa11.91□□□□□ -0.5
MSH3-201ENST00000265081 PIK3CAP42336 1068 aa11.91□□□□□ -0.5
MSH3-201ENST00000265081 DHX9Q08211 1270 aaKnown RBP11.91□□□□□ -0.5
MSH3-201ENST00000265081 SPATS2Q86XZ4 545 aaKnown RBP11.91□□□□□ -0.5
MSH3-201ENST00000265081 SEPT1Q8WYJ6 367 aa11.91□□□□□ -0.5
MSH3-201ENST00000265081 CCDC134Q9H6E4 229 aa11.91□□□□□ -0.5
MSH3-201ENST00000265081 AGTPBP1Q9UPW5 1226 aa11.91□□□□□ -0.5
MSH3-201ENST00000265081 TTLL13PA6NNM8 815 aa11.91□□□□□ -0.5
MSH3-201ENST00000265081 K7ERI5 159 aa11.91□□□□□ -0.5
MSH3-201ENST00000265081 TOM1L1O75674 476 aa11.91□□□□□ -0.5
MSH3-201ENST00000265081 ARIH2O95376 493 aa11.91□□□□□ -0.5
MSH3-201ENST00000265081 CFHP08603 1231 aa11.91□□□□□ -0.5
MSH3-201ENST00000265081 RARGP13631 454 aa11.91□□□□□ -0.5
MSH3-201ENST00000265081 SLC26A2P50443 739 aa11.91□□□□□ -0.5
MSH3-201ENST00000265081 PMS2P54278 862 aa11.91□□□□□ -0.5
MSH3-201ENST00000265081 WDR44Q5JSH3 913 aa11.91□□□□□ -0.5
MSH3-201ENST00000265081 OR5B17Q8NGF7 314 aa11.91□□□□□ -0.5
MSH3-201ENST00000265081 FBXO25Q8TCJ0 367 aa11.91□□□□□ -0.5
MSH3-201ENST00000265081 ADAM7Q9H2U9 754 aa11.91□□□□□ -0.5
MSH3-201ENST00000265081 MMP8P22894 467 aa11.9□□□□□ -0.5
MSH3-201ENST00000265081 RRM1P23921 792 aa11.9□□□□□ -0.5
MSH3-201ENST00000265081 STAT5BP51692 787 aa11.9□□□□□ -0.5
MSH3-201ENST00000265081 HLTFQ14527 1009 aaKnown RBP eCLIP11.9□□□□□ -0.5
MSH3-201ENST00000265081 LRRC38Q5VT99 294 aa11.9□□□□□ -0.5
MSH3-201ENST00000265081 DEPTORQ8TB45 409 aa11.9□□□□□ -0.5
MSH3-201ENST00000265081 TCP11Q8WWU5 503 aa11.9□□□□□ -0.5
MSH3-201ENST00000265081 MSTO1Q9BUK6 570 aa11.9□□□□□ -0.5
MSH3-201ENST00000265081 XYLT2Q9H1B5 865 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms