RNA–Protein interactions for RNA: ENST00000262962.11

CCDC94-201, Transcript of Coiled-coil domain-containing protein 94, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC94, Length 1,434 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC94-201ENST00000262962 TUSC3Q13454 348 aa18.32■□□□□ 0.52
CCDC94-201ENST00000262962 HABP4Q5JVS0 413 aaKnown RBP18.32■□□□□ 0.52
CCDC94-201ENST00000262962 TMEM8AQ9HCN3 771 aa18.32■□□□□ 0.52
CCDC94-201ENST00000262962 DPP3Q9NY33 737 aa18.32■□□□□ 0.52
CCDC94-201ENST00000262962 TUBGCP4Q9UGJ1 667 aa18.32■□□□□ 0.52
CCDC94-201ENST00000262962 N4BP1O75113 896 aaKnown RBP18.31■□□□□ 0.52
CCDC94-201ENST00000262962 DDHD2O94830 711 aa18.31■□□□□ 0.52
CCDC94-201ENST00000262962 AFPP02771 609 aaKnown RBP18.31■□□□□ 0.52
CCDC94-201ENST00000262962 C4BPAP04003 597 aaKnown RBP18.31■□□□□ 0.52
CCDC94-201ENST00000262962 LRPAP1P30533 357 aa18.31■□□□□ 0.52
CCDC94-201ENST00000262962 GCLMP48507 274 aa18.31■□□□□ 0.52
CCDC94-201ENST00000262962 MXI1P50539 228 aa18.31■□□□□ 0.52
CCDC94-201ENST00000262962 SOX4Q06945 474 aaPredicted RBP18.31■□□□□ 0.52
CCDC94-201ENST00000262962 KRT39Q6A163 491 aa18.31■□□□□ 0.52
CCDC94-201ENST00000262962 TRAPPC11Q7Z392 1133 aa18.31■□□□□ 0.52
CCDC94-201ENST00000262962 ZNF280BQ86YH2 543 aa18.31■□□□□ 0.52
CCDC94-201ENST00000262962 COLGALT2Q8IYK4 626 aa18.31■□□□□ 0.52
CCDC94-201ENST00000262962 C1orf127Q8N9H9 656 aa18.31■□□□□ 0.52
CCDC94-201ENST00000262962 SP7Q8TDD2 431 aaPredicted RBP18.31■□□□□ 0.52
CCDC94-201ENST00000262962 UROC1Q96N76 676 aa18.31■□□□□ 0.52
CCDC94-201ENST00000262962 NRDE2Q9H7Z3 1164 aa18.31■□□□□ 0.52
CCDC94-201ENST00000262962 ITGA11Q9UKX5 1188 aa18.31■□□□□ 0.52
CCDC94-201ENST00000262962 SCN1AP35498 2009 aa18.3■□□□□ 0.52
CCDC94-201ENST00000262962 HSFX4A0A1B0GTS1 333 aaPredicted RBP18.3■□□□□ 0.52
CCDC94-201ENST00000262962 HSFX3A0A1B0GWH4 333 aaPredicted RBP18.3■□□□□ 0.52
CCDC94-201ENST00000262962 RPL9P32969 192 aaKnown RBP18.3■□□□□ 0.52
CCDC94-201ENST00000262962 FMO5P49326 533 aa18.3■□□□□ 0.52
CCDC94-201ENST00000262962 COPB1P53618 953 aaKnown RBP18.3■□□□□ 0.52
CCDC94-201ENST00000262962 ZACNQ401N2 412 aa18.3■□□□□ 0.52
CCDC94-201ENST00000262962 VWA3BQ502W6 1294 aa18.3■□□□□ 0.52
CCDC94-201ENST00000262962 MIIPQ5JXC2 388 aa18.3■□□□□ 0.52
CCDC94-201ENST00000262962 TDRD10Q5VZ19 366 aaKnown RBP18.3■□□□□ 0.52
CCDC94-201ENST00000262962 C15orf39Q6ZRI6 1047 aa18.3■□□□□ 0.52
CCDC94-201ENST00000262962 SV2AQ7L0J3 742 aa18.3■□□□□ 0.52
CCDC94-201ENST00000262962 FIBCD1Q8N539 461 aa18.3■□□□□ 0.52
CCDC94-201ENST00000262962 TMEM175Q9BSA9 504 aa18.3■□□□□ 0.52
CCDC94-201ENST00000262962 NDST4Q9H3R1 872 aa18.3■□□□□ 0.52
CCDC94-201ENST00000262962 CWH43Q9H720 699 aa18.3■□□□□ 0.52
CCDC94-201ENST00000262962 MMRN2Q9H8L6 949 aa18.3■□□□□ 0.52
CCDC94-201ENST00000262962 GOLGA2P5Q9HBQ8 144 aa18.3■□□□□ 0.52
CCDC94-201ENST00000262962 TAB2Q9NYJ8 693 aa18.3■□□□□ 0.52
CCDC94-201ENST00000262962 PCDHA11Q9Y5I1 949 aa18.3■□□□□ 0.52
CCDC94-201ENST00000262962 CARNS1A5YM72 827 aa18.29■□□□□ 0.52
CCDC94-201ENST00000262962 CASTOR2A6NHX0 329 aa18.29■□□□□ 0.52
CCDC94-201ENST00000262962 PMM2O15305 246 aa18.29■□□□□ 0.52
CCDC94-201ENST00000262962 P4HA2O15460 535 aa18.29■□□□□ 0.52
CCDC94-201ENST00000262962 B4GALT3O60512 393 aa18.29■□□□□ 0.52
CCDC94-201ENST00000262962 ZC3H11AO75152 810 aaKnown RBP eCLIP18.29■□□□□ 0.52
CCDC94-201ENST00000262962 ITGB3P05106 788 aa18.29■□□□□ 0.52
CCDC94-201ENST00000262962 GUCY2FP51841 1108 aa18.29■□□□□ 0.52
CCDC94-201ENST00000262962 RABGGTBP53611 331 aa18.29■□□□□ 0.52
CCDC94-201ENST00000262962 BIRC3Q13489 604 aa18.29■□□□□ 0.52
CCDC94-201ENST00000262962 CBWD6Q4V339 395 aa18.29■□□□□ 0.52
CCDC94-201ENST00000262962 CBWD3Q5JTY5 395 aa18.29■□□□□ 0.52
CCDC94-201ENST00000262962 CBWD5Q5RIA9 395 aa18.29■□□□□ 0.52
CCDC94-201ENST00000262962 FAM109BQ6ICB4 259 aaPredicted RBP18.29■□□□□ 0.52
CCDC94-201ENST00000262962 APTXQ7Z2E3 356 aaKnown RBP18.29■□□□□ 0.52
CCDC94-201ENST00000262962 DDX27Q96GQ7 796 aaKnown RBP18.29■□□□□ 0.52
CCDC94-201ENST00000262962 FAM84AQ96KN4 292 aa18.29■□□□□ 0.52
CCDC94-201ENST00000262962 VPS16Q9H269 839 aa18.29■□□□□ 0.52
CCDC94-201ENST00000262962 MRPL42Q9Y6G3 142 aaKnown RBP18.29■□□□□ 0.52
CCDC94-201ENST00000262962 ANO9A1A5B4 782 aa18.28■□□□□ 0.52
CCDC94-201ENST00000262962 GRXCR1A8MXD5 290 aa18.28■□□□□ 0.52
CCDC94-201ENST00000262962 PES1O00541 588 aaKnown RBP18.28■□□□□ 0.52
CCDC94-201ENST00000262962 PHACTR2O75167 634 aa18.28■□□□□ 0.52
CCDC94-201ENST00000262962 MYL7Q01449 175 aa18.28■□□□□ 0.52
CCDC94-201ENST00000262962 CETN1Q12798 172 aa18.28■□□□□ 0.52
CCDC94-201ENST00000262962 LRIT3Q3SXY7 679 aa18.28■□□□□ 0.52
CCDC94-201ENST00000262962 C9orf57Q5W0N0 161 aa18.28■□□□□ 0.52
CCDC94-201ENST00000262962 CXorf38Q8TB03 319 aa18.28■□□□□ 0.52
CCDC94-201ENST00000262962 HCSTQ9UBK5 93 aa18.28■□□□□ 0.52
CCDC94-201ENST00000262962 DNAJB4Q9UDY4 337 aa18.28■□□□□ 0.52
CCDC94-201ENST00000262962 SIX4Q9UIU6 781 aa18.28■□□□□ 0.52
CCDC94-201ENST00000262962 R3HCC1Q9Y3T6 440 aaKnown RBP18.28■□□□□ 0.52
CCDC94-201ENST00000262962 PODXLO00592 558 aa18.27■□□□□ 0.52
CCDC94-201ENST00000262962 SERPINC1P01008 464 aa18.27■□□□□ 0.52
CCDC94-201ENST00000262962 KRT19P08727 400 aa18.27■□□□□ 0.52
CCDC94-201ENST00000262962 LAG3P18627 525 aa18.27■□□□□ 0.52
CCDC94-201ENST00000262962 POLR2BP30876 1174 aaKnown RBP18.27■□□□□ 0.52
CCDC94-201ENST00000262962 CLCNKBP51801 687 aa18.27■□□□□ 0.52
CCDC94-201ENST00000262962 RBP5P82980 135 aa18.27■□□□□ 0.52
CCDC94-201ENST00000262962 TRPC3Q13507 836 aa18.27■□□□□ 0.52
CCDC94-201ENST00000262962 UPP1Q16831 310 aa18.27■□□□□ 0.52
CCDC94-201ENST00000262962 SPOUT1Q5T280 376 aaKnown RBP18.27■□□□□ 0.52
CCDC94-201ENST00000262962 FBXL13Q8NEE6 735 aa18.27■□□□□ 0.52
CCDC94-201ENST00000262962 CLP1Q92989 425 aaKnown RBP18.27■□□□□ 0.52
CCDC94-201ENST00000262962 COQ4Q9Y3A0 265 aa18.27■□□□□ 0.52
CCDC94-201ENST00000262962 GTPBP10A4D1E9 387 aaKnown RBP18.26■□□□□ 0.51
CCDC94-201ENST00000262962 LCHNA4D1U4 455 aa18.26■□□□□ 0.51
CCDC94-201ENST00000262962 LGALS16A8MUM7 142 aa18.26■□□□□ 0.51
CCDC94-201ENST00000262962 PIRO00625 290 aa18.26■□□□□ 0.51
CCDC94-201ENST00000262962 VNN1O95497 513 aa18.26■□□□□ 0.51
CCDC94-201ENST00000262962 HLA-DRAP01903 254 aa18.26■□□□□ 0.51
CCDC94-201ENST00000262962 ALDH2P05091 517 aa18.26■□□□□ 0.51
CCDC94-201ENST00000262962 GALTP07902 379 aa18.26■□□□□ 0.51
CCDC94-201ENST00000262962 PIK3CAP42336 1068 aa18.26■□□□□ 0.51
CCDC94-201ENST00000262962 OR1G1P47890 313 aa18.26■□□□□ 0.51
CCDC94-201ENST00000262962 SLC11A1P49279 550 aa18.26■□□□□ 0.51
CCDC94-201ENST00000262962 ALDH7A1P49419 539 aaKnown RBP18.26■□□□□ 0.51
CCDC94-201ENST00000262962 BCAR1P56945 870 aa18.26■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms