RNA–Protein interactions for RNA: ENST00000229330.8

HCFC2-201, Transcript of host cell factor C2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HCFC2, Length 5,734 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2-201ENST00000229330 STK32AQ8WU08 396 aa14.54□□□□□ -0.08
HCFC2-201ENST00000229330 DHX38Q92620 1227 aaKnown RBP14.54□□□□□ -0.08
HCFC2-201ENST00000229330 PARVAQ9NVD7 372 aa14.54□□□□□ -0.08
HCFC2-201ENST00000229330 ATP11BQ9Y2G3 1177 aa14.54□□□□□ -0.08
HCFC2-201ENST00000229330 USP17L15C9J2P7 530 aa14.54□□□□□ -0.08
HCFC2-201ENST00000229330 USP17L13C9JLJ4 530 aa14.54□□□□□ -0.08
HCFC2-201ENST00000229330 USP17L11C9JVI0 530 aa14.54□□□□□ -0.08
HCFC2-201ENST00000229330 USP17L18D6R9N7 530 aa14.54□□□□□ -0.08
HCFC2-201ENST00000229330 USP17L22D6RA61 530 aa14.54□□□□□ -0.08
HCFC2-201ENST00000229330 USP17L17D6RBQ6 530 aa14.54□□□□□ -0.08
HCFC2-201ENST00000229330 USP17L19D6RCP7 530 aa14.54□□□□□ -0.08
HCFC2-201ENST00000229330 USP17L20D6RJB6 530 aa14.54□□□□□ -0.08
HCFC2-201ENST00000229330 PRELPP51888 382 aa14.54□□□□□ -0.08
HCFC2-201ENST00000229330 USP17L24Q0WX57 530 aa14.54□□□□□ -0.08
HCFC2-201ENST00000229330 DIP2AQ14689 1571 aa14.54□□□□□ -0.08
HCFC2-201ENST00000229330 USP17L6PQ6QN14 398 aa14.54□□□□□ -0.08
HCFC2-201ENST00000229330 AGAP11Q8TF27 550 aa14.54□□□□□ -0.08
HCFC2-201ENST00000229330 FAM192AQ9GZU8 254 aa14.54□□□□□ -0.08
HCFC2-201ENST00000229330 INPP5FQ9Y2H2 1132 aa14.54□□□□□ -0.08
HCFC2-201ENST00000229330 ABCB11O95342 1321 aa14.54□□□□□ -0.08
HCFC2-201ENST00000229330 GOLGA8CPA6NN73 597 aa14.54□□□□□ -0.08
HCFC2-201ENST00000229330 PIK3R2O00459 728 aa14.54□□□□□ -0.08
HCFC2-201ENST00000229330 OSBPP22059 807 aa14.54□□□□□ -0.08
HCFC2-201ENST00000229330 GNA15P30679 374 aa14.54□□□□□ -0.08
HCFC2-201ENST00000229330 RFC5P40937 340 aa14.54□□□□□ -0.08
HCFC2-201ENST00000229330 TAF12Q16514 161 aa14.54□□□□□ -0.08
HCFC2-201ENST00000229330 SLC13A5Q86YT5 568 aaPredicted RBP14.54□□□□□ -0.08
HCFC2-201ENST00000229330 C18orf8Q96DM3 657 aa14.54□□□□□ -0.08
HCFC2-201ENST00000229330 MASTLQ96GX5 879 aa14.54□□□□□ -0.08
HCFC2-201ENST00000229330 PI4KBQ9UBF8 816 aa14.54□□□□□ -0.08
HCFC2-201ENST00000229330 PCSK1NQ9UHG2 260 aa14.54□□□□□ -0.08
HCFC2-201ENST00000229330 CLPTM1O96005 669 aa14.53□□□□□ -0.08
HCFC2-201ENST00000229330 CENPCQ03188 943 aa14.53□□□□□ -0.08
HCFC2-201ENST00000229330 YWHAHQ04917 246 aaPredicted RBP14.53□□□□□ -0.08
HCFC2-201ENST00000229330 SLC34A1Q06495 639 aa14.53□□□□□ -0.08
HCFC2-201ENST00000229330 INPP5AQ14642 412 aa14.53□□□□□ -0.08
HCFC2-201ENST00000229330 ZNF394Q53GI3 561 aa14.53□□□□□ -0.08
HCFC2-201ENST00000229330 E2F7Q96AV8 911 aa14.53□□□□□ -0.08
HCFC2-201ENST00000229330 C2CD2Q9Y426 696 aa14.53□□□□□ -0.08
HCFC2-201ENST00000229330 TPP2P29144 1249 aaPredicted RBP14.53□□□□□ -0.08
HCFC2-201ENST00000229330 SLFN12LQ6IEE8 588 aa14.53□□□□□ -0.08
HCFC2-201ENST00000229330 TTI2Q6NXR4 508 aa14.53□□□□□ -0.08
HCFC2-201ENST00000229330 MTDHQ86UE4 582 aaKnown RBP14.53□□□□□ -0.08
HCFC2-201ENST00000229330 CREG2Q8IUH2 290 aa14.53□□□□□ -0.08
HCFC2-201ENST00000229330 MSTO1Q9BUK6 570 aa14.53□□□□□ -0.08
HCFC2-201ENST00000229330 CAAP1Q9H8G2 361 aa14.53□□□□□ -0.08
HCFC2-201ENST00000229330 CNOT7Q9UIV1 285 aaKnown RBP14.53□□□□□ -0.08
HCFC2-201ENST00000229330 KIAA1210Q9ULL0 1709 aa14.53□□□□□ -0.08
HCFC2-201ENST00000229330 UTYO14607 1347 aa14.53□□□□□ -0.08
HCFC2-201ENST00000229330 AIM2O14862 343 aa14.53□□□□□ -0.08
HCFC2-201ENST00000229330 SURF1Q15526 300 aa14.53□□□□□ -0.08
HCFC2-201ENST00000229330 TRIM16LQ309B1 348 aa14.53□□□□□ -0.08
HCFC2-201ENST00000229330 C3orf62Q6ZUJ4 267 aa14.53□□□□□ -0.08
HCFC2-201ENST00000229330 ADCK1Q86TW2 530 aa14.53□□□□□ -0.08
HCFC2-201ENST00000229330 RYBPQ8N488 228 aaPredicted RBP14.53□□□□□ -0.08
HCFC2-201ENST00000229330 SH3RF3Q8TEJ3 882 aaPredicted RBP14.53□□□□□ -0.08
HCFC2-201ENST00000229330 HEXIM2Q96MH2 286 aaKnown RBP14.53□□□□□ -0.08
HCFC2-201ENST00000229330 KIAA1586Q9HCI6 787 aa14.53□□□□□ -0.08
HCFC2-201ENST00000229330 NRXN1Q9ULB1 1477 aa14.53□□□□□ -0.08
HCFC2-201ENST00000229330 H0Y626 953 aa14.53□□□□□ -0.08
HCFC2-201ENST00000229330 AKAP10O43572 662 aa14.53□□□□□ -0.08
HCFC2-201ENST00000229330 TRIM16O95361 564 aa14.53□□□□□ -0.08
HCFC2-201ENST00000229330 COPAP53621 1224 aa14.53□□□□□ -0.08
HCFC2-201ENST00000229330 GEMIN4P57678 1058 aaKnown RBP14.53□□□□□ -0.08
HCFC2-201ENST00000229330 DAB2P98082 770 aa14.53□□□□□ -0.08
HCFC2-201ENST00000229330 ADNPQ9H2P0 1102 aa14.53□□□□□ -0.08
HCFC2-201ENST00000229330 TOB1P50616 345 aaPredicted RBP14.53□□□□□ -0.08
HCFC2-201ENST00000229330 DPY19L2Q6NUT2 758 aa14.53□□□□□ -0.08
HCFC2-201ENST00000229330 TMC3Q7Z5M5 1100 aa14.53□□□□□ -0.08
HCFC2-201ENST00000229330 SULF1Q8IWU6 871 aa14.53□□□□□ -0.08
HCFC2-201ENST00000229330 TATDN2Q93075 761 aa14.53□□□□□ -0.08
HCFC2-201ENST00000229330 NCLNQ969V3 563 aa14.53□□□□□ -0.08
HCFC2-201ENST00000229330 TMA16Q96EY4 203 aaKnown RBP14.53□□□□□ -0.08
HCFC2-201ENST00000229330 PACSIN1Q9BY11 444 aa14.53□□□□□ -0.08
HCFC2-201ENST00000229330 ZHX2Q9Y6X8 837 aa14.53□□□□□ -0.08
HCFC2-201ENST00000229330 MYLK4Q86YV6 388 aaPredicted RBP14.52□□□□□ -0.08
HCFC2-201ENST00000229330 CD302Q8IX05 232 aa14.52□□□□□ -0.08
HCFC2-201ENST00000229330 PRCCQ92733 491 aaPredicted RBP14.52□□□□□ -0.08
HCFC2-201ENST00000229330 C16orf96A6NNT2 1141 aa14.52□□□□□ -0.08
HCFC2-201ENST00000229330 LDHAP00338 332 aaKnown RBP14.52□□□□□ -0.08
HCFC2-201ENST00000229330 ADRA2BP18089 450 aa14.52□□□□□ -0.08
HCFC2-201ENST00000229330 SARSP49591 514 aaKnown RBP14.52□□□□□ -0.08
HCFC2-201ENST00000229330 ROR2Q01974 943 aaKnown RBP14.52□□□□□ -0.08
HCFC2-201ENST00000229330 ZBTB41Q5SVQ8 909 aa14.52□□□□□ -0.08
HCFC2-201ENST00000229330 NT5DC1Q5TFE4 455 aa14.52□□□□□ -0.08
HCFC2-201ENST00000229330 SLC30A5Q8TAD4 765 aa14.52□□□□□ -0.08
HCFC2-201ENST00000229330 MPP4Q96JB8 637 aa14.52□□□□□ -0.08
HCFC2-201ENST00000229330 KLHL4Q9C0H6 718 aa14.52□□□□□ -0.08
HCFC2-201ENST00000229330 UBE4BO95155 1302 aa14.52□□□□□ -0.09
HCFC2-201ENST00000229330 PECAM1P16284 738 aaPredicted RBP14.52□□□□□ -0.09
HCFC2-201ENST00000229330 CA8P35219 290 aa14.52□□□□□ -0.09
HCFC2-201ENST00000229330 EIF3EP60228 445 aaKnown RBP14.52□□□□□ -0.09
HCFC2-201ENST00000229330 ERVK-9P63128 1117 aa14.52□□□□□ -0.09
HCFC2-201ENST00000229330 TFDP1Q14186 410 aa14.52□□□□□ -0.09
HCFC2-201ENST00000229330 ZBTB33Q86T24 672 aa14.52□□□□□ -0.09
HCFC2-201ENST00000229330 ARID3BQ8IVW6 561 aaPredicted RBP14.52□□□□□ -0.09
HCFC2-201ENST00000229330 ZSWIM1Q9BR11 485 aa14.52□□□□□ -0.09
HCFC2-201ENST00000229330 CDC42EP4Q9H3Q1 356 aaKnown RBP14.52□□□□□ -0.09
HCFC2-201ENST00000229330 KLHL11Q9NVR0 708 aa14.52□□□□□ -0.09
HCFC2-201ENST00000229330 EXT2Q93063 718 aa14.52□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms