RNA–Protein interactions for RNA: ENST00000223129.8

RPA3-201, Transcript of replication protein A3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPA3, Length 2,020 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3-201ENST00000223129 SAMSN1Q9NSI8 373 aaKnown RBP16.24■□□□□ 0.19
RPA3-201ENST00000223129 INTS13Q9NVM9 706 aa16.24■□□□□ 0.19
RPA3-201ENST00000223129 TRIM49P0CI25 452 aa16.23■□□□□ 0.19
RPA3-201ENST00000223129 TRIM49CP0CI26 452 aa16.23■□□□□ 0.19
RPA3-201ENST00000223129 KRT13P13646 458 aa16.23■□□□□ 0.19
RPA3-201ENST00000223129 ERVK-21P61565 698 aa16.23■□□□□ 0.19
RPA3-201ENST00000223129 CCDC40Q4G0X9 1142 aa16.23■□□□□ 0.19
RPA3-201ENST00000223129 IRF2BP1Q8IU81 584 aa16.23■□□□□ 0.19
RPA3-201ENST00000223129 WDR49Q8IV35 697 aa16.23■□□□□ 0.19
RPA3-201ENST00000223129 BEST2Q8NFU1 509 aa16.23■□□□□ 0.19
RPA3-201ENST00000223129 HASPINQ8TF76 798 aa16.23■□□□□ 0.19
RPA3-201ENST00000223129 BCL7CQ8WUZ0 217 aaPredicted RBP16.23■□□□□ 0.19
RPA3-201ENST00000223129 ARNTL2Q8WYA1 636 aa16.23■□□□□ 0.19
RPA3-201ENST00000223129 TSPAN18Q96SJ8 248 aa16.23■□□□□ 0.19
RPA3-201ENST00000223129 CGRRF1Q99675 332 aa16.23■□□□□ 0.19
RPA3-201ENST00000223129 TMEM175Q9BSA9 504 aa16.23■□□□□ 0.19
RPA3-201ENST00000223129 AAASQ9NRG9 546 aa16.23■□□□□ 0.19
RPA3-201ENST00000223129 DPP3Q9NY33 737 aa16.23■□□□□ 0.19
RPA3-201ENST00000223129 NFE2L3Q9Y4A8 694 aa16.23■□□□□ 0.19
RPA3-201ENST00000223129 PCDHB12Q9Y5F1 795 aa16.23■□□□□ 0.19
RPA3-201ENST00000223129 PPEF2O14830 753 aa16.23■□□□□ 0.19
RPA3-201ENST00000223129 ITGB1P05556 798 aa16.23■□□□□ 0.19
RPA3-201ENST00000223129 TMEM191BP0C7N4 346 aa16.23■□□□□ 0.19
RPA3-201ENST00000223129 CYP3A5P20815 502 aa16.23■□□□□ 0.19
RPA3-201ENST00000223129 UPP1Q16831 310 aa16.23■□□□□ 0.19
RPA3-201ENST00000223129 DUOXA2Q1HG44 320 aa16.23■□□□□ 0.19
RPA3-201ENST00000223129 NT5DC4Q86YG4 428 aa16.23■□□□□ 0.19
RPA3-201ENST00000223129 KLHL23Q8NBE8 558 aa16.23■□□□□ 0.19
RPA3-201ENST00000223129 TMC2Q8TDI7 906 aa16.23■□□□□ 0.19
RPA3-201ENST00000223129 CACTINQ8WUQ7 758 aaKnown RBP16.23■□□□□ 0.19
RPA3-201ENST00000223129 NAT10Q9H0A0 1025 aaKnown RBP16.23■□□□□ 0.19
RPA3-201ENST00000223129 ZNF576Q9H609 170 aa16.23■□□□□ 0.19
RPA3-201ENST00000223129 MMRN2Q9H8L6 949 aa16.23■□□□□ 0.19
RPA3-201ENST00000223129 ARMCX3Q9UH62 379 aaPredicted RBP16.23■□□□□ 0.19
RPA3-201ENST00000223129 PODXLO00592 558 aa16.22■□□□□ 0.19
RPA3-201ENST00000223129 XPOTO43592 962 aaKnown RBP16.22■□□□□ 0.19
RPA3-201ENST00000223129 FGFR1OPO95684 399 aaKnown RBP16.22■□□□□ 0.19
RPA3-201ENST00000223129 ZNF165P49910 485 aa16.22■□□□□ 0.19
RPA3-201ENST00000223129 CLDN10P78369 228 aa16.22■□□□□ 0.19
RPA3-201ENST00000223129 DCAF17Q5H9S7 520 aaPredicted RBP16.22■□□□□ 0.19
RPA3-201ENST00000223129 FRMD5Q7Z6J6 570 aa16.22■□□□□ 0.19
RPA3-201ENST00000223129 AOPEPQ8N6M6 819 aa16.22■□□□□ 0.19
RPA3-201ENST00000223129 C1orf127Q8N9H9 656 aa16.22■□□□□ 0.19
RPA3-201ENST00000223129 C3orf58Q8NDZ4 430 aa16.22■□□□□ 0.19
RPA3-201ENST00000223129 ANKRD36BP1Q96IX9 119 aa16.22■□□□□ 0.19
RPA3-201ENST00000223129 FANCLQ9NW38 375 aa16.22■□□□□ 0.19
RPA3-201ENST00000223129 MARCH5Q9NX47 278 aa16.22■□□□□ 0.19
RPA3-201ENST00000223129 EPOPA6NHQ4 379 aa16.21■□□□□ 0.19
RPA3-201ENST00000223129 RFXAPO00287 272 aa16.21■□□□□ 0.19
RPA3-201ENST00000223129 KIF4AO95239 1232 aa16.21■□□□□ 0.19
RPA3-201ENST00000223129 ITGB3P05106 788 aa16.21■□□□□ 0.19
RPA3-201ENST00000223129 PPP3CAQ08209 521 aa16.21■□□□□ 0.19
RPA3-201ENST00000223129 NCAPHQ15003 741 aa16.21■□□□□ 0.19
RPA3-201ENST00000223129 TCERG1LQ5VWI1 586 aa16.21■□□□□ 0.19
RPA3-201ENST00000223129 LRSAM1Q6UWE0 723 aa16.21■□□□□ 0.19
RPA3-201ENST00000223129 SLC39A11Q8N1S5 342 aa16.21■□□□□ 0.19
RPA3-201ENST00000223129 CNOT6LQ96LI5 555 aaKnown RBP16.21■□□□□ 0.19
RPA3-201ENST00000223129 TTYH1Q9H313 450 aaPredicted RBP16.21■□□□□ 0.19
RPA3-201ENST00000223129 THAP9Q9H5L6 903 aa16.21■□□□□ 0.19
RPA3-201ENST00000223129 ALG13Q9NP73 1137 aaKnown RBP16.21■□□□□ 0.19
RPA3-201ENST00000223129 RWDD3Q9Y3V2 267 aa16.21■□□□□ 0.19
RPA3-201ENST00000223129 FGF18O76093 207 aa16.21■□□□□ 0.18
RPA3-201ENST00000223129 B3GAT3O94766 335 aa16.21■□□□□ 0.18
RPA3-201ENST00000223129 GNA14O95837 355 aa16.21■□□□□ 0.18
RPA3-201ENST00000223129 TNNC2P02585 160 aa16.21■□□□□ 0.18
RPA3-201ENST00000223129 LRPAP1P30533 357 aa16.21■□□□□ 0.18
RPA3-201ENST00000223129 GCLMP48507 274 aa16.21■□□□□ 0.18
RPA3-201ENST00000223129 MYL5Q02045 173 aa16.21■□□□□ 0.18
RPA3-201ENST00000223129 C9orf57Q5W0N0 161 aa16.21■□□□□ 0.18
RPA3-201ENST00000223129 CD300LGQ6UXG3 332 aa16.21■□□□□ 0.18
RPA3-201ENST00000223129 TRAPPC11Q7Z392 1133 aa16.21■□□□□ 0.18
RPA3-201ENST00000223129 DHX40Q8IX18 779 aaKnown RBP16.21■□□□□ 0.18
RPA3-201ENST00000223129 CXorf38Q8TB03 319 aa16.21■□□□□ 0.18
RPA3-201ENST00000223129 IGSF21Q96ID5 467 aa16.21■□□□□ 0.18
RPA3-201ENST00000223129 UROC1Q96N76 676 aa16.21■□□□□ 0.18
RPA3-201ENST00000223129 BPIFA3Q9BQP9 254 aa16.21■□□□□ 0.18
RPA3-201ENST00000223129 COLEC11Q9BWP8 271 aa16.21■□□□□ 0.18
RPA3-201ENST00000223129 METTL14Q9HCE5 456 aaKnown RBP16.21■□□□□ 0.18
RPA3-201ENST00000223129 SPG21Q9NZD8 308 aa16.21■□□□□ 0.18
RPA3-201ENST00000223129 C5orf67F2Z3F1 127 aa16.2■□□□□ 0.18
RPA3-201ENST00000223129 CST3P01034 146 aaPredicted RBP16.2■□□□□ 0.18
RPA3-201ENST00000223129 C4BPAP04003 597 aaKnown RBP16.2■□□□□ 0.18
RPA3-201ENST00000223129 KRT19P08727 400 aa16.2■□□□□ 0.18
RPA3-201ENST00000223129 POLR2BP30876 1174 aaKnown RBP16.2■□□□□ 0.18
RPA3-201ENST00000223129 RPL9P32969 192 aaKnown RBP16.2■□□□□ 0.18
RPA3-201ENST00000223129 MARSP56192 900 aaKnown RBP16.2■□□□□ 0.18
RPA3-201ENST00000223129 MCCD1P59942 119 aaPredicted RBP16.2■□□□□ 0.18
RPA3-201ENST00000223129 DCLRE1AQ6PJP8 1040 aa16.2■□□□□ 0.18
RPA3-201ENST00000223129 FBXO22Q8NEZ5 403 aa16.2■□□□□ 0.18
RPA3-201ENST00000223129 DDX27Q96GQ7 796 aaKnown RBP16.2■□□□□ 0.18
RPA3-201ENST00000223129 FAM161BQ96MY7 647 aa16.2■□□□□ 0.18
RPA3-201ENST00000223129 SAMD11Q96NU1 681 aa16.2■□□□□ 0.18
RPA3-201ENST00000223129 CBX8Q9HC52 389 aa16.2■□□□□ 0.18
RPA3-201ENST00000223129 SIX4Q9UIU6 781 aa16.2■□□□□ 0.18
RPA3-201ENST00000223129 AGAP1Q9UPQ3 857 aa16.2■□□□□ 0.18
RPA3-201ENST00000223129 ANO9A1A5B4 782 aa16.19■□□□□ 0.18
RPA3-201ENST00000223129 PIRO00625 290 aa16.19■□□□□ 0.18
RPA3-201ENST00000223129 IKBKBO14920 756 aa16.19■□□□□ 0.18
RPA3-201ENST00000223129 TADA2AO75478 443 aa16.19■□□□□ 0.18
RPA3-201ENST00000223129 BIRC3Q13489 604 aa16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms