RNA–Protein interactions for RNA: ENST00000035307.6

CHPF2-201, Transcript of chondroitin polymerizing factor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHPF2, Length 3,978 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPF2-201ENST00000035307 GNA15P30679 374 aa12.83□□□□□ -0.36
CHPF2-201ENST00000035307 NME8Q8N427 588 aa12.83□□□□□ -0.36
CHPF2-201ENST00000035307 TATDN2Q93075 761 aa12.83□□□□□ -0.36
CHPF2-201ENST00000035307 MTMR12Q9C0I1 747 aa12.83□□□□□ -0.36
CHPF2-201ENST00000035307 TMEM117Q9H0C3 514 aa12.83□□□□□ -0.36
CHPF2-201ENST00000035307 ALG13Q9NP73 1137 aaKnown RBP12.83□□□□□ -0.36
CHPF2-201ENST00000035307 SAYSD1Q9NPB0 183 aa12.83□□□□□ -0.36
CHPF2-201ENST00000035307 HEY1Q9Y5J3 304 aa12.83□□□□□ -0.36
CHPF2-201ENST00000035307 PLIN4Q96Q06 1357 aa12.83□□□□□ -0.36
CHPF2-201ENST00000035307 GOLGA4Q13439 2230 aaKnown RBP12.83□□□□□ -0.36
CHPF2-201ENST00000035307 CCDC188H7C350 402 aa12.83□□□□□ -0.36
CHPF2-201ENST00000035307 B4GALT5O43286 388 aa12.83□□□□□ -0.36
CHPF2-201ENST00000035307 GRAP2O75791 330 aa12.83□□□□□ -0.36
CHPF2-201ENST00000035307 MMEP08473 750 aa12.83□□□□□ -0.36
CHPF2-201ENST00000035307 CYP3A4P08684 503 aa12.83□□□□□ -0.36
CHPF2-201ENST00000035307 HSD17B4P51659 736 aa12.83□□□□□ -0.36
CHPF2-201ENST00000035307 ZNF699Q32M78 642 aa12.83□□□□□ -0.36
CHPF2-201ENST00000035307 MIIPQ5JXC2 388 aa12.83□□□□□ -0.36
CHPF2-201ENST00000035307 HIBCHQ6NVY1 386 aaPredicted RBP12.83□□□□□ -0.36
CHPF2-201ENST00000035307 METTL7BQ6UX53 244 aa12.83□□□□□ -0.36
CHPF2-201ENST00000035307 ERICH1Q86X53 443 aa12.83□□□□□ -0.36
CHPF2-201ENST00000035307 RIOX2Q8IUF8 465 aa12.83□□□□□ -0.36
CHPF2-201ENST00000035307 CASKIN2Q8WXE0 1202 aa12.83□□□□□ -0.36
CHPF2-201ENST00000035307 BSNDQ8WZ55 320 aa12.83□□□□□ -0.36
CHPF2-201ENST00000035307 FERMT1Q9BQL6 677 aa12.83□□□□□ -0.36
CHPF2-201ENST00000035307 TLR10Q9BXR5 811 aa12.83□□□□□ -0.36
CHPF2-201ENST00000035307 MRPL4Q9BYD3 311 aaKnown RBP12.83□□□□□ -0.36
CHPF2-201ENST00000035307 STK33Q9BYT3 514 aa12.83□□□□□ -0.36
CHPF2-201ENST00000035307 SMCHD1A6NHR9 2005 aa12.83□□□□□ -0.36
CHPF2-201ENST00000035307 PAPPAQ13219 1627 aa12.83□□□□□ -0.36
CHPF2-201ENST00000035307 EXOC1LA0A1B0GW35 172 aa12.82□□□□□ -0.36
CHPF2-201ENST00000035307 UPP2O95045 317 aa12.82□□□□□ -0.36
CHPF2-201ENST00000035307 ATP5DP30049 168 aa12.82□□□□□ -0.36
CHPF2-201ENST00000035307 PHKA2P46019 1235 aa12.82□□□□□ -0.36
CHPF2-201ENST00000035307 TRADDQ15628 312 aa12.82□□□□□ -0.36
CHPF2-201ENST00000035307 CCL14Q16627 93 aa12.82□□□□□ -0.36
CHPF2-201ENST00000035307 AADACL2Q6P093 401 aa12.82□□□□□ -0.36
CHPF2-201ENST00000035307 ARIH2O95376 493 aa12.82□□□□□ -0.36
CHPF2-201ENST00000035307 BPIFB4P59827 614 aa12.82□□□□□ -0.36
CHPF2-201ENST00000035307 HADHQ16836 314 aaKnown RBP12.82□□□□□ -0.36
CHPF2-201ENST00000035307 GPR142Q7Z601 462 aa12.82□□□□□ -0.36
CHPF2-201ENST00000035307 DNAJB3Q8WWF6 145 aa12.82□□□□□ -0.36
CHPF2-201ENST00000035307 MROH8Q9H579 483 aa12.82□□□□□ -0.36
CHPF2-201ENST00000035307 AGAP1Q9UPQ3 857 aa12.82□□□□□ -0.36
CHPF2-201ENST00000035307 CYP3A7-CYP3A51PA0A087WV96 503 aa12.82□□□□□ -0.36
CHPF2-201ENST00000035307 CYP3A7P24462 503 aa12.82□□□□□ -0.36
CHPF2-201ENST00000035307 AKAP5P24588 427 aa12.82□□□□□ -0.36
CHPF2-201ENST00000035307 PSMA2P25787 234 aa12.82□□□□□ -0.36
CHPF2-201ENST00000035307 ATP11AP98196 1134 aa12.82□□□□□ -0.36
CHPF2-201ENST00000035307 SMTNL2Q2TAL5 461 aa12.82□□□□□ -0.36
CHPF2-201ENST00000035307 ZNF449Q6P9G9 518 aa12.82□□□□□ -0.36
CHPF2-201ENST00000035307 MMS22LQ6ZRQ5 1243 aa12.82□□□□□ -0.36
CHPF2-201ENST00000035307 TBC1D1Q86TI0 1168 aaPredicted RBP12.82□□□□□ -0.36
CHPF2-201ENST00000035307 CCDC110Q8TBZ0 833 aa12.82□□□□□ -0.36
CHPF2-201ENST00000035307 HASPINQ8TF76 798 aa12.82□□□□□ -0.36
CHPF2-201ENST00000035307 FAM167AQ96KS9 214 aa12.82□□□□□ -0.36
CHPF2-201ENST00000035307 RNPEPQ9H4A4 650 aa12.82□□□□□ -0.36
CHPF2-201ENST00000035307 GINM1Q9NU53 330 aa12.82□□□□□ -0.36
CHPF2-201ENST00000035307 FAM49BQ9NUQ9 324 aa12.82□□□□□ -0.36
CHPF2-201ENST00000035307 HESX1Q9UBX0 185 aa12.82□□□□□ -0.36
CHPF2-201ENST00000035307 MYH6P13533 1939 aa12.81□□□□□ -0.36
CHPF2-201ENST00000035307 C11orf97A0A1B0GVM6 126 aaPredicted RBP12.81□□□□□ -0.36
CHPF2-201ENST00000035307 GRID2IPA4D2P6 1211 aa12.81□□□□□ -0.36
CHPF2-201ENST00000035307 LRRC10BA6NIK2 292 aa12.81□□□□□ -0.36
CHPF2-201ENST00000035307 H0YCG3 227 aa12.81□□□□□ -0.36
CHPF2-201ENST00000035307 SPAG7O75391 227 aa12.81□□□□□ -0.36
CHPF2-201ENST00000035307 HLA-DRAP01903 254 aa12.81□□□□□ -0.36
CHPF2-201ENST00000035307 CA4P22748 312 aa12.81□□□□□ -0.36
CHPF2-201ENST00000035307 ALDH3A1P30838 453 aa12.81□□□□□ -0.36
CHPF2-201ENST00000035307 RGS7P49802 495 aa12.81□□□□□ -0.36
CHPF2-201ENST00000035307 RNASELQ05823 741 aaKnown RBP12.81□□□□□ -0.36
CHPF2-201ENST00000035307 C4orf19Q8IY42 314 aa12.81□□□□□ -0.36
CHPF2-201ENST00000035307 USP38Q8NB14 1042 aa12.81□□□□□ -0.36
CHPF2-201ENST00000035307 RILPQ96NA2 401 aa12.81□□□□□ -0.36
CHPF2-201ENST00000035307 GOLGA8RI6L899 631 aa12.81□□□□□ -0.36
CHPF2-201ENST00000035307 RAP1GAPP47736 663 aa12.81□□□□□ -0.36
CHPF2-201ENST00000035307 LAMTOR4Q0VGL1 99 aa12.81□□□□□ -0.36
CHPF2-201ENST00000035307 CUL1Q13616 776 aa12.81□□□□□ -0.36
CHPF2-201ENST00000035307 CLUL1Q15846 466 aa12.81□□□□□ -0.36
CHPF2-201ENST00000035307 LONRF1Q17RB8 773 aa12.81□□□□□ -0.36
CHPF2-201ENST00000035307 ZBTB41Q5SVQ8 909 aa12.81□□□□□ -0.36
CHPF2-201ENST00000035307 PPP1R12CQ9BZL4 782 aa12.81□□□□□ -0.36
CHPF2-201ENST00000035307 MIS12Q9H081 205 aa12.81□□□□□ -0.36
CHPF2-201ENST00000035307 SNX9Q9Y5X1 595 aa12.81□□□□□ -0.36
CHPF2-201ENST00000035307 SCN9AQ15858 1988 aa12.81□□□□□ -0.36
CHPF2-201ENST00000035307 GON4LQ3T8J9 2241 aa12.81□□□□□ -0.36
CHPF2-201ENST00000035307 CAPN9O14815 690 aa12.81□□□□□ -0.36
CHPF2-201ENST00000035307 CXCL8P10145 99 aa12.81□□□□□ -0.36
CHPF2-201ENST00000035307 PMS2P54278 862 aa12.81□□□□□ -0.36
CHPF2-201ENST00000035307 PPP3CAQ08209 521 aa12.81□□□□□ -0.36
CHPF2-201ENST00000035307 ZNF667Q5HYK9 610 aa12.81□□□□□ -0.36
CHPF2-201ENST00000035307 ATF7IP2Q5U623 682 aa12.81□□□□□ -0.36
CHPF2-201ENST00000035307 ZC3H18Q86VM9 953 aaKnown RBP12.81□□□□□ -0.36
CHPF2-201ENST00000035307 CCDC33Q8N5R6 958 aa12.81□□□□□ -0.36
CHPF2-201ENST00000035307 KCTD6Q8NC69 237 aa12.81□□□□□ -0.36
CHPF2-201ENST00000035307 CCDC197Q8NCU1 140 aa12.81□□□□□ -0.36
CHPF2-201ENST00000035307 CCNYQ8ND76 341 aa12.81□□□□□ -0.36
CHPF2-201ENST00000035307 TPCN2Q8NHX9 752 aa12.81□□□□□ -0.36
CHPF2-201ENST00000035307 SPATA20Q8TB22 786 aa12.81□□□□□ -0.36
CHPF2-201ENST00000035307 ZNF507Q8TCN5 953 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms