RNA–Protein interactions for RNA: ENST00000642021.1

PHGDH-233, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,794 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-233ENST00000642021 XKR9Q5GH70 373 aa14.77□□□□□ -0.04
PHGDH-233ENST00000642021 TBC1D1Q86TI0 1168 aaPredicted RBP14.77□□□□□ -0.04
PHGDH-233ENST00000642021 FBXL13Q8NEE6 735 aa14.77□□□□□ -0.04
PHGDH-233ENST00000642021 FAM151AQ8WW52 585 aa14.77□□□□□ -0.04
PHGDH-233ENST00000642021 CPA5Q8WXQ8 436 aa14.77□□□□□ -0.04
PHGDH-233ENST00000642021 NT5C1BQ96P26 610 aa14.77□□□□□ -0.04
PHGDH-233ENST00000642021 TAAR1Q96RJ0 339 aa14.77□□□□□ -0.04
PHGDH-233ENST00000642021 SCAF8Q9UPN6 1271 aaKnown RBP14.77□□□□□ -0.04
PHGDH-233ENST00000642021 CETPP11597 493 aa14.77□□□□□ -0.05
PHGDH-233ENST00000642021 KRT5P13647 590 aa14.77□□□□□ -0.05
PHGDH-233ENST00000642021 RRM1P23921 792 aa14.77□□□□□ -0.05
PHGDH-233ENST00000642021 PRUNE1Q86TP1 453 aa14.77□□□□□ -0.05
PHGDH-233ENST00000642021 TAX1BP1Q86VP1 789 aa14.77□□□□□ -0.05
PHGDH-233ENST00000642021 ANKRD42Q8N9B4 389 aa14.77□□□□□ -0.05
PHGDH-233ENST00000642021 RNF217Q8TC41 542 aa14.77□□□□□ -0.05
PHGDH-233ENST00000642021 AKT1S1Q96B36 256 aa14.77□□□□□ -0.05
PHGDH-233ENST00000642021 HEMGNQ9BXL5 484 aa14.77□□□□□ -0.05
PHGDH-233ENST00000642021 STMN4Q9H169 189 aaPredicted RBP14.77□□□□□ -0.05
PHGDH-233ENST00000642021 EPB41L3Q9Y2J2 1087 aaPredicted RBP14.77□□□□□ -0.05
PHGDH-233ENST00000642021 MROH7Q68CQ1 1323 aa14.77□□□□□ -0.05
PHGDH-233ENST00000642021 ZNF646O15015 1829 aaPredicted RBP14.77□□□□□ -0.05
PHGDH-233ENST00000642021 DENND3A2RUS2 1198 aa14.76□□□□□ -0.05
PHGDH-233ENST00000642021 H0YIN7 160 aa14.76□□□□□ -0.05
PHGDH-233ENST00000642021 UBOX5O94941 541 aa14.76□□□□□ -0.05
PHGDH-233ENST00000642021 TTC4O95801 387 aa14.76□□□□□ -0.05
PHGDH-233ENST00000642021 OAS1P00973 400 aaKnown RBP14.76□□□□□ -0.05
PHGDH-233ENST00000642021 UNGP13051 313 aaPredicted RBP14.76□□□□□ -0.05
PHGDH-233ENST00000642021 ITIH2P19823 946 aa14.76□□□□□ -0.05
PHGDH-233ENST00000642021 TNIP1Q15025 636 aa14.76□□□□□ -0.05
PHGDH-233ENST00000642021 SEPT14Q6ZU15 432 aa14.76□□□□□ -0.05
PHGDH-233ENST00000642021 C7orf43Q8WVR3 580 aa14.76□□□□□ -0.05
PHGDH-233ENST00000642021 DYDC1Q8WWB3 177 aa14.76□□□□□ -0.05
PHGDH-233ENST00000642021 TCP11Q8WWU5 503 aa14.76□□□□□ -0.05
PHGDH-233ENST00000642021 VEZTQ9HBM0 779 aa14.76□□□□□ -0.05
PHGDH-233ENST00000642021 TMOD2Q9NZR1 351 aa14.76□□□□□ -0.05
PHGDH-233ENST00000642021 TRPC5Q9UL62 973 aaPredicted RBP14.76□□□□□ -0.05
PHGDH-233ENST00000642021 ATP6V1G2O95670 118 aa14.76□□□□□ -0.05
PHGDH-233ENST00000642021 ADCY1Q08828 1119 aa14.76□□□□□ -0.05
PHGDH-233ENST00000642021 ANO5Q75V66 913 aa14.76□□□□□ -0.05
PHGDH-233ENST00000642021 MAP4K3Q8IVH8 894 aa14.76□□□□□ -0.05
PHGDH-233ENST00000642021 C4orf19Q8IY42 314 aa14.76□□□□□ -0.05
PHGDH-233ENST00000642021 MCOLN2Q8IZK6 566 aa14.76□□□□□ -0.05
PHGDH-233ENST00000642021 CCDC63Q8NA47 563 aa14.76□□□□□ -0.05
PHGDH-233ENST00000642021 SYTL5Q8TDW5 730 aaPredicted RBP14.76□□□□□ -0.05
PHGDH-233ENST00000642021 SERPINB12Q96P63 405 aa14.76□□□□□ -0.05
PHGDH-233ENST00000642021 KCNK9Q9NPC2 374 aa14.76□□□□□ -0.05
PHGDH-233ENST00000642021 HOMER3Q9NSC5 361 aa14.76□□□□□ -0.05
PHGDH-233ENST00000642021 BAIAP2L1Q9UHR4 511 aa14.76□□□□□ -0.05
PHGDH-233ENST00000642021 MCM8Q9UJA3 840 aa14.76□□□□□ -0.05
PHGDH-233ENST00000642021 ZBTB12Q9Y330 459 aaPredicted RBP14.76□□□□□ -0.05
PHGDH-233ENST00000642021 CFHP08603 1231 aa14.75□□□□□ -0.05
PHGDH-233ENST00000642021 CLTAP09496 248 aa14.75□□□□□ -0.05
PHGDH-233ENST00000642021 PCNX4Q63HM2 1172 aa14.75□□□□□ -0.05
PHGDH-233ENST00000642021 LMBRD2Q68DH5 695 aaPredicted RBP14.75□□□□□ -0.05
PHGDH-233ENST00000642021 ANKS1BQ7Z6G8 1248 aa14.75□□□□□ -0.05
PHGDH-233ENST00000642021 GDAP1Q8TB36 358 aa14.75□□□□□ -0.05
PHGDH-233ENST00000642021 DDX27Q96GQ7 796 aaKnown RBP14.75□□□□□ -0.05
PHGDH-233ENST00000642021 MFSD14AQ96MC6 490 aa14.75□□□□□ -0.05
PHGDH-233ENST00000642021 DCLK3Q9C098 648 aa14.75□□□□□ -0.05
PHGDH-233ENST00000642021 CXorf56Q9H5V9 222 aa14.75□□□□□ -0.05
PHGDH-233ENST00000642021 NOD2Q9HC29 1040 aa14.75□□□□□ -0.05
PHGDH-233ENST00000642021 TBK1Q9UHD2 729 aa14.75□□□□□ -0.05
PHGDH-233ENST00000642021 COL2A1P02458 1487 aaPredicted RBP14.75□□□□□ -0.05
PHGDH-233ENST00000642021 MYPNQ86TC9 1320 aa14.75□□□□□ -0.05
PHGDH-233ENST00000642021 RAD17O75943 681 aa14.75□□□□□ -0.05
PHGDH-233ENST00000642021 GSTA1P08263 222 aa14.75□□□□□ -0.05
PHGDH-233ENST00000642021 MYCLP12524 364 aaPredicted RBP14.75□□□□□ -0.05
PHGDH-233ENST00000642021 SNRPFP62306 86 aaKnown RBP14.75□□□□□ -0.05
PHGDH-233ENST00000642021 KCNJ2P63252 427 aa14.75□□□□□ -0.05
PHGDH-233ENST00000642021 NUGGCQ68CJ6 796 aa14.75□□□□□ -0.05
PHGDH-233ENST00000642021 PNMA8AQ86V59 439 aaPredicted RBP14.75□□□□□ -0.05
PHGDH-233ENST00000642021 POMGNT1Q8WZA1 660 aa14.75□□□□□ -0.05
PHGDH-233ENST00000642021 ZNF516Q92618 1163 aa14.75□□□□□ -0.05
PHGDH-233ENST00000642021 SNF8Q96H20 258 aa14.75□□□□□ -0.05
PHGDH-233ENST00000642021 RAVER2Q9HCJ3 691 aaKnown RBP14.75□□□□□ -0.05
PHGDH-233ENST00000642021 NINJ2Q9NZG7 142 aa14.75□□□□□ -0.05
PHGDH-233ENST00000642021 ADGRA3Q8IWK6 1321 aa14.74□□□□□ -0.05
PHGDH-233ENST00000642021 SSTR3P32745 418 aaPredicted RBP14.74□□□□□ -0.05
PHGDH-233ENST00000642021 CYP24A1Q07973 514 aa14.74□□□□□ -0.05
PHGDH-233ENST00000642021 PTK6Q13882 451 aa14.74□□□□□ -0.05
PHGDH-233ENST00000642021 NIPA1Q7RTP0 329 aa14.74□□□□□ -0.05
PHGDH-233ENST00000642021 KRT27Q7Z3Y8 459 aa14.74□□□□□ -0.05
PHGDH-233ENST00000642021 MAGEC3Q8TD91 643 aa14.74□□□□□ -0.05
PHGDH-233ENST00000642021 KIFAP3Q92845 792 aa14.74□□□□□ -0.05
PHGDH-233ENST00000642021 TBC1D31Q96DN5 1066 aa14.74□□□□□ -0.05
PHGDH-233ENST00000642021 FBXL18Q96ME1 805 aa14.74□□□□□ -0.05
PHGDH-233ENST00000642021 IWS1Q96ST2 819 aa14.74□□□□□ -0.05
PHGDH-233ENST00000642021 USP15Q9Y4E8 981 aaPredicted RBP14.74□□□□□ -0.05
PHGDH-233ENST00000642021 TELO2Q9Y4R8 837 aa14.74□□□□□ -0.05
PHGDH-233ENST00000642021 RALAP11233 206 aa14.74□□□□□ -0.05
PHGDH-233ENST00000642021 ADCY8P40145 1251 aa14.74□□□□□ -0.05
PHGDH-233ENST00000642021 PSMC5P62195 406 aa14.74□□□□□ -0.05
PHGDH-233ENST00000642021 RPS6P62753 249 aaKnown RBP14.74□□□□□ -0.05
PHGDH-233ENST00000642021 CCDC50Q8IVM0 306 aa14.74□□□□□ -0.05
PHGDH-233ENST00000642021 NEU2Q9Y3R4 380 aa14.74□□□□□ -0.05
PHGDH-233ENST00000642021 THAP12O43422 761 aa14.73□□□□□ -0.05
PHGDH-233ENST00000642021 BRAFP15056 766 aa14.73□□□□□ -0.05
PHGDH-233ENST00000642021 WNT7BP56706 349 aa14.73□□□□□ -0.05
PHGDH-233ENST00000642021 NCALDP61601 193 aa14.73□□□□□ -0.05
PHGDH-233ENST00000642021 DLGAP5Q15398 846 aa14.73□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms