RNA–Protein interactions for RNA: ENST00000641939.1

PHGDH-231, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 540 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-231ENST00000641939 ZMAT2Q96NC0 199 aaKnown RBP16.41■□□□□ 0.22
PHGDH-231ENST00000641939 APOL5Q9BWW9 433 aa16.41■□□□□ 0.22
PHGDH-231ENST00000641939 TNMDQ9H2S6 317 aa16.41■□□□□ 0.22
PHGDH-231ENST00000641939 MRPL44Q9H9J2 332 aaKnown RBP16.41■□□□□ 0.22
PHGDH-231ENST00000641939 GOLGA2P5Q9HBQ8 144 aa16.41■□□□□ 0.22
PHGDH-231ENST00000641939 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP16.41■□□□□ 0.22
PHGDH-231ENST00000641939 RCOR1Q9UKL0 485 aa16.41■□□□□ 0.22
PHGDH-231ENST00000641939 ZDHHC9Q9Y397 364 aa16.41■□□□□ 0.22
PHGDH-231ENST00000641939 C2orf16Q68DN1 1984 aa16.4■□□□□ 0.22
PHGDH-231ENST00000641939 A0A0B4J269 797 aa16.4■□□□□ 0.22
PHGDH-231ENST00000641939 FRMD3A2A2Y4 597 aa16.4■□□□□ 0.22
PHGDH-231ENST00000641939 OGTO15294 1046 aa16.4■□□□□ 0.22
PHGDH-231ENST00000641939 TEX28O15482 410 aa16.4■□□□□ 0.22
PHGDH-231ENST00000641939 B3GAT3O94766 335 aa16.4■□□□□ 0.22
PHGDH-231ENST00000641939 CXCL8P10145 99 aa16.4■□□□□ 0.22
PHGDH-231ENST00000641939 CREMQ03060 361 aa16.4■□□□□ 0.22
PHGDH-231ENST00000641939 ITIH3Q06033 890 aa16.4■□□□□ 0.22
PHGDH-231ENST00000641939 SOX4Q06945 474 aaPredicted RBP16.4■□□□□ 0.22
PHGDH-231ENST00000641939 HERC4Q5GLZ8 1057 aaPredicted RBP16.4■□□□□ 0.22
PHGDH-231ENST00000641939 FAM171A1Q5VUB5 890 aa16.4■□□□□ 0.22
PHGDH-231ENST00000641939 SLC39A4Q6P5W5 647 aa16.4■□□□□ 0.22
PHGDH-231ENST00000641939 DHX58Q96C10 678 aa16.4■□□□□ 0.22
PHGDH-231ENST00000641939 DDX27Q96GQ7 796 aaKnown RBP16.4■□□□□ 0.22
PHGDH-231ENST00000641939 FBXL18Q96ME1 805 aa16.4■□□□□ 0.22
PHGDH-231ENST00000641939 TTPALQ9BTX7 342 aa16.4■□□□□ 0.22
PHGDH-231ENST00000641939 LRRC27Q9C0I9 530 aa16.4■□□□□ 0.22
PHGDH-231ENST00000641939 ADAM7Q9H2U9 754 aa16.4■□□□□ 0.22
PHGDH-231ENST00000641939 PLEKHA5Q9HAU0 1116 aa16.4■□□□□ 0.22
PHGDH-231ENST00000641939 OLFML3Q9NRN5 406 aa16.4■□□□□ 0.22
PHGDH-231ENST00000641939 PANK4Q9NVE7 773 aa16.4■□□□□ 0.22
PHGDH-231ENST00000641939 KBTBD4Q9NVX7 518 aa16.4■□□□□ 0.22
PHGDH-231ENST00000641939 FAM13BQ9NYF5 915 aa16.4■□□□□ 0.22
PHGDH-231ENST00000641939 TBC1D7Q9P0N9 293 aa16.4■□□□□ 0.22
PHGDH-231ENST00000641939 FNIP2Q9P278 1114 aa16.4■□□□□ 0.22
PHGDH-231ENST00000641939 FAM189A1O60320 539 aa16.39■□□□□ 0.21
PHGDH-231ENST00000641939 PPP1R37O75864 691 aa16.39■□□□□ 0.21
PHGDH-231ENST00000641939 TNFSF9P41273 254 aa16.39■□□□□ 0.21
PHGDH-231ENST00000641939 AMPD3Q01432 767 aa16.39■□□□□ 0.21
PHGDH-231ENST00000641939 CBX2Q14781 532 aaPredicted RBP16.39■□□□□ 0.21
PHGDH-231ENST00000641939 RTP2Q5QGT7 225 aa16.39■□□□□ 0.21
PHGDH-231ENST00000641939 RARS2Q5T160 578 aaKnown RBP16.39■□□□□ 0.21
PHGDH-231ENST00000641939 RESP18Q5W5W9 173 aa16.39■□□□□ 0.21
PHGDH-231ENST00000641939 SLFN12LQ6IEE8 588 aa16.39■□□□□ 0.21
PHGDH-231ENST00000641939 CES5AQ6NT32 575 aa16.39■□□□□ 0.21
PHGDH-231ENST00000641939 CCDC65Q8IXS2 484 aa16.39■□□□□ 0.21
PHGDH-231ENST00000641939 C12orf76Q8N812 135 aaPredicted RBP16.39■□□□□ 0.21
PHGDH-231ENST00000641939 STAMQ92783 540 aa16.39■□□□□ 0.21
PHGDH-231ENST00000641939 MSTO1Q9BUK6 570 aa16.39■□□□□ 0.21
PHGDH-231ENST00000641939 PHF7Q9BWX1 381 aaPredicted RBP16.39■□□□□ 0.21
PHGDH-231ENST00000641939 STRA6Q9BX79 667 aa16.39■□□□□ 0.21
PHGDH-231ENST00000641939 TTC26A0AVF1 554 aa16.38■□□□□ 0.21
PHGDH-231ENST00000641939 SPDYE4A6NLX3 237 aa16.38■□□□□ 0.21
PHGDH-231ENST00000641939 ANKRD63C9JTQ0 380 aa16.38■□□□□ 0.21
PHGDH-231ENST00000641939 PODXLO00592 558 aa16.38■□□□□ 0.21
PHGDH-231ENST00000641939 POLR2DO15514 142 aaKnown RBP16.38■□□□□ 0.21
PHGDH-231ENST00000641939 TRAPPC3O43617 180 aa16.38■□□□□ 0.21
PHGDH-231ENST00000641939 GCNT3O95395 438 aa16.38■□□□□ 0.21
PHGDH-231ENST00000641939 GLUD1P00367 558 aa16.38■□□□□ 0.21
PHGDH-231ENST00000641939 C1RP00736 705 aa16.38■□□□□ 0.21
PHGDH-231ENST00000641939 IGFBP6P24592 240 aaPredicted RBP16.38■□□□□ 0.21
PHGDH-231ENST00000641939 RPL9P32969 192 aaKnown RBP16.38■□□□□ 0.21
PHGDH-231ENST00000641939 KRT85P78386 507 aa16.38■□□□□ 0.21
PHGDH-231ENST00000641939 PPP2R3AQ06190 1150 aa16.38■□□□□ 0.21
PHGDH-231ENST00000641939 PDXDC1Q6P996 788 aa16.38■□□□□ 0.21
PHGDH-231ENST00000641939 CD300LGQ6UXG3 332 aa16.38■□□□□ 0.21
PHGDH-231ENST00000641939 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.38■□□□□ 0.21
PHGDH-231ENST00000641939 CEP57Q86XR8 500 aa16.38■□□□□ 0.21
PHGDH-231ENST00000641939 C3orf58Q8NDZ4 430 aa16.38■□□□□ 0.21
PHGDH-231ENST00000641939 PIK3R5Q8WYR1 880 aa16.38■□□□□ 0.21
PHGDH-231ENST00000641939 C18orf25Q96B23 403 aaPredicted RBP16.38■□□□□ 0.21
PHGDH-231ENST00000641939 ACCSQ96QU6 501 aa16.38■□□□□ 0.21
PHGDH-231ENST00000641939 SFXN1Q9H9B4 322 aa16.38■□□□□ 0.21
PHGDH-231ENST00000641939 RPF1Q9H9Y2 349 aaKnown RBP16.38■□□□□ 0.21
PHGDH-231ENST00000641939 MAGEF1Q9HAY2 307 aa16.38■□□□□ 0.21
PHGDH-231ENST00000641939 EXOC7Q9UPT5 735 aa16.38■□□□□ 0.21
PHGDH-231ENST00000641939 PCDHB13Q9Y5F0 798 aa16.38■□□□□ 0.21
PHGDH-231ENST00000641939 ATP6V1DQ9Y5K8 247 aa16.38■□□□□ 0.21
PHGDH-231ENST00000641939 GTF3C5Q9Y5Q8 519 aaPredicted RBP16.38■□□□□ 0.21
PHGDH-231ENST00000641939 STYXL1Q9Y6J8 313 aa16.38■□□□□ 0.21
PHGDH-231ENST00000641939 MYO10Q9HD67 2058 aa16.38■□□□□ 0.21
PHGDH-231ENST00000641939 LACTBL1A8MY62 500 aa16.37■□□□□ 0.21
PHGDH-231ENST00000641939 TISP43B9A030 160 aa16.37■□□□□ 0.21
PHGDH-231ENST00000641939 RPL17P18621 184 aaKnown RBP16.37■□□□□ 0.21
PHGDH-231ENST00000641939 MTHFRP42898 656 aa16.37■□□□□ 0.21
PHGDH-231ENST00000641939 ALCAMQ13740 583 aa16.37■□□□□ 0.21
PHGDH-231ENST00000641939 ENOX2Q16206 610 aaKnown RBP16.37■□□□□ 0.21
PHGDH-231ENST00000641939 ZBTB41Q5SVQ8 909 aa16.37■□□□□ 0.21
PHGDH-231ENST00000641939 L1TD1Q5T7N2 865 aaKnown RBP16.37■□□□□ 0.21
PHGDH-231ENST00000641939 ADALQ6DHV7 355 aa16.37■□□□□ 0.21
PHGDH-231ENST00000641939 ELMSAN1Q6PJG2 1045 aa16.37■□□□□ 0.21
PHGDH-231ENST00000641939 PRSS55Q6UWB4 352 aaPredicted RBP16.37■□□□□ 0.21
PHGDH-231ENST00000641939 GLYCTKQ8IVS8 523 aa16.37■□□□□ 0.21
PHGDH-231ENST00000641939 LNX1Q8TBB1 728 aaPredicted RBP16.37■□□□□ 0.21
PHGDH-231ENST00000641939 LEO1Q8WVC0 666 aaPredicted RBP16.37■□□□□ 0.21
PHGDH-231ENST00000641939 KHSRPQ92945 711 aaKnown RBP eCLIP16.37■□□□□ 0.21
PHGDH-231ENST00000641939 KIF12Q96FN5 646 aa16.37■□□□□ 0.21
PHGDH-231ENST00000641939 RIPOR3Q96MK2 946 aa16.37■□□□□ 0.21
PHGDH-231ENST00000641939 NECTIN4Q96NY8 510 aa16.37■□□□□ 0.21
PHGDH-231ENST00000641939 PYM1Q9BRP8 204 aaKnown RBP16.37■□□□□ 0.21
PHGDH-231ENST00000641939 TRIM9Q9C026 710 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 72.6 ms