RNA–Protein interactions for RNA: ENST00000641455.1

PHGDH-217, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 312 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-217ENST00000641455 WDR27A2RRH5 827 aa8.71□□□□□ -1.02
PHGDH-217ENST00000641455 EIF4E1BA6NMX2 242 aaKnown RBP8.71□□□□□ -1.02
PHGDH-217ENST00000641455 NRG2O14511 850 aaPredicted RBP8.71□□□□□ -1.02
PHGDH-217ENST00000641455 SGSM2O43147 1006 aa8.71□□□□□ -1.02
PHGDH-217ENST00000641455 ASAP2O43150 1006 aa8.71□□□□□ -1.02
PHGDH-217ENST00000641455 PSMD10O75832 226 aa8.71□□□□□ -1.02
PHGDH-217ENST00000641455 GSPT1P15170 499 aaKnown RBP8.71□□□□□ -1.02
PHGDH-217ENST00000641455 RFC5P40937 340 aa8.71□□□□□ -1.02
PHGDH-217ENST00000641455 RAP1GAPP47736 663 aa8.71□□□□□ -1.02
PHGDH-217ENST00000641455 ARPP19P56211 112 aa8.71□□□□□ -1.02
PHGDH-217ENST00000641455 CREB5Q02930 508 aa8.71□□□□□ -1.02
PHGDH-217ENST00000641455 TFDP1Q14186 410 aa8.71□□□□□ -1.02
PHGDH-217ENST00000641455 PLA2G2CQ5R387 149 aa8.71□□□□□ -1.02
PHGDH-217ENST00000641455 TTC22Q5TAA0 569 aa8.71□□□□□ -1.02
PHGDH-217ENST00000641455 CYP4A22Q5TCH4 519 aa8.71□□□□□ -1.02
PHGDH-217ENST00000641455 C1orf228Q6PIY5 440 aa8.71□□□□□ -1.02
PHGDH-217ENST00000641455 PDZRN4Q6ZMN7 1036 aaPredicted RBP8.71□□□□□ -1.02
PHGDH-217ENST00000641455 FERMT3Q86UX7 667 aa8.71□□□□□ -1.02
PHGDH-217ENST00000641455 ELMOD1Q8N336 334 aa8.71□□□□□ -1.02
PHGDH-217ENST00000641455 ZNF579Q8NAF0 562 aaKnown RBP8.71□□□□□ -1.02
PHGDH-217ENST00000641455 ZSCAN18Q8TBC5 510 aaPredicted RBP8.71□□□□□ -1.02
PHGDH-217ENST00000641455 BICD2Q8TD16 824 aa8.71□□□□□ -1.02
PHGDH-217ENST00000641455 SMARCD2Q92925 531 aa8.71□□□□□ -1.02
PHGDH-217ENST00000641455 MSANTD3Q96H12 275 aa8.71□□□□□ -1.02
PHGDH-217ENST00000641455 TCEANC2Q96MN5 208 aa8.71□□□□□ -1.02
PHGDH-217ENST00000641455 ZMYND12Q9H0C1 365 aa8.71□□□□□ -1.02
PHGDH-217ENST00000641455 SLKQ9H2G2 1235 aaPredicted RBP8.71□□□□□ -1.02
PHGDH-217ENST00000641455 C8orf33Q9H7E9 229 aaPredicted RBP8.71□□□□□ -1.02
PHGDH-217ENST00000641455 AVENQ9NQS1 362 aaPredicted RBP8.71□□□□□ -1.02
PHGDH-217ENST00000641455 MTRRQ9UBK8 725 aa8.71□□□□□ -1.02
PHGDH-217ENST00000641455 HEPACAM2A8MVW5 462 aa8.7□□□□□ -1.02
PHGDH-217ENST00000641455 SPECC1L-ADORA2AF8WAN1 911 aa8.7□□□□□ -1.02
PHGDH-217ENST00000641455 SLC27A2O14975 620 aa8.7□□□□□ -1.02
PHGDH-217ENST00000641455 B4GALT5O43286 388 aa8.7□□□□□ -1.02
PHGDH-217ENST00000641455 HYAL3O43820 417 aaPredicted RBP8.7□□□□□ -1.02
PHGDH-217ENST00000641455 EXTL3O43909 919 aa8.7□□□□□ -1.02
PHGDH-217ENST00000641455 DKC1O60832 514 aaKnown RBP eCLIP8.7□□□□□ -1.02
PHGDH-217ENST00000641455 SEC24BO95487 1268 aa8.7□□□□□ -1.02
PHGDH-217ENST00000641455 MYL4P12829 197 aa8.7□□□□□ -1.02
PHGDH-217ENST00000641455 GJA1P17302 382 aa8.7□□□□□ -1.02
PHGDH-217ENST00000641455 ARF4P18085 180 aaPredicted RBP8.7□□□□□ -1.02
PHGDH-217ENST00000641455 HOXA6P31267 233 aa8.7□□□□□ -1.02
PHGDH-217ENST00000641455 QARSP47897 775 aaKnown RBP8.7□□□□□ -1.02
PHGDH-217ENST00000641455 PTENP60484 403 aa8.7□□□□□ -1.02
PHGDH-217ENST00000641455 AKAP17AQ02040 695 aaKnown RBP8.7□□□□□ -1.02
PHGDH-217ENST00000641455 SPIRE1Q08AE8 756 aa8.7□□□□□ -1.02
PHGDH-217ENST00000641455 PON2Q15165 354 aa8.7□□□□□ -1.02
PHGDH-217ENST00000641455 PCBP1Q15365 356 aaKnown RBP eCLIP8.7□□□□□ -1.02
PHGDH-217ENST00000641455 ELF2Q15723 593 aa8.7□□□□□ -1.02
PHGDH-217ENST00000641455 TMEM132AQ24JP5 1023 aa8.7□□□□□ -1.02
PHGDH-217ENST00000641455 UAP1L1Q3KQV9 507 aa8.7□□□□□ -1.02
PHGDH-217ENST00000641455 XKR9Q5GH70 373 aa8.7□□□□□ -1.02
PHGDH-217ENST00000641455 PRSS36Q5K4E3 855 aa8.7□□□□□ -1.02
PHGDH-217ENST00000641455 IQCEQ6IPM2 695 aa8.7□□□□□ -1.02
PHGDH-217ENST00000641455 SLC27A1Q6PCB7 646 aa8.7□□□□□ -1.02
PHGDH-217ENST00000641455 C19orf48Q6RUI8 117 aa8.7□□□□□ -1.02
PHGDH-217ENST00000641455 RTL10Q7L3V2 364 aa8.7□□□□□ -1.02
PHGDH-217ENST00000641455 MFSD6LQ8IWD5 586 aa8.7□□□□□ -1.02
PHGDH-217ENST00000641455 ZSWIM3Q96MP5 696 aa8.7□□□□□ -1.02
PHGDH-217ENST00000641455 MTRQ99707 1265 aa8.7□□□□□ -1.02
PHGDH-217ENST00000641455 DHX33Q9H6R0 707 aaKnown RBP8.7□□□□□ -1.02
PHGDH-217ENST00000641455 CYP4F11Q9HBI6 524 aa8.7□□□□□ -1.02
PHGDH-217ENST00000641455 BRPF3Q9ULD4 1205 aa8.7□□□□□ -1.02
PHGDH-217ENST00000641455 SLC8A2Q9UPR5 921 aa8.7□□□□□ -1.02
PHGDH-217ENST00000641455 WASF3Q9UPY6 502 aa8.7□□□□□ -1.02
PHGDH-217ENST00000641455 SPEGQ15772 3267 aa8.69□□□□□ -1.02
PHGDH-217ENST00000641455 ZZEF1O43149 2961 aa8.69□□□□□ -1.02
PHGDH-217ENST00000641455 KLF18A0A0U1RQI7 1052 aa8.69□□□□□ -1.02
PHGDH-217ENST00000641455 I3L4J1 428 aa8.69□□□□□ -1.02
PHGDH-217ENST00000641455 TDP2O95551 362 aa8.69□□□□□ -1.02
PHGDH-217ENST00000641455 CAVIN2O95810 425 aa8.69□□□□□ -1.02
PHGDH-217ENST00000641455 PRKCBP05771 671 aa8.69□□□□□ -1.02
PHGDH-217ENST00000641455 THP07101 528 aa8.69□□□□□ -1.02
PHGDH-217ENST00000641455 CEACAM1P13688 526 aa8.69□□□□□ -1.02
PHGDH-217ENST00000641455 FGFR3P22607 806 aa8.69□□□□□ -1.02
PHGDH-217ENST00000641455 TKTP29401 623 aaKnown RBP8.69□□□□□ -1.02
PHGDH-217ENST00000641455 CDC27P30260 824 aa8.69□□□□□ -1.02
PHGDH-217ENST00000641455 CTHP32929 405 aa8.69□□□□□ -1.02
PHGDH-217ENST00000641455 CCR2P41597 374 aa8.69□□□□□ -1.02
PHGDH-217ENST00000641455 USP11P51784 963 aa8.69□□□□□ -1.02
PHGDH-217ENST00000641455 ROR1Q01973 937 aa8.69□□□□□ -1.02
PHGDH-217ENST00000641455 MBTD1Q05BQ5 628 aa8.69□□□□□ -1.02
PHGDH-217ENST00000641455 MXD4Q14582 209 aaPredicted RBP8.69□□□□□ -1.02
PHGDH-217ENST00000641455 SOWAHCQ53LP3 525 aaPredicted RBP8.69□□□□□ -1.02
PHGDH-217ENST00000641455 TXNDC11Q6PKC3 985 aa8.69□□□□□ -1.02
PHGDH-217ENST00000641455 ANKS3Q6ZW76 656 aa8.69□□□□□ -1.02
PHGDH-217ENST00000641455 GPIHBP1Q8IV16 184 aa8.69□□□□□ -1.02
PHGDH-217ENST00000641455 HS6ST3Q8IZP7 471 aa8.69□□□□□ -1.02
PHGDH-217ENST00000641455 DEFB124Q8NES8 71 aa8.69□□□□□ -1.02
PHGDH-217ENST00000641455 CCDC148Q8NFR7 591 aa8.69□□□□□ -1.02
PHGDH-217ENST00000641455 TMEM9BQ9NQ34 198 aa8.69□□□□□ -1.02
PHGDH-217ENST00000641455 PPME1Q9Y570 386 aa8.69□□□□□ -1.02
PHGDH-217ENST00000641455 ZMYM2Q9UBW7 1377 aa8.69□□□□□ -1.02
PHGDH-217ENST00000641455 ASPMQ8IZT6 3477 aa8.68□□□□□ -1.02
PHGDH-217ENST00000641455 ADAMTS20P59510 1910 aa8.68□□□□□ -1.02
PHGDH-217ENST00000641455 LNP1A1A4G5 178 aa8.68□□□□□ -1.02
PHGDH-217ENST00000641455 ARHGEF37A1IGU5 675 aa8.68□□□□□ -1.02
PHGDH-217ENST00000641455 EML1O00423 815 aa8.68□□□□□ -1.02
PHGDH-217ENST00000641455 DPYSL4O14531 572 aa8.68□□□□□ -1.02
PHGDH-217ENST00000641455 CHADO15335 359 aa8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms