RNA–Protein interactions for RNA: ENST00000638536.1

SCN1B-206, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN1B, Length 1,600 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-206ENST00000638536 POMGNT1Q8WZA1 660 aa23.74■■□□□ 1.39
SCN1B-206ENST00000638536 CBWD1Q9BRT8 395 aa23.74■■□□□ 1.39
SCN1B-206ENST00000638536 COLEC11Q9BWP8 271 aa23.74■■□□□ 1.39
SCN1B-206ENST00000638536 TLE6Q9H808 572 aa23.74■■□□□ 1.39
SCN1B-206ENST00000638536 NGRNQ9NPE2 291 aaKnown RBP23.74■■□□□ 1.39
SCN1B-206ENST00000638536 TSHZ2Q9NRE2 1034 aa23.74■■□□□ 1.39
SCN1B-206ENST00000638536 CLDND1Q9NY35 253 aa23.74■■□□□ 1.39
SCN1B-206ENST00000638536 STK4Q13043 487 aa23.73■■□□□ 1.39
SCN1B-206ENST00000638536 ALCAMQ13740 583 aa23.73■■□□□ 1.39
SCN1B-206ENST00000638536 PDE12Q6L8Q7 609 aaKnown RBP23.73■■□□□ 1.39
SCN1B-206ENST00000638536 EP400NLQ6ZTU2 488 aa23.73■■□□□ 1.39
SCN1B-206ENST00000638536 C3orf58Q8NDZ4 430 aa23.73■■□□□ 1.39
SCN1B-206ENST00000638536 PABPC5Q96DU9 382 aaKnown RBP23.73■■□□□ 1.39
SCN1B-206ENST00000638536 ADAM28Q9UKQ2 775 aa23.73■■□□□ 1.39
SCN1B-206ENST00000638536 EXOC7Q9UPT5 735 aa23.73■■□□□ 1.39
SCN1B-206ENST00000638536 NCOR1O75376 2440 aa23.73■■□□□ 1.39
SCN1B-206ENST00000638536 CARNS1A5YM72 827 aa23.73■■□□□ 1.39
SCN1B-206ENST00000638536 NR1I2O75469 434 aa23.73■■□□□ 1.39
SCN1B-206ENST00000638536 GLP2RO95838 553 aa23.73■■□□□ 1.39
SCN1B-206ENST00000638536 KCNA5P22460 613 aa23.73■■□□□ 1.39
SCN1B-206ENST00000638536 CA8P35219 290 aa23.73■■□□□ 1.39
SCN1B-206ENST00000638536 DPYDQ12882 1025 aa23.73■■□□□ 1.39
SCN1B-206ENST00000638536 SMC1AQ14683 1233 aaKnown RBP23.73■■□□□ 1.39
SCN1B-206ENST00000638536 PTPN14Q15678 1187 aa23.73■■□□□ 1.39
SCN1B-206ENST00000638536 SLFN12LQ6IEE8 588 aa23.73■■□□□ 1.39
SCN1B-206ENST00000638536 FUT10Q6P4F1 479 aa23.73■■□□□ 1.39
SCN1B-206ENST00000638536 KIAA0895Q8NCT3 520 aa23.73■■□□□ 1.39
SCN1B-206ENST00000638536 SAAL1Q96ER3 474 aa23.73■■□□□ 1.39
SCN1B-206ENST00000638536 PCIF1Q9H4Z3 704 aa23.73■■□□□ 1.39
SCN1B-206ENST00000638536 TUBGCP4Q9UGJ1 667 aa23.73■■□□□ 1.39
SCN1B-206ENST00000638536 GOLGA6L4A6NEF3 574 aa23.72■■□□□ 1.39
SCN1B-206ENST00000638536 H3BQ06 376 aaPredicted RBP23.72■■□□□ 1.39
SCN1B-206ENST00000638536 LILRB3O75022 631 aa23.72■■□□□ 1.39
SCN1B-206ENST00000638536 TBX10O75333 385 aa23.72■■□□□ 1.39
SCN1B-206ENST00000638536 SOD2P04179 222 aa23.72■■□□□ 1.39
SCN1B-206ENST00000638536 ADRB2P07550 413 aa23.72■■□□□ 1.39
SCN1B-206ENST00000638536 KCNQ1P51787 676 aa23.72■■□□□ 1.39
SCN1B-206ENST00000638536 WNT7BP56706 349 aa23.72■■□□□ 1.39
SCN1B-206ENST00000638536 ADAM15Q13444 863 aa23.72■■□□□ 1.39
SCN1B-206ENST00000638536 DUSP6Q16828 381 aa23.72■■□□□ 1.39
SCN1B-206ENST00000638536 UPP1Q16831 310 aa23.72■■□□□ 1.39
SCN1B-206ENST00000638536 NELFCDQ8IXH7 590 aa23.72■■□□□ 1.39
SCN1B-206ENST00000638536 FAM212AQ96EL1 285 aa23.72■■□□□ 1.39
SCN1B-206ENST00000638536 RPF1Q9H9Y2 349 aaKnown RBP23.72■■□□□ 1.39
SCN1B-206ENST00000638536 COG5Q9UP83 839 aa23.72■■□□□ 1.39
SCN1B-206ENST00000638536 GOLGA8IPA6NC78 632 aa23.71■■□□□ 1.39
SCN1B-206ENST00000638536 GOLGA8JA6NMD2 632 aa23.71■■□□□ 1.39
SCN1B-206ENST00000638536 C2CD2LO14523 706 aa23.71■■□□□ 1.39
SCN1B-206ENST00000638536 EIF3DO15371 548 aaKnown RBP eCLIP23.71■■□□□ 1.39
SCN1B-206ENST00000638536 TADA2AO75478 443 aa23.71■■□□□ 1.39
SCN1B-206ENST00000638536 GUCY2FP51841 1108 aa23.71■■□□□ 1.39
SCN1B-206ENST00000638536 ZBTB6Q15916 424 aa23.71■■□□□ 1.39
SCN1B-206ENST00000638536 HERC2P3Q9BVR0 1158 aa23.71■■□□□ 1.39
SCN1B-206ENST00000638536 TMEM206Q9H813 350 aa23.71■■□□□ 1.39
SCN1B-206ENST00000638536 PLEKHA5Q9HAU0 1116 aa23.71■■□□□ 1.39
SCN1B-206ENST00000638536 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP23.7■■□□□ 1.39
SCN1B-206ENST00000638536 TGFB1I1O43294 461 aa23.7■■□□□ 1.39
SCN1B-206ENST00000638536 RPN1P04843 607 aaKnown RBP23.7■■□□□ 1.39
SCN1B-206ENST00000638536 KCNC3Q14003 757 aa23.7■■□□□ 1.39
SCN1B-206ENST00000638536 EFHBQ8N7U6 833 aa23.7■■□□□ 1.39
SCN1B-206ENST00000638536 FAM213AQ9BRX8 229 aa23.7■■□□□ 1.39
SCN1B-206ENST00000638536 CLEC1BQ9P126 229 aa23.7■■□□□ 1.39
SCN1B-206ENST00000638536 IRAK3Q9Y616 596 aa23.7■■□□□ 1.39
SCN1B-206ENST00000638536 SCN1AP35498 2009 aa23.7■■□□□ 1.38
SCN1B-206ENST00000638536 CUL9Q8IWT3 2517 aa23.7■■□□□ 1.38
SCN1B-206ENST00000638536 I3L4J1 428 aa23.7■■□□□ 1.38
SCN1B-206ENST00000638536 B3GAT3O94766 335 aa23.7■■□□□ 1.38
SCN1B-206ENST00000638536 PPP2R3AQ06190 1150 aa23.7■■□□□ 1.38
SCN1B-206ENST00000638536 POSTNQ15063 836 aa23.7■■□□□ 1.38
SCN1B-206ENST00000638536 KIAA0319Q5VV43 1072 aa23.7■■□□□ 1.38
SCN1B-206ENST00000638536 ATXN2LQ8WWM7 1075 aaKnown RBP23.7■■□□□ 1.38
SCN1B-206ENST00000638536 KIF12Q96FN5 646 aa23.7■■□□□ 1.38
SCN1B-206ENST00000638536 CHST7Q9NS84 486 aa23.7■■□□□ 1.38
SCN1B-206ENST00000638536 EXOC1Q9NV70 894 aa23.7■■□□□ 1.38
SCN1B-206ENST00000638536 BARX2Q9UMQ3 279 aaPredicted RBP23.7■■□□□ 1.38
SCN1B-206ENST00000638536 PLXNA3P51805 1871 aa23.69■■□□□ 1.38
SCN1B-206ENST00000638536 CLASP2O75122 1294 aaKnown RBP23.69■■□□□ 1.38
SCN1B-206ENST00000638536 GARTP22102 1010 aa23.69■■□□□ 1.38
SCN1B-206ENST00000638536 FAM160A1Q05DH4 1040 aa23.69■■□□□ 1.38
SCN1B-206ENST00000638536 PNOCQ13519 176 aa23.69■■□□□ 1.38
SCN1B-206ENST00000638536 KYAT1Q16773 422 aa23.69■■□□□ 1.38
SCN1B-206ENST00000638536 RTP2Q5QGT7 225 aa23.69■■□□□ 1.38
SCN1B-206ENST00000638536 JADE1Q6IE81 842 aa23.69■■□□□ 1.38
SCN1B-206ENST00000638536 LLGL2Q6P1M3 1020 aa23.69■■□□□ 1.38
SCN1B-206ENST00000638536 DCLRE1AQ6PJP8 1040 aa23.69■■□□□ 1.38
SCN1B-206ENST00000638536 STXBP4Q6ZWJ1 553 aa23.69■■□□□ 1.38
SCN1B-206ENST00000638536 ERCC4Q92889 916 aaPredicted RBP23.69■■□□□ 1.38
SCN1B-206ENST00000638536 PPP2R3CQ969Q6 453 aa23.69■■□□□ 1.38
SCN1B-206ENST00000638536 ASB2Q96Q27 587 aa23.69■■□□□ 1.38
SCN1B-206ENST00000638536 SLC38A7Q9NVC3 462 aa23.69■■□□□ 1.38
SCN1B-206ENST00000638536 PODXLO00592 558 aa23.68■■□□□ 1.38
SCN1B-206ENST00000638536 MYL1P05976 194 aa23.68■■□□□ 1.38
SCN1B-206ENST00000638536 NFICP08651 508 aa23.68■■□□□ 1.38
SCN1B-206ENST00000638536 CNPP09543 421 aaKnown RBP23.68■■□□□ 1.38
SCN1B-206ENST00000638536 BRCC3P46736 316 aa23.68■■□□□ 1.38
SCN1B-206ENST00000638536 MRPS5P82675 430 aaKnown RBP23.68■■□□□ 1.38
SCN1B-206ENST00000638536 CLUL1Q15846 466 aa23.68■■□□□ 1.38
SCN1B-206ENST00000638536 GADD45GIP1Q8TAE8 222 aaPredicted RBP23.68■■□□□ 1.38
SCN1B-206ENST00000638536 FAM84AQ96KN4 292 aa23.68■■□□□ 1.38
SCN1B-206ENST00000638536 CLIC2O15247 247 aa23.67■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms