RNA–Protein interactions for RNA: ENST00000637083.1

CLN8-212, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLN8, Length 2,001 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-212ENST00000637083 ATP4AP20648 1035 aa12.97□□□□□ -0.33
CLN8-212ENST00000637083 UBA1P22314 1058 aaKnown RBP12.97□□□□□ -0.33
CLN8-212ENST00000637083 EDNRBP24530 442 aa12.97□□□□□ -0.33
CLN8-212ENST00000637083 GRM1Q13255 1194 aa12.97□□□□□ -0.33
CLN8-212ENST00000637083 DNAJC21Q5F1R6 531 aaKnown RBP12.97□□□□□ -0.33
CLN8-212ENST00000637083 KCTD16Q68DU8 428 aa12.97□□□□□ -0.33
CLN8-212ENST00000637083 MCOLN2Q8IZK6 566 aa12.97□□□□□ -0.33
CLN8-212ENST00000637083 ASAP3Q8TDY4 903 aa12.97□□□□□ -0.33
CLN8-212ENST00000637083 ZNF516Q92618 1163 aa12.97□□□□□ -0.33
CLN8-212ENST00000637083 KRT35Q92764 455 aa12.97□□□□□ -0.33
CLN8-212ENST00000637083 JPH2Q9BR39 696 aaPredicted RBP12.97□□□□□ -0.33
CLN8-212ENST00000637083 NEUROG2Q9H2A3 272 aa12.97□□□□□ -0.33
CLN8-212ENST00000637083 MRPL47Q9HD33 250 aaKnown RBP12.97□□□□□ -0.33
CLN8-212ENST00000637083 LCMT1Q9UIC8 334 aa12.97□□□□□ -0.33
CLN8-212ENST00000637083 SNCAIPQ9Y6H5 919 aa12.97□□□□□ -0.33
CLN8-212ENST00000637083 SSC5DA1L4H1 1573 aa12.97□□□□□ -0.33
CLN8-212ENST00000637083 PASKQ96RG2 1323 aa12.97□□□□□ -0.33
CLN8-212ENST00000637083 A0A0B4J269 797 aa12.96□□□□□ -0.33
CLN8-212ENST00000637083 ATMINO43313 823 aaPredicted RBP12.96□□□□□ -0.33
CLN8-212ENST00000637083 ADCY3O60266 1144 aa12.96□□□□□ -0.33
CLN8-212ENST00000637083 GRIN3BO60391 1043 aa12.96□□□□□ -0.33
CLN8-212ENST00000637083 MAFO75444 373 aaPredicted RBP12.96□□□□□ -0.33
CLN8-212ENST00000637083 FARP2O94887 1054 aaPredicted RBP12.96□□□□□ -0.33
CLN8-212ENST00000637083 IREB2P48200 963 aaKnown RBP12.96□□□□□ -0.33
CLN8-212ENST00000637083 NLRP11P59045 1033 aaKnown RBP12.96□□□□□ -0.33
CLN8-212ENST00000637083 IRX3P78415 501 aaPredicted RBP12.96□□□□□ -0.33
CLN8-212ENST00000637083 CUL2Q13617 745 aa12.96□□□□□ -0.33
CLN8-212ENST00000637083 VGLL4Q14135 290 aa12.96□□□□□ -0.33
CLN8-212ENST00000637083 CCDC137Q6PK04 289 aaKnown RBP12.96□□□□□ -0.33
CLN8-212ENST00000637083 HOOK3Q86VS8 718 aa12.96□□□□□ -0.33
CLN8-212ENST00000637083 NCAPG2Q86XI2 1143 aa12.96□□□□□ -0.33
CLN8-212ENST00000637083 PRELID2Q8N945 189 aa12.96□□□□□ -0.33
CLN8-212ENST00000637083 C12orf50Q8NA57 414 aaPredicted RBP12.96□□□□□ -0.33
CLN8-212ENST00000637083 TRIM51Q9BSJ1 452 aa12.96□□□□□ -0.33
CLN8-212ENST00000637083 PI4K2AQ9BTU6 479 aa12.96□□□□□ -0.33
CLN8-212ENST00000637083 SPATC1LQ9H0A9 340 aa12.96□□□□□ -0.33
CLN8-212ENST00000637083 ERVK-5Q9HDB9 667 aa12.96□□□□□ -0.33
CLN8-212ENST00000637083 RSPH14Q9UHP6 348 aa12.96□□□□□ -0.33
CLN8-212ENST00000637083 FEZ2Q9UHY8 353 aaPredicted RBP12.96□□□□□ -0.33
CLN8-212ENST00000637083 GSTTP1A0A1W2PQM5 241 aa12.96□□□□□ -0.34
CLN8-212ENST00000637083 H0YGN5 161 aa12.96□□□□□ -0.34
CLN8-212ENST00000637083 MYO1FO00160 1098 aa12.96□□□□□ -0.34
CLN8-212ENST00000637083 EBAG9O00559 213 aa12.96□□□□□ -0.34
CLN8-212ENST00000637083 ZEB2O60315 1214 aa12.96□□□□□ -0.34
CLN8-212ENST00000637083 SORBS3O60504 671 aa12.96□□□□□ -0.34
CLN8-212ENST00000637083 DDNO94850 711 aaPredicted RBP12.96□□□□□ -0.34
CLN8-212ENST00000637083 CYP1A1P04798 512 aaPredicted RBP12.96□□□□□ -0.34
CLN8-212ENST00000637083 PTGIRP43119 386 aa12.96□□□□□ -0.34
CLN8-212ENST00000637083 ACOT2P49753 483 aa12.96□□□□□ -0.34
CLN8-212ENST00000637083 CNTN2Q02246 1040 aa12.96□□□□□ -0.34
CLN8-212ENST00000637083 CENPCQ03188 943 aa12.96□□□□□ -0.34
CLN8-212ENST00000637083 IFFO1Q0D2I5 559 aa12.96□□□□□ -0.34
CLN8-212ENST00000637083 SLMAPQ14BN4 828 aa12.96□□□□□ -0.34
CLN8-212ENST00000637083 TARBP2Q15633 366 aaKnown RBP12.96□□□□□ -0.34
CLN8-212ENST00000637083 IER5Q5VY09 327 aa12.96□□□□□ -0.34
CLN8-212ENST00000637083 TDRD10Q5VZ19 366 aaKnown RBP12.96□□□□□ -0.34
CLN8-212ENST00000637083 METTL7BQ6UX53 244 aa12.96□□□□□ -0.34
CLN8-212ENST00000637083 ADAT2Q7Z6V5 191 aaKnown RBP12.96□□□□□ -0.34
CLN8-212ENST00000637083 CCDC105Q8IYK2 499 aa12.96□□□□□ -0.34
CLN8-212ENST00000637083 BCAS4Q8TDM0 211 aa12.96□□□□□ -0.34
CLN8-212ENST00000637083 BBXQ8WY36 941 aaPredicted RBP12.96□□□□□ -0.34
CLN8-212ENST00000637083 DCPSQ96C86 337 aaKnown RBP12.96□□□□□ -0.34
CLN8-212ENST00000637083 TRIM31Q9BZY9 425 aa12.96□□□□□ -0.34
CLN8-212ENST00000637083 ACP6Q9NPH0 428 aa12.96□□□□□ -0.34
CLN8-212ENST00000637083 HOMER3Q9NSC5 361 aa12.96□□□□□ -0.34
CLN8-212ENST00000637083 ANAPC7Q9UJX3 599 aa12.96□□□□□ -0.34
CLN8-212ENST00000637083 NR2E1Q9Y466 385 aa12.96□□□□□ -0.34
CLN8-212ENST00000637083 NFS1Q9Y697 457 aa12.96□□□□□ -0.34
CLN8-212ENST00000637083 SCINQ9Y6U3 715 aa12.96□□□□□ -0.34
CLN8-212ENST00000637083 MYH9P35579 1960 aaKnown RBP12.95□□□□□ -0.34
CLN8-212ENST00000637083 CLDN3O15551 220 aa12.95□□□□□ -0.34
CLN8-212ENST00000637083 PEX10O60683 326 aa12.95□□□□□ -0.34
CLN8-212ENST00000637083 PYGMP11217 842 aa12.95□□□□□ -0.34
CLN8-212ENST00000637083 COILP38432 576 aaPredicted RBP12.95□□□□□ -0.34
CLN8-212ENST00000637083 MXD4Q14582 209 aaPredicted RBP12.95□□□□□ -0.34
CLN8-212ENST00000637083 UAP1Q16222 522 aaPredicted RBP12.95□□□□□ -0.34
CLN8-212ENST00000637083 TREML2Q5T2D2 321 aa12.95□□□□□ -0.34
CLN8-212ENST00000637083 CRELD2Q6UXH1 353 aaPredicted RBP12.95□□□□□ -0.34
CLN8-212ENST00000637083 GADL1Q6ZQY3 521 aa12.95□□□□□ -0.34
CLN8-212ENST00000637083 SYDE1Q6ZW31 735 aaPredicted RBP12.95□□□□□ -0.34
CLN8-212ENST00000637083 SRLQ86TD4 932 aa12.95□□□□□ -0.34
CLN8-212ENST00000637083 SPATS2Q86XZ4 545 aaKnown RBP12.95□□□□□ -0.34
CLN8-212ENST00000637083 ZBTB8OSQ8IWT0 167 aa12.95□□□□□ -0.34
CLN8-212ENST00000637083 SULF1Q8IWU6 871 aa12.95□□□□□ -0.34
CLN8-212ENST00000637083 GADD45GIP1Q8TAE8 222 aaPredicted RBP12.95□□□□□ -0.34
CLN8-212ENST00000637083 ATP8B4Q8TF62 1192 aa12.95□□□□□ -0.34
CLN8-212ENST00000637083 TARS2Q9BW92 718 aaKnown RBP12.95□□□□□ -0.34
CLN8-212ENST00000637083 MRPL4Q9BYD3 311 aaKnown RBP12.95□□□□□ -0.34
CLN8-212ENST00000637083 C2orf40Q9H1Z8 148 aa12.95□□□□□ -0.34
CLN8-212ENST00000637083 LRRC19Q9H756 370 aa12.95□□□□□ -0.34
CLN8-212ENST00000637083 ZDHHC18Q9NUE0 388 aa12.95□□□□□ -0.34
CLN8-212ENST00000637083 PCDHB4Q9Y5E5 795 aa12.95□□□□□ -0.34
CLN8-212ENST00000637083 WDR90Q96KV7 1748 aa12.95□□□□□ -0.34
CLN8-212ENST00000637083 CXCL11O14625 94 aa12.95□□□□□ -0.34
CLN8-212ENST00000637083 FSCN2O14926 492 aa12.95□□□□□ -0.34
CLN8-212ENST00000637083 ECEL1O95672 775 aa12.95□□□□□ -0.34
CLN8-212ENST00000637083 CLTAP09496 248 aa12.95□□□□□ -0.34
CLN8-212ENST00000637083 CETN2P41208 172 aa12.95□□□□□ -0.34
CLN8-212ENST00000637083 MARCKSL1P49006 195 aa12.95□□□□□ -0.34
CLN8-212ENST00000637083 PMS2P54278 862 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms