RNA–Protein interactions for RNA: ENST00000634889.1

CDC42BPB-209, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 3

Gene CDC42BPB, Length 507 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-209ENST00000634889 EXTL3O43909 919 aa16.04■□□□□ 0.16
CDC42BPB-209ENST00000634889 EFEMP2O95967 443 aa16.04■□□□□ 0.16
CDC42BPB-209ENST00000634889 CRELD2Q6UXH1 353 aaPredicted RBP16.04■□□□□ 0.16
CDC42BPB-209ENST00000634889 NELFCDQ8IXH7 590 aa16.04■□□□□ 0.16
CDC42BPB-209ENST00000634889 C12orf56Q8IXR9 622 aa16.04■□□□□ 0.16
CDC42BPB-209ENST00000634889 RNF168Q8IYW5 571 aaPredicted RBP16.04■□□□□ 0.16
CDC42BPB-209ENST00000634889 VPS52Q8N1B4 723 aa16.04■□□□□ 0.16
CDC42BPB-209ENST00000634889 DDX27Q96GQ7 796 aaKnown RBP16.04■□□□□ 0.16
CDC42BPB-209ENST00000634889 FAM213AQ9BRX8 229 aa16.04■□□□□ 0.16
CDC42BPB-209ENST00000634889 GTPBP4Q9BZE4 634 aaKnown RBP16.04■□□□□ 0.16
CDC42BPB-209ENST00000634889 ZBP1Q9H171 429 aa16.04■□□□□ 0.16
CDC42BPB-209ENST00000634889 KIAA1586Q9HCI6 787 aa16.04■□□□□ 0.16
CDC42BPB-209ENST00000634889 ENTPD7Q9NQZ7 604 aa16.04■□□□□ 0.16
CDC42BPB-209ENST00000634889 PRRC2BQ5JSZ5 2229 aaKnown RBP16.03■□□□□ 0.16
CDC42BPB-209ENST00000634889 SF3B1O75533 1304 aaKnown RBP eCLIP16.03■□□□□ 0.16
CDC42BPB-209ENST00000634889 FSD2A1L4K1 749 aa16.03■□□□□ 0.16
CDC42BPB-209ENST00000634889 LACTBL1A8MY62 500 aa16.03■□□□□ 0.16
CDC42BPB-209ENST00000634889 KIF4AO95239 1232 aa16.03■□□□□ 0.16
CDC42BPB-209ENST00000634889 IL18RAPO95256 599 aa16.03■□□□□ 0.16
CDC42BPB-209ENST00000634889 SOD2P04179 222 aa16.03■□□□□ 0.16
CDC42BPB-209ENST00000634889 CTSAP10619 480 aa16.03■□□□□ 0.16
CDC42BPB-209ENST00000634889 CYP3A5P20815 502 aa16.03■□□□□ 0.16
CDC42BPB-209ENST00000634889 RPL9P32969 192 aaKnown RBP16.03■□□□□ 0.16
CDC42BPB-209ENST00000634889 IRS1P35568 1242 aa16.03■□□□□ 0.16
CDC42BPB-209ENST00000634889 ERVFC1P60507 584 aa16.03■□□□□ 0.16
CDC42BPB-209ENST00000634889 SOX4Q06945 474 aaPredicted RBP16.03■□□□□ 0.16
CDC42BPB-209ENST00000634889 SMC1AQ14683 1233 aaKnown RBP16.03■□□□□ 0.16
CDC42BPB-209ENST00000634889 CCDC85BQ15834 202 aaPredicted RBP16.03■□□□□ 0.16
CDC42BPB-209ENST00000634889 ZBTB6Q15916 424 aa16.03■□□□□ 0.16
CDC42BPB-209ENST00000634889 UPP1Q16831 310 aa16.03■□□□□ 0.16
CDC42BPB-209ENST00000634889 TCEAL5Q5H9L2 206 aa16.03■□□□□ 0.16
CDC42BPB-209ENST00000634889 TMC7Q7Z402 723 aa16.03■□□□□ 0.16
CDC42BPB-209ENST00000634889 GPD1LQ8N335 351 aa16.03■□□□□ 0.16
CDC42BPB-209ENST00000634889 MICAL1Q8TDZ2 1067 aa16.03■□□□□ 0.16
CDC42BPB-209ENST00000634889 TMEM174Q8WUU8 243 aa16.03■□□□□ 0.16
CDC42BPB-209ENST00000634889 SMARCE1Q969G3 411 aa16.03■□□□□ 0.16
CDC42BPB-209ENST00000634889 SAAL1Q96ER3 474 aa16.03■□□□□ 0.16
CDC42BPB-209ENST00000634889 KIF12Q96FN5 646 aa16.03■□□□□ 0.16
CDC42BPB-209ENST00000634889 PAAF1Q9BRP4 392 aa16.03■□□□□ 0.16
CDC42BPB-209ENST00000634889 VN1R3Q9BXE9 311 aa16.03■□□□□ 0.16
CDC42BPB-209ENST00000634889 HSPBP1Q9NZL4 362 aa16.03■□□□□ 0.16
CDC42BPB-209ENST00000634889 UBQLN1Q9UMX0 589 aaKnown RBP16.03■□□□□ 0.16
CDC42BPB-209ENST00000634889 C2CD2Q9Y426 696 aa16.03■□□□□ 0.16
CDC42BPB-209ENST00000634889 IRAK3Q9Y616 596 aa16.03■□□□□ 0.16
CDC42BPB-209ENST00000634889 PDXKO00764 312 aa16.02■□□□□ 0.16
CDC42BPB-209ENST00000634889 NCK2O43639 380 aa16.02■□□□□ 0.16
CDC42BPB-209ENST00000634889 TADA2AO75478 443 aa16.02■□□□□ 0.16
CDC42BPB-209ENST00000634889 CLCNKBP51801 687 aa16.02■□□□□ 0.16
CDC42BPB-209ENST00000634889 ELAVL2Q12926 359 aaKnown RBP16.02■□□□□ 0.16
CDC42BPB-209ENST00000634889 DCLRE1AQ6PJP8 1040 aa16.02■□□□□ 0.16
CDC42BPB-209ENST00000634889 NT5DC4Q86YG4 428 aa16.02■□□□□ 0.16
CDC42BPB-209ENST00000634889 BRSK2Q8IWQ3 736 aa16.02■□□□□ 0.16
CDC42BPB-209ENST00000634889 GUF1Q8N442 669 aaKnown RBP16.02■□□□□ 0.16
CDC42BPB-209ENST00000634889 MRPL43Q8N983 215 aaKnown RBP16.02■□□□□ 0.16
CDC42BPB-209ENST00000634889 PPM1EQ8WY54 764 aa16.02■□□□□ 0.16
CDC42BPB-209ENST00000634889 C18orf25Q96B23 403 aaPredicted RBP16.02■□□□□ 0.16
CDC42BPB-209ENST00000634889 FAM212AQ96EL1 285 aa16.02■□□□□ 0.16
CDC42BPB-209ENST00000634889 FBXL18Q96ME1 805 aa16.02■□□□□ 0.16
CDC42BPB-209ENST00000634889 CDCA3Q99618 268 aaPredicted RBP16.02■□□□□ 0.16
CDC42BPB-209ENST00000634889 HERC2P3Q9BVR0 1158 aa16.02■□□□□ 0.16
CDC42BPB-209ENST00000634889 KCTD10Q9H3F6 313 aa16.02■□□□□ 0.16
CDC42BPB-209ENST00000634889 PCIF1Q9H4Z3 704 aa16.02■□□□□ 0.16
CDC42BPB-209ENST00000634889 GOLGA2P5Q9HBQ8 144 aa16.02■□□□□ 0.16
CDC42BPB-209ENST00000634889 RBAKQ9NYW8 714 aaPredicted RBP16.02■□□□□ 0.16
CDC42BPB-209ENST00000634889 CACNG4Q9UBN1 327 aa16.02■□□□□ 0.16
CDC42BPB-209ENST00000634889 SSX2IPQ9Y2D8 614 aa16.02■□□□□ 0.16
CDC42BPB-209ENST00000634889 PCDHA5Q9Y5H7 936 aa16.02■□□□□ 0.16
CDC42BPB-209ENST00000634889 F8W810 466 aa16.01■□□□□ 0.15
CDC42BPB-209ENST00000634889 GOLGA6L22H0YM25 854 aa16.01■□□□□ 0.15
CDC42BPB-209ENST00000634889 PODXLO00592 558 aa16.01■□□□□ 0.15
CDC42BPB-209ENST00000634889 B3GAT3O94766 335 aa16.01■□□□□ 0.15
CDC42BPB-209ENST00000634889 CSPG5O95196 566 aa16.01■□□□□ 0.15
CDC42BPB-209ENST00000634889 LRPAP1P30533 357 aa16.01■□□□□ 0.15
CDC42BPB-209ENST00000634889 COL19A1Q14993 1142 aa16.01■□□□□ 0.15
CDC42BPB-209ENST00000634889 TMEM132DQ14C87 1099 aa16.01■□□□□ 0.15
CDC42BPB-209ENST00000634889 COBLL1Q53SF7 1204 aa16.01■□□□□ 0.15
CDC42BPB-209ENST00000634889 ZNF658Q5TYW1 1059 aaPredicted RBP16.01■□□□□ 0.15
CDC42BPB-209ENST00000634889 PLPP4Q5VZY2 271 aa16.01■□□□□ 0.15
CDC42BPB-209ENST00000634889 JADE1Q6IE81 842 aa16.01■□□□□ 0.15
CDC42BPB-209ENST00000634889 FUT10Q6P4F1 479 aa16.01■□□□□ 0.15
CDC42BPB-209ENST00000634889 GPR65Q8IYL9 337 aa16.01■□□□□ 0.15
CDC42BPB-209ENST00000634889 RABGGTAQ92696 567 aa16.01■□□□□ 0.15
CDC42BPB-209ENST00000634889 TUBGCP4Q9UGJ1 667 aa16.01■□□□□ 0.15
CDC42BPB-209ENST00000634889 GOLGA8IPA6NC78 632 aa16■□□□□ 0.15
CDC42BPB-209ENST00000634889 C2orf71A6NGG8 1288 aa16■□□□□ 0.15
CDC42BPB-209ENST00000634889 ZNF233A6NK53 670 aa16■□□□□ 0.15
CDC42BPB-209ENST00000634889 GOLGA8JA6NMD2 632 aa16■□□□□ 0.15
CDC42BPB-209ENST00000634889 TRAPPC3O43617 180 aa16■□□□□ 0.15
CDC42BPB-209ENST00000634889 URODP06132 367 aa16■□□□□ 0.15
CDC42BPB-209ENST00000634889 NFICP08651 508 aa16■□□□□ 0.15
CDC42BPB-209ENST00000634889 GLUD2P49448 558 aa16■□□□□ 0.15
CDC42BPB-209ENST00000634889 SPAG1Q07617 926 aa16■□□□□ 0.15
CDC42BPB-209ENST00000634889 HYAL1Q12794 435 aa16■□□□□ 0.15
CDC42BPB-209ENST00000634889 MYBPC2Q14324 1141 aa16■□□□□ 0.15
CDC42BPB-209ENST00000634889 SKIV2LQ15477 1246 aaKnown RBP16■□□□□ 0.15
CDC42BPB-209ENST00000634889 SNRNP35Q16560 246 aaKnown RBP16■□□□□ 0.15
CDC42BPB-209ENST00000634889 DUSP6Q16828 381 aa16■□□□□ 0.15
CDC42BPB-209ENST00000634889 USP41Q3LFD5 358 aa16■□□□□ 0.15
CDC42BPB-209ENST00000634889 SPATA1Q5VX52 437 aa16■□□□□ 0.15
CDC42BPB-209ENST00000634889 ADGRD2Q7Z7M1 963 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 1331.1 ms