RNA–Protein interactions for RNA: ENST00000627000.1

CHRNA4-209, Transcript of cholinergic receptor nicotinic alpha 4 subunit, humanhuman

TSL 1 (best)

Gene CHRNA4, Length 2,192 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4-209ENST00000627000 FAM212AQ96EL1 285 aa21.1■□□□□ 0.97
CHRNA4-209ENST00000627000 IQCF3P0C7M6 154 aa21.09■□□□□ 0.97
CHRNA4-209ENST00000627000 MCL1Q07820 350 aa21.09■□□□□ 0.97
CHRNA4-209ENST00000627000 GRB14Q14449 540 aa21.09■□□□□ 0.97
CHRNA4-209ENST00000627000 CASP8Q14790 479 aa21.09■□□□□ 0.97
CHRNA4-209ENST00000627000 EEF1DP3Q658K8 133 aa21.09■□□□□ 0.97
CHRNA4-209ENST00000627000 PPTC7Q8NI37 304 aa21.09■□□□□ 0.97
CHRNA4-209ENST00000627000 MAML3Q96JK9 1138 aa21.09■□□□□ 0.97
CHRNA4-209ENST00000627000 GDAP1L1Q96MZ0 367 aa21.09■□□□□ 0.97
CHRNA4-209ENST00000627000 KRT12Q99456 494 aa21.09■□□□□ 0.97
CHRNA4-209ENST00000627000 FZD8Q9H461 694 aa21.09■□□□□ 0.97
CHRNA4-209ENST00000627000 OGTO15294 1046 aa21.09■□□□□ 0.97
CHRNA4-209ENST00000627000 DDX3YO15523 660 aaKnown RBP21.09■□□□□ 0.97
CHRNA4-209ENST00000627000 PHACTR2O75167 634 aa21.09■□□□□ 0.97
CHRNA4-209ENST00000627000 CSDE1O75534 798 aaKnown RBP21.09■□□□□ 0.97
CHRNA4-209ENST00000627000 TFDP1Q14186 410 aa21.09■□□□□ 0.97
CHRNA4-209ENST00000627000 ZNF467Q7Z7K2 595 aaPredicted RBP21.09■□□□□ 0.97
CHRNA4-209ENST00000627000 CEP120Q8N960 986 aa21.09■□□□□ 0.97
CHRNA4-209ENST00000627000 ACTRT1Q8TDG2 376 aa21.09■□□□□ 0.97
CHRNA4-209ENST00000627000 PARK7Q99497 189 aaKnown RBP21.09■□□□□ 0.97
CHRNA4-209ENST00000627000 PRDM10Q9NQV6 1147 aa21.09■□□□□ 0.97
CHRNA4-209ENST00000627000 TMEM59LQ9UK28 342 aa21.09■□□□□ 0.97
CHRNA4-209ENST00000627000 NUB1Q9Y5A7 615 aa21.09■□□□□ 0.97
CHRNA4-209ENST00000627000 ACKR2O00590 384 aa21.08■□□□□ 0.97
CHRNA4-209ENST00000627000 CLSTN1O94985 981 aa21.08■□□□□ 0.97
CHRNA4-209ENST00000627000 CST3P01034 146 aaPredicted RBP21.08■□□□□ 0.97
CHRNA4-209ENST00000627000 ACO1P21399 889 aaKnown RBP21.08■□□□□ 0.97
CHRNA4-209ENST00000627000 HADHBP55084 474 aaKnown RBP21.08■□□□□ 0.97
CHRNA4-209ENST00000627000 PTENP60484 403 aa21.08■□□□□ 0.97
CHRNA4-209ENST00000627000 MBTD1Q05BQ5 628 aa21.08■□□□□ 0.97
CHRNA4-209ENST00000627000 CUL2Q13617 745 aa21.08■□□□□ 0.97
CHRNA4-209ENST00000627000 THNSL1Q8IYQ7 743 aa21.08■□□□□ 0.97
CHRNA4-209ENST00000627000 NPLOC4Q8TAT6 608 aa21.08■□□□□ 0.97
CHRNA4-209ENST00000627000 C16orf70Q9BSU1 422 aa21.08■□□□□ 0.97
CHRNA4-209ENST00000627000 SELENOOQ9BVL4 669 aa21.08■□□□□ 0.97
CHRNA4-209ENST00000627000 UBXN6Q9BZV1 441 aa21.08■□□□□ 0.97
CHRNA4-209ENST00000627000 PTPRHQ9HD43 1115 aa21.08■□□□□ 0.97
CHRNA4-209ENST00000627000 CPSF3Q9UKF6 684 aaKnown RBP21.08■□□□□ 0.97
CHRNA4-209ENST00000627000 NOC2LQ9Y3T9 749 aaKnown RBP21.08■□□□□ 0.97
CHRNA4-209ENST00000627000 MGAMO43451 1857 aa21.08■□□□□ 0.96
CHRNA4-209ENST00000627000 TMEM110-MUSTN1A8MSY1 372 aa21.07■□□□□ 0.96
CHRNA4-209ENST00000627000 PROZP22891 400 aa21.07■□□□□ 0.96
CHRNA4-209ENST00000627000 OSTNP61366 133 aa21.07■□□□□ 0.96
CHRNA4-209ENST00000627000 NOP14P78316 857 aaKnown RBP21.07■□□□□ 0.96
CHRNA4-209ENST00000627000 NCOA4Q13772 614 aa21.07■□□□□ 0.96
CHRNA4-209ENST00000627000 ZNF484Q5JVG2 852 aa21.07■□□□□ 0.96
CHRNA4-209ENST00000627000 ATF7IP2Q5U623 682 aa21.07■□□□□ 0.96
CHRNA4-209ENST00000627000 DCAF12L1Q5VU92 463 aa21.07■□□□□ 0.96
CHRNA4-209ENST00000627000 TSHZ1Q6ZSZ6 1077 aa21.07■□□□□ 0.96
CHRNA4-209ENST00000627000 AP1M1Q9BXS5 423 aa21.07■□□□□ 0.96
CHRNA4-209ENST00000627000 MTMR12Q9C0I1 747 aa21.07■□□□□ 0.96
CHRNA4-209ENST00000627000 STIM2Q9P246 746 aa21.07■□□□□ 0.96
CHRNA4-209ENST00000627000 ALG6Q9Y672 507 aa21.07■□□□□ 0.96
CHRNA4-209ENST00000627000 CLTAP09496 248 aa21.07■□□□□ 0.96
CHRNA4-209ENST00000627000 SMPD1P17405 629 aa21.07■□□□□ 0.96
CHRNA4-209ENST00000627000 SMC1AQ14683 1233 aaKnown RBP21.07■□□□□ 0.96
CHRNA4-209ENST00000627000 TCEAL1Q15170 157 aa21.07■□□□□ 0.96
CHRNA4-209ENST00000627000 FAM110CQ1W6H9 321 aa21.07■□□□□ 0.96
CHRNA4-209ENST00000627000 ZNF568Q3ZCX4 644 aa21.07■□□□□ 0.96
CHRNA4-209ENST00000627000 CST9Q5W186 159 aa21.07■□□□□ 0.96
CHRNA4-209ENST00000627000 MPZL3Q6UWV2 235 aa21.07■□□□□ 0.96
CHRNA4-209ENST00000627000 PLEKHH3Q7Z736 793 aa21.07■□□□□ 0.96
CHRNA4-209ENST00000627000 KLHL7Q8IXQ5 586 aa21.07■□□□□ 0.96
CHRNA4-209ENST00000627000 ZNF653Q96CK0 615 aa21.07■□□□□ 0.96
CHRNA4-209ENST00000627000 FAM81BQ96LP2 452 aa21.07■□□□□ 0.96
CHRNA4-209ENST00000627000 IFT122Q9HBG6 1241 aa21.07■□□□□ 0.96
CHRNA4-209ENST00000627000 ZSCAN5CA6NGD5 496 aaPredicted RBP21.06■□□□□ 0.96
CHRNA4-209ENST00000627000 GLI1P08151 1106 aa21.06■□□□□ 0.96
CHRNA4-209ENST00000627000 TMEM132AQ24JP5 1023 aa21.06■□□□□ 0.96
CHRNA4-209ENST00000627000 CLEC16AQ2KHT3 1053 aa21.06■□□□□ 0.96
CHRNA4-209ENST00000627000 ACAD10Q6JQN1 1059 aa21.06■□□□□ 0.96
CHRNA4-209ENST00000627000 WDR49Q8IV35 697 aa21.06■□□□□ 0.96
CHRNA4-209ENST00000627000 RASGEF1CQ8N431 466 aa21.06■□□□□ 0.96
CHRNA4-209ENST00000627000 EMID1Q96A84 441 aaPredicted RBP21.06■□□□□ 0.96
CHRNA4-209ENST00000627000 BTBD6Q96KE9 485 aa21.06■□□□□ 0.96
CHRNA4-209ENST00000627000 BUD13Q9BRD0 619 aaKnown RBP eCLIP21.06■□□□□ 0.96
CHRNA4-209ENST00000627000 CPA4Q9UI42 421 aa21.06■□□□□ 0.96
CHRNA4-209ENST00000627000 PGRMC1O00264 195 aaKnown RBP21.06■□□□□ 0.96
CHRNA4-209ENST00000627000 ADCY6O43306 1168 aa21.06■□□□□ 0.96
CHRNA4-209ENST00000627000 TNNT3P45378 269 aaPredicted RBP21.06■□□□□ 0.96
CHRNA4-209ENST00000627000 MESDQ14696 234 aa21.06■□□□□ 0.96
CHRNA4-209ENST00000627000 MAP9Q49MG5 647 aa21.06■□□□□ 0.96
CHRNA4-209ENST00000627000 CPNE8Q86YQ8 564 aa21.06■□□□□ 0.96
CHRNA4-209ENST00000627000 TMEM192Q8IY95 271 aa21.06■□□□□ 0.96
CHRNA4-209ENST00000627000 ZHX1Q9UKY1 873 aaPredicted RBP21.06■□□□□ 0.96
CHRNA4-209ENST00000627000 PCDHB4Q9Y5E5 795 aa21.06■□□□□ 0.96
CHRNA4-209ENST00000627000 PCDHB2Q9Y5E7 798 aa21.06■□□□□ 0.96
CHRNA4-209ENST00000627000 ANK1P16157 1881 aa21.06■□□□□ 0.96
CHRNA4-209ENST00000627000 A0A087WZ62 844 aa21.05■□□□□ 0.96
CHRNA4-209ENST00000627000 ASAP2O43150 1006 aa21.05■□□□□ 0.96
CHRNA4-209ENST00000627000 VTNP04004 478 aa21.05■□□□□ 0.96
CHRNA4-209ENST00000627000 CYP1A2P05177 515 aa21.05■□□□□ 0.96
CHRNA4-209ENST00000627000 CFHP08603 1231 aa21.05■□□□□ 0.96
CHRNA4-209ENST00000627000 SSTR3P32745 418 aaPredicted RBP21.05■□□□□ 0.96
CHRNA4-209ENST00000627000 GLE1Q53GS7 698 aaKnown RBP21.05■□□□□ 0.96
CHRNA4-209ENST00000627000 C11orf63Q6NUN7 778 aa21.05■□□□□ 0.96
CHRNA4-209ENST00000627000 TMEM270Q6UE05 265 aa21.05■□□□□ 0.96
CHRNA4-209ENST00000627000 LINC01465Q8N7H1 131 aa21.05■□□□□ 0.96
CHRNA4-209ENST00000627000 FDXACB1Q9BRP7 624 aaPredicted RBP21.05■□□□□ 0.96
CHRNA4-209ENST00000627000 TINF2Q9BSI4 451 aa21.05■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms