RNA–Protein interactions for RNA: ENST00000625905.1

NELFE-214, Transcript of negative elongation factor complex member E, humanhuman

TSL 5 BASIC

Gene NELFE, Length 111 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-214ENST00000625905 ALKAL1Q6UXT8 129 aa10.03□□□□□ -0.8
NELFE-214ENST00000625905 HS2ST1Q7LGA3 356 aa10.03□□□□□ -0.8
NELFE-214ENST00000625905 RBM23Q86U06 439 aaKnown RBP10.03□□□□□ -0.8
NELFE-214ENST00000625905 CD302Q8IX05 232 aa10.03□□□□□ -0.8
NELFE-214ENST00000625905 KIAA0895Q8NCT3 520 aa10.03□□□□□ -0.8
NELFE-214ENST00000625905 NOC3LQ8WTT2 800 aaKnown RBP10.03□□□□□ -0.8
NELFE-214ENST00000625905 SCFD1Q8WVM8 642 aa10.03□□□□□ -0.8
NELFE-214ENST00000625905 C18orf25Q96B23 403 aaPredicted RBP10.03□□□□□ -0.8
NELFE-214ENST00000625905 PABPC5Q96DU9 382 aaKnown RBP10.03□□□□□ -0.8
NELFE-214ENST00000625905 FAM212AQ96EL1 285 aa10.03□□□□□ -0.8
NELFE-214ENST00000625905 SAAL1Q96ER3 474 aa10.03□□□□□ -0.8
NELFE-214ENST00000625905 KIF12Q96FN5 646 aa10.03□□□□□ -0.8
NELFE-214ENST00000625905 DDX27Q96GQ7 796 aaKnown RBP10.03□□□□□ -0.8
NELFE-214ENST00000625905 ZMAT2Q96NC0 199 aaKnown RBP10.03□□□□□ -0.8
NELFE-214ENST00000625905 IPO9Q96P70 1041 aaKnown RBP10.03□□□□□ -0.8
NELFE-214ENST00000625905 CDCA3Q99618 268 aaPredicted RBP10.03□□□□□ -0.8
NELFE-214ENST00000625905 PAAF1Q9BRP4 392 aa10.03□□□□□ -0.8
NELFE-214ENST00000625905 CBWD1Q9BRT8 395 aa10.03□□□□□ -0.8
NELFE-214ENST00000625905 FAM213AQ9BRX8 229 aa10.03□□□□□ -0.8
NELFE-214ENST00000625905 IGFLR1Q9H665 355 aa10.03□□□□□ -0.8
NELFE-214ENST00000625905 TLE6Q9H808 572 aa10.03□□□□□ -0.8
NELFE-214ENST00000625905 UBE2ZQ9H832 354 aaPredicted RBP10.03□□□□□ -0.8
NELFE-214ENST00000625905 TSHZ2Q9NRE2 1034 aa10.03□□□□□ -0.8
NELFE-214ENST00000625905 CLDND1Q9NY35 253 aa10.03□□□□□ -0.8
NELFE-214ENST00000625905 TUBGCP4Q9UGJ1 667 aa10.03□□□□□ -0.8
NELFE-214ENST00000625905 HOOK1Q9UJC3 728 aaKnown RBP10.03□□□□□ -0.8
NELFE-214ENST00000625905 MYO7AQ13402 2215 aa10.03□□□□□ -0.8
NELFE-214ENST00000625905 TRIP11Q15643 1979 aa10.03□□□□□ -0.8
NELFE-214ENST00000625905 C2orf71A6NGG8 1288 aa10.02□□□□□ -0.81
NELFE-214ENST00000625905 HIDE1A8MVS5 230 aa10.02□□□□□ -0.81
NELFE-214ENST00000625905 LACTBL1A8MY62 500 aa10.02□□□□□ -0.81
NELFE-214ENST00000625905 TMEM189-UBE2V1I3L0A0 370 aa10.02□□□□□ -0.81
NELFE-214ENST00000625905 TULP1O00294 542 aaPredicted RBP10.02□□□□□ -0.81
NELFE-214ENST00000625905 PODXLO00592 558 aa10.02□□□□□ -0.81
NELFE-214ENST00000625905 KIAA0391O15091 583 aaKnown RBP10.02□□□□□ -0.81
NELFE-214ENST00000625905 EXTL3O43909 919 aa10.02□□□□□ -0.81
NELFE-214ENST00000625905 B3GAT3O94766 335 aa10.02□□□□□ -0.81
NELFE-214ENST00000625905 LDHAP00338 332 aaKnown RBP10.02□□□□□ -0.81
NELFE-214ENST00000625905 NFICP08651 508 aa10.02□□□□□ -0.81
NELFE-214ENST00000625905 SRGAP2BP0DMP2 458 aa10.02□□□□□ -0.81
NELFE-214ENST00000625905 KCNA5P22460 613 aa10.02□□□□□ -0.81
NELFE-214ENST00000625905 GTF2F1P35269 517 aaKnown RBP eCLIP10.02□□□□□ -0.81
NELFE-214ENST00000625905 NDUFV1P49821 464 aa10.02□□□□□ -0.81
NELFE-214ENST00000625905 CLCNKBP51801 687 aa10.02□□□□□ -0.81
NELFE-214ENST00000625905 SOX4Q06945 474 aaPredicted RBP10.02□□□□□ -0.81
NELFE-214ENST00000625905 SPAG1Q07617 926 aa10.02□□□□□ -0.81
NELFE-214ENST00000625905 ELAVL2Q12926 359 aaKnown RBP10.02□□□□□ -0.81
NELFE-214ENST00000625905 PSMD2Q13200 908 aa10.02□□□□□ -0.81
NELFE-214ENST00000625905 SNW1Q13573 536 aaKnown RBP10.02□□□□□ -0.81
NELFE-214ENST00000625905 COL19A1Q14993 1142 aa10.02□□□□□ -0.81
NELFE-214ENST00000625905 TMEM132DQ14C87 1099 aa10.02□□□□□ -0.81
NELFE-214ENST00000625905 DUSP6Q16828 381 aa10.02□□□□□ -0.81
NELFE-214ENST00000625905 UPP1Q16831 310 aa10.02□□□□□ -0.81
NELFE-214ENST00000625905 AAK1Q2M2I8 961 aa10.02□□□□□ -0.81
NELFE-214ENST00000625905 KIAA1841Q6NSI8 718 aa10.02□□□□□ -0.81
NELFE-214ENST00000625905 BRSK2Q8IWQ3 736 aa10.02□□□□□ -0.81
NELFE-214ENST00000625905 RNF168Q8IYW5 571 aaPredicted RBP10.02□□□□□ -0.81
NELFE-214ENST00000625905 EFHBQ8N7U6 833 aa10.02□□□□□ -0.81
NELFE-214ENST00000625905 MRPL43Q8N983 215 aaKnown RBP10.02□□□□□ -0.81
NELFE-214ENST00000625905 ENGASEQ8NFI3 743 aa10.02□□□□□ -0.81
NELFE-214ENST00000625905 GOLGA5Q8TBA6 731 aa10.02□□□□□ -0.81
NELFE-214ENST00000625905 ZNF507Q8TCN5 953 aa10.02□□□□□ -0.81
NELFE-214ENST00000625905 AUTS2Q8WXX7 1259 aa10.02□□□□□ -0.81
NELFE-214ENST00000625905 TSPAN18Q96SJ8 248 aa10.02□□□□□ -0.81
NELFE-214ENST00000625905 EMILIN2Q9BXX0 1053 aa10.02□□□□□ -0.81
NELFE-214ENST00000625905 MRPL17Q9NRX2 175 aaKnown RBP10.02□□□□□ -0.81
NELFE-214ENST00000625905 AGPAT3Q9NRZ7 376 aa10.02□□□□□ -0.81
NELFE-214ENST00000625905 RMND1Q9NWS8 449 aa10.02□□□□□ -0.81
NELFE-214ENST00000625905 RBAKQ9NYW8 714 aaPredicted RBP10.02□□□□□ -0.81
NELFE-214ENST00000625905 UBQLN1Q9UMX0 589 aaKnown RBP10.02□□□□□ -0.81
NELFE-214ENST00000625905 SSX2IPQ9Y2D8 614 aa10.02□□□□□ -0.81
NELFE-214ENST00000625905 GOLGA8IPA6NC78 632 aa10.01□□□□□ -0.81
NELFE-214ENST00000625905 GOLGA8JA6NMD2 632 aa10.01□□□□□ -0.81
NELFE-214ENST00000625905 C2CD2LO14523 706 aa10.01□□□□□ -0.81
NELFE-214ENST00000625905 PER2O15055 1255 aa10.01□□□□□ -0.81
NELFE-214ENST00000625905 LINC01565O15544 149 aa10.01□□□□□ -0.81
NELFE-214ENST00000625905 GADD45BO75293 160 aaPredicted RBP10.01□□□□□ -0.81
NELFE-214ENST00000625905 TBX10O75333 385 aa10.01□□□□□ -0.81
NELFE-214ENST00000625905 RHOBTB3O94955 611 aa10.01□□□□□ -0.81
NELFE-214ENST00000625905 KIF20AO95235 890 aa10.01□□□□□ -0.81
NELFE-214ENST00000625905 IL18RAPO95256 599 aa10.01□□□□□ -0.81
NELFE-214ENST00000625905 SMC2O95347 1197 aa10.01□□□□□ -0.81
NELFE-214ENST00000625905 CXCL14O95715 111 aa10.01□□□□□ -0.81
NELFE-214ENST00000625905 RPL9P32969 192 aaKnown RBP10.01□□□□□ -0.81
NELFE-214ENST00000625905 HOXD13P35453 343 aa10.01□□□□□ -0.81
NELFE-214ENST00000625905 UBE2HP62256 183 aa10.01□□□□□ -0.81
NELFE-214ENST00000625905 SNRPFP62306 86 aaKnown RBP10.01□□□□□ -0.81
NELFE-214ENST00000625905 POU5F1Q01860 360 aaKnown RBP10.01□□□□□ -0.81
NELFE-214ENST00000625905 CREMQ03060 361 aa10.01□□□□□ -0.81
NELFE-214ENST00000625905 TFF2Q03403 129 aa10.01□□□□□ -0.81
NELFE-214ENST00000625905 STK4Q13043 487 aa10.01□□□□□ -0.81
NELFE-214ENST00000625905 PNOCQ13519 176 aa10.01□□□□□ -0.81
NELFE-214ENST00000625905 KCNB1Q14721 858 aa10.01□□□□□ -0.81
NELFE-214ENST00000625905 KNOP1Q1ED39 458 aaKnown RBP10.01□□□□□ -0.81
NELFE-214ENST00000625905 USP41Q3LFD5 358 aa10.01□□□□□ -0.81
NELFE-214ENST00000625905 JADE1Q6IE81 842 aa10.01□□□□□ -0.81
NELFE-214ENST00000625905 DCLRE1AQ6PJP8 1040 aa10.01□□□□□ -0.81
NELFE-214ENST00000625905 GPD1LQ8N335 351 aa10.01□□□□□ -0.81
NELFE-214ENST00000625905 BEST2Q8NFU1 509 aa10.01□□□□□ -0.81
NELFE-214ENST00000625905 ATXN2LQ8WWM7 1075 aaKnown RBP10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms