RNA–Protein interactions for RNA: ENST00000618217.4

CBWD3-213, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene CBWD3, Length 1,611 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-213ENST00000618217 C1orf220Q5T0J3 134 aa24.59■■□□□ 1.53
CBWD3-213ENST00000618217 ZNF280BQ86YH2 543 aa24.59■■□□□ 1.53
CBWD3-213ENST00000618217 TMC2Q8TDI7 906 aa24.59■■□□□ 1.53
CBWD3-213ENST00000618217 MRPL9Q9BYD2 267 aaKnown RBP24.59■■□□□ 1.53
CBWD3-213ENST00000618217 THAP9Q9H5L6 903 aa24.59■■□□□ 1.53
CBWD3-213ENST00000618217 CWH43Q9H720 699 aa24.59■■□□□ 1.53
CBWD3-213ENST00000618217 C2CD2Q9Y426 696 aa24.59■■□□□ 1.53
CBWD3-213ENST00000618217 NFE2L3Q9Y4A8 694 aa24.59■■□□□ 1.53
CBWD3-213ENST00000618217 KIAA1671Q9BY89 1806 aa24.58■■□□□ 1.53
CBWD3-213ENST00000618217 PTPRJQ12913 1337 aa24.58■■□□□ 1.53
CBWD3-213ENST00000618217 DDHD2O94830 711 aa24.58■■□□□ 1.53
CBWD3-213ENST00000618217 FGFR1OPO95684 399 aaKnown RBP24.58■■□□□ 1.53
CBWD3-213ENST00000618217 CAVIN2O95810 425 aa24.58■■□□□ 1.53
CBWD3-213ENST00000618217 EPB41P11171 864 aaKnown RBP24.58■■□□□ 1.53
CBWD3-213ENST00000618217 MARSP56192 900 aaKnown RBP24.58■■□□□ 1.53
CBWD3-213ENST00000618217 MYL5Q02045 173 aa24.58■■□□□ 1.53
CBWD3-213ENST00000618217 ENPEPQ07075 957 aa24.58■■□□□ 1.53
CBWD3-213ENST00000618217 BTG3Q14201 252 aaPredicted RBP24.58■■□□□ 1.53
CBWD3-213ENST00000618217 IQCB1Q15051 598 aa24.58■■□□□ 1.53
CBWD3-213ENST00000618217 SURF1Q15526 300 aa24.58■■□□□ 1.53
CBWD3-213ENST00000618217 INTS8Q75QN2 995 aaKnown RBP24.58■■□□□ 1.53
CBWD3-213ENST00000618217 FRMD5Q7Z6J6 570 aa24.58■■□□□ 1.53
CBWD3-213ENST00000618217 DHX40Q8IX18 779 aaKnown RBP24.58■■□□□ 1.53
CBWD3-213ENST00000618217 LRRC43Q8N309 656 aa24.58■■□□□ 1.53
CBWD3-213ENST00000618217 CCDC127Q96BQ5 260 aa24.58■■□□□ 1.53
CBWD3-213ENST00000618217 HSD3B7Q9H2F3 369 aa24.58■■□□□ 1.53
CBWD3-213ENST00000618217 MRPL42Q9Y6G3 142 aaKnown RBP24.58■■□□□ 1.53
CBWD3-213ENST00000618217 IKBKBO14920 756 aa24.57■■□□□ 1.52
CBWD3-213ENST00000618217 PBX2P40425 430 aa24.57■■□□□ 1.52
CBWD3-213ENST00000618217 DLG4P78352 724 aa24.57■■□□□ 1.52
CBWD3-213ENST00000618217 SOX4Q06945 474 aaPredicted RBP24.57■■□□□ 1.52
CBWD3-213ENST00000618217 C18orf25Q96B23 403 aaPredicted RBP24.57■■□□□ 1.52
CBWD3-213ENST00000618217 KIF12Q96FN5 646 aa24.57■■□□□ 1.52
CBWD3-213ENST00000618217 POP1Q99575 1024 aaKnown RBP24.57■■□□□ 1.52
CBWD3-213ENST00000618217 PBX4Q9BYU1 374 aa24.57■■□□□ 1.52
CBWD3-213ENST00000618217 NRDE2Q9H7Z3 1164 aa24.57■■□□□ 1.52
CBWD3-213ENST00000618217 SAMSN1Q9NSI8 373 aaKnown RBP24.57■■□□□ 1.52
CBWD3-213ENST00000618217 YBX2Q9Y2T7 364 aaKnown RBP24.57■■□□□ 1.52
CBWD3-213ENST00000618217 GNA14O95837 355 aa24.57■■□□□ 1.52
CBWD3-213ENST00000618217 BFSP1Q12934 665 aa24.57■■□□□ 1.52
CBWD3-213ENST00000618217 TMEM132DQ14C87 1099 aa24.57■■□□□ 1.52
CBWD3-213ENST00000618217 NT5DC4Q86YG4 428 aa24.57■■□□□ 1.52
CBWD3-213ENST00000618217 COLGALT2Q8IYK4 626 aa24.57■■□□□ 1.52
CBWD3-213ENST00000618217 AOPEPQ8N6M6 819 aa24.57■■□□□ 1.52
CBWD3-213ENST00000618217 ZNF516Q92618 1163 aa24.57■■□□□ 1.52
CBWD3-213ENST00000618217 FAM84AQ96KN4 292 aa24.57■■□□□ 1.52
CBWD3-213ENST00000618217 ARMCX3Q9UH62 379 aaPredicted RBP24.57■■□□□ 1.52
CBWD3-213ENST00000618217 CHD9Q3L8U1 2897 aa24.57■■□□□ 1.52
CBWD3-213ENST00000618217 LRRIQ3A6PVS8 624 aaPredicted RBP24.56■■□□□ 1.52
CBWD3-213ENST00000618217 ARHGEF15O94989 841 aa24.56■■□□□ 1.52
CBWD3-213ENST00000618217 VAMP7P51809 220 aa24.56■■□□□ 1.52
CBWD3-213ENST00000618217 TPD52L1Q16890 204 aaPredicted RBP24.56■■□□□ 1.52
CBWD3-213ENST00000618217 LRIT3Q3SXY7 679 aa24.56■■□□□ 1.52
CBWD3-213ENST00000618217 CDKAL1Q5VV42 579 aa24.56■■□□□ 1.52
CBWD3-213ENST00000618217 TMEM130Q8N3G9 435 aa24.56■■□□□ 1.52
CBWD3-213ENST00000618217 CLP1Q92989 425 aaKnown RBP24.56■■□□□ 1.52
CBWD3-213ENST00000618217 CGRRF1Q99675 332 aa24.56■■□□□ 1.52
CBWD3-213ENST00000618217 TSPY26PQ9H489 355 aa24.56■■□□□ 1.52
CBWD3-213ENST00000618217 CBX8Q9HC52 389 aa24.56■■□□□ 1.52
CBWD3-213ENST00000618217 METTL14Q9HCE5 456 aaKnown RBP24.56■■□□□ 1.52
CBWD3-213ENST00000618217 SLC38A7Q9NVC3 462 aa24.56■■□□□ 1.52
CBWD3-213ENST00000618217 INTS13Q9NVM9 706 aa24.56■■□□□ 1.52
CBWD3-213ENST00000618217 FANCLQ9NW38 375 aa24.56■■□□□ 1.52
CBWD3-213ENST00000618217 DNAJB4Q9UDY4 337 aa24.56■■□□□ 1.52
CBWD3-213ENST00000618217 DLATP10515 647 aaKnown RBP24.55■■□□□ 1.52
CBWD3-213ENST00000618217 SMAD3P84022 425 aaKnown RBP24.55■■□□□ 1.52
CBWD3-213ENST00000618217 RNASELQ05823 741 aaKnown RBP24.55■■□□□ 1.52
CBWD3-213ENST00000618217 TUSC3Q13454 348 aa24.55■■□□□ 1.52
CBWD3-213ENST00000618217 WDR49Q8IV35 697 aa24.55■■□□□ 1.52
CBWD3-213ENST00000618217 OR5B17Q8NGF7 314 aa24.55■■□□□ 1.52
CBWD3-213ENST00000618217 FNBP1Q96RU3 617 aa24.55■■□□□ 1.52
CBWD3-213ENST00000618217 TUBGCP4Q9UGJ1 667 aa24.55■■□□□ 1.52
CBWD3-213ENST00000618217 UBQLN1Q9UMX0 589 aaKnown RBP24.55■■□□□ 1.52
CBWD3-213ENST00000618217 LINC01553A4QN01 128 aa24.54■■□□□ 1.52
CBWD3-213ENST00000618217 KRT13P13646 458 aa24.54■■□□□ 1.52
CBWD3-213ENST00000618217 CYP3A5P20815 502 aa24.54■■□□□ 1.52
CBWD3-213ENST00000618217 LMBRD2Q68DH5 695 aaPredicted RBP24.54■■□□□ 1.52
CBWD3-213ENST00000618217 NLRC5Q86WI3 1866 aa24.54■■□□□ 1.52
CBWD3-213ENST00000618217 TRIM59Q8IWR1 403 aa24.54■■□□□ 1.52
CBWD3-213ENST00000618217 FIBCD1Q8N539 461 aa24.54■■□□□ 1.52
CBWD3-213ENST00000618217 CNOT6LQ96LI5 555 aaKnown RBP24.54■■□□□ 1.52
CBWD3-213ENST00000618217 GOLGA2P5Q9HBQ8 144 aa24.54■■□□□ 1.52
CBWD3-213ENST00000618217 CA3P07451 260 aa24.53■■□□□ 1.52
CBWD3-213ENST00000618217 GUCY2FP51841 1108 aa24.53■■□□□ 1.52
CBWD3-213ENST00000618217 TFAMQ00059 246 aaKnown RBP24.53■■□□□ 1.52
CBWD3-213ENST00000618217 RAB30Q15771 203 aa24.53■■□□□ 1.52
CBWD3-213ENST00000618217 CCDC40Q4G0X9 1142 aa24.53■■□□□ 1.52
CBWD3-213ENST00000618217 CXorf38Q8TB03 319 aa24.53■■□□□ 1.52
CBWD3-213ENST00000618217 SLC35C1Q96A29 364 aa24.53■■□□□ 1.52
CBWD3-213ENST00000618217 CACNG4Q9UBN1 327 aa24.53■■□□□ 1.52
CBWD3-213ENST00000618217 TRIM49P0CI25 452 aa24.53■■□□□ 1.52
CBWD3-213ENST00000618217 TRIM49CP0CI26 452 aa24.53■■□□□ 1.52
CBWD3-213ENST00000618217 ZNF18P17022 549 aa24.53■■□□□ 1.52
CBWD3-213ENST00000618217 TNNI1P19237 187 aa24.53■■□□□ 1.52
CBWD3-213ENST00000618217 PPP3CAQ08209 521 aa24.53■■□□□ 1.52
CBWD3-213ENST00000618217 DUOXA2Q1HG44 320 aa24.53■■□□□ 1.52
CBWD3-213ENST00000618217 HSP90AA4PQ58FG1 418 aa24.53■■□□□ 1.52
CBWD3-213ENST00000618217 SCARA3Q6AZY7 606 aa24.53■■□□□ 1.52
CBWD3-213ENST00000618217 FAM200AQ8TCP9 573 aa24.53■■□□□ 1.52
CBWD3-213ENST00000618217 PAAF1Q9BRP4 392 aa24.53■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms