RNA–Protein interactions for RNA: ENST00000612273.1

COL6A1-207, Transcript of collagen type VI alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL6A1, Length 3,251 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-207ENST00000612273 BANF1O75531 89 aa14.98□□□□□ -0.01
COL6A1-207ENST00000612273 ATP6V1G2O95670 118 aa14.98□□□□□ -0.01
COL6A1-207ENST00000612273 CCNE2O96020 404 aa14.98□□□□□ -0.01
COL6A1-207ENST00000612273 TCF4P15884 667 aa14.98□□□□□ -0.01
COL6A1-207ENST00000612273 TMEM270Q6UE05 265 aa14.98□□□□□ -0.01
COL6A1-207ENST00000612273 SHC3Q92529 594 aa14.98□□□□□ -0.01
COL6A1-207ENST00000612273 NSRP1Q9H0G5 558 aaKnown RBP14.98□□□□□ -0.01
COL6A1-207ENST00000612273 NSFP46459 744 aaKnown RBP14.98□□□□□ -0.01
COL6A1-207ENST00000612273 DYNLT1P63172 113 aa14.98□□□□□ -0.01
COL6A1-207ENST00000612273 ARMC9Q7Z3E5 817 aa14.98□□□□□ -0.01
COL6A1-207ENST00000612273 SLC17A8Q8NDX2 589 aa14.98□□□□□ -0.01
COL6A1-207ENST00000612273 CD101Q93033 1021 aa14.98□□□□□ -0.01
COL6A1-207ENST00000612273 RMDN2Q96LZ7 410 aa14.98□□□□□ -0.01
COL6A1-207ENST00000612273 RANBP17Q9H2T7 1088 aaKnown RBP14.98□□□□□ -0.01
COL6A1-207ENST00000612273 GABBR1Q9UBS5 961 aa14.98□□□□□ -0.01
COL6A1-207ENST00000612273 ATXN2Q99700 1313 aaKnown RBP14.98□□□□□ -0.01
COL6A1-207ENST00000612273 CLNS1AP54105 237 aaKnown RBP14.98□□□□□ -0.01
COL6A1-207ENST00000612273 WNT7BP56706 349 aa14.98□□□□□ -0.01
COL6A1-207ENST00000612273 TAS2R40P59535 323 aa14.98□□□□□ -0.01
COL6A1-207ENST00000612273 RNASELQ05823 741 aaKnown RBP14.98□□□□□ -0.01
COL6A1-207ENST00000612273 DRP2Q13474 957 aa14.98□□□□□ -0.01
COL6A1-207ENST00000612273 NEDD9Q14511 834 aa14.98□□□□□ -0.01
COL6A1-207ENST00000612273 VSTM1Q6UX27 236 aa14.98□□□□□ -0.01
COL6A1-207ENST00000612273 KIFAP3Q92845 792 aa14.98□□□□□ -0.01
COL6A1-207ENST00000612273 ZBTB45Q96K62 511 aaPredicted RBP14.98□□□□□ -0.01
COL6A1-207ENST00000612273 SAE1Q9UBE0 346 aaPredicted RBP14.98□□□□□ -0.01
COL6A1-207ENST00000612273 CEP83Q9Y592 693 aa14.98□□□□□ -0.01
COL6A1-207ENST00000612273 RASA4BC9J798 803 aa14.97□□□□□ -0.01
COL6A1-207ENST00000612273 RASA4O43374 803 aa14.97□□□□□ -0.01
COL6A1-207ENST00000612273 GAS8O95995 478 aa14.97□□□□□ -0.01
COL6A1-207ENST00000612273 HSPA6P17066 643 aa14.97□□□□□ -0.01
COL6A1-207ENST00000612273 DRG2P55039 364 aaKnown RBP14.97□□□□□ -0.01
COL6A1-207ENST00000612273 DNAJC3Q13217 504 aa14.97□□□□□ -0.01
COL6A1-207ENST00000612273 PRAMEF18Q5VWM3 479 aa14.97□□□□□ -0.01
COL6A1-207ENST00000612273 ACAD10Q6JQN1 1059 aa14.97□□□□□ -0.01
COL6A1-207ENST00000612273 SWSAP1Q6NVH7 229 aa14.97□□□□□ -0.01
COL6A1-207ENST00000612273 ANKS1BQ7Z6G8 1248 aa14.97□□□□□ -0.01
COL6A1-207ENST00000612273 SLC9A9Q8IVB4 645 aa14.97□□□□□ -0.01
COL6A1-207ENST00000612273 LARGE2Q8N3Y3 721 aa14.97□□□□□ -0.01
COL6A1-207ENST00000612273 FNBP1Q96RU3 617 aa14.97□□□□□ -0.01
COL6A1-207ENST00000612273 RIT2Q99578 217 aa14.97□□□□□ -0.01
COL6A1-207ENST00000612273 KDM4CQ9H3R0 1056 aa14.97□□□□□ -0.01
COL6A1-207ENST00000612273 AGO4Q9HCK5 861 aaKnown RBP14.97□□□□□ -0.01
COL6A1-207ENST00000612273 ALG13Q9NP73 1137 aaKnown RBP14.97□□□□□ -0.01
COL6A1-207ENST00000612273 SLCO1B3Q9NPD5 702 aa14.97□□□□□ -0.01
COL6A1-207ENST00000612273 NAALADL1Q9UQQ1 740 aa14.97□□□□□ -0.01
COL6A1-207ENST00000612273 TP73O15350 636 aa14.97□□□□□ -0.01
COL6A1-207ENST00000612273 ENTPD3O75355 529 aa14.97□□□□□ -0.01
COL6A1-207ENST00000612273 UPP2O95045 317 aa14.97□□□□□ -0.01
COL6A1-207ENST00000612273 FASTKD3Q14CZ7 662 aaKnown RBP14.97□□□□□ -0.01
COL6A1-207ENST00000612273 MTERF2Q49AM1 385 aa14.97□□□□□ -0.01
COL6A1-207ENST00000612273 IZUMO3Q5VZ72 239 aa14.97□□□□□ -0.01
COL6A1-207ENST00000612273 ANO5Q75V66 913 aa14.97□□□□□ -0.01
COL6A1-207ENST00000612273 KRT27Q7Z3Y8 459 aa14.97□□□□□ -0.01
COL6A1-207ENST00000612273 PIGWQ7Z7B1 504 aa14.97□□□□□ -0.01
COL6A1-207ENST00000612273 WNK4Q96J92 1243 aa14.97□□□□□ -0.01
COL6A1-207ENST00000612273 C12orf65Q9H3J6 166 aaKnown RBP14.97□□□□□ -0.01
COL6A1-207ENST00000612273 C1orf112Q9NSG2 853 aa14.97□□□□□ -0.01
COL6A1-207ENST00000612273 NINJ2Q9NZG7 142 aa14.97□□□□□ -0.01
COL6A1-207ENST00000612273 SEPT9Q9UHD8 586 aaPredicted RBP14.97□□□□□ -0.01
COL6A1-207ENST00000612273 ZNF148Q9UQR1 794 aa14.97□□□□□ -0.01
COL6A1-207ENST00000612273 USP15Q9Y4E8 981 aaPredicted RBP14.97□□□□□ -0.01
COL6A1-207ENST00000612273 ADGRA3Q8IWK6 1321 aa14.97□□□□□ -0.01
COL6A1-207ENST00000612273 SPDYE2BA6NHP3 402 aa14.97□□□□□ -0.01
COL6A1-207ENST00000612273 SPDYE6P0CI01 402 aa14.97□□□□□ -0.01
COL6A1-207ENST00000612273 KRT15P19012 456 aa14.97□□□□□ -0.01
COL6A1-207ENST00000612273 CAP2P40123 477 aa14.97□□□□□ -0.01
COL6A1-207ENST00000612273 ALDH5A1P51649 535 aaPredicted RBP14.97□□□□□ -0.01
COL6A1-207ENST00000612273 ARHGEF16Q5VV41 709 aa14.97□□□□□ -0.01
COL6A1-207ENST00000612273 ZNF449Q6P9G9 518 aa14.97□□□□□ -0.01
COL6A1-207ENST00000612273 TMEM161BQ8NDZ6 487 aa14.97□□□□□ -0.01
COL6A1-207ENST00000612273 SNF8Q96H20 258 aa14.97□□□□□ -0.01
COL6A1-207ENST00000612273 STRA6Q9BX79 667 aa14.97□□□□□ -0.01
COL6A1-207ENST00000612273 FHDC1Q9C0D6 1143 aaPredicted RBP14.97□□□□□ -0.01
COL6A1-207ENST00000612273 VPS37BQ9H9H4 285 aa14.97□□□□□ -0.01
COL6A1-207ENST00000612273 SAYSD1Q9NPB0 183 aa14.97□□□□□ -0.01
COL6A1-207ENST00000612273 TTC4O95801 387 aa14.96□□□□□ -0.01
COL6A1-207ENST00000612273 GZMAP12544 262 aa14.96□□□□□ -0.01
COL6A1-207ENST00000612273 XRCC4Q13426 336 aa14.96□□□□□ -0.01
COL6A1-207ENST00000612273 PLCB4Q15147 1175 aa14.96□□□□□ -0.01
COL6A1-207ENST00000612273 P3H1Q32P28 736 aa14.96□□□□□ -0.01
COL6A1-207ENST00000612273 FITM2Q8N6M3 262 aa14.96□□□□□ -0.01
COL6A1-207ENST00000612273 TMEM143Q96AN5 459 aa14.96□□□□□ -0.01
COL6A1-207ENST00000612273 RUNDC3BQ96NL0 473 aa14.96□□□□□ -0.01
COL6A1-207ENST00000612273 KLF6Q99612 283 aaPredicted RBP14.96□□□□□ -0.01
COL6A1-207ENST00000612273 PLVAPQ9BX97 442 aa14.96□□□□□ -0.01
COL6A1-207ENST00000612273 STMN4Q9H169 189 aaPredicted RBP14.96□□□□□ -0.01
COL6A1-207ENST00000612273 NKIRAS1Q9NYS0 192 aa14.96□□□□□ -0.01
COL6A1-207ENST00000612273 GGA2Q9UJY4 613 aa14.96□□□□□ -0.01
COL6A1-207ENST00000612273 SUN1O94901 812 aa14.96□□□□□ -0.02
COL6A1-207ENST00000612273 KRT16P08779 473 aa14.96□□□□□ -0.02
COL6A1-207ENST00000612273 ZBTB41Q5SVQ8 909 aa14.96□□□□□ -0.02
COL6A1-207ENST00000612273 SLC39A4Q6P5W5 647 aa14.96□□□□□ -0.02
COL6A1-207ENST00000612273 ANKMY2Q8IV38 441 aa14.96□□□□□ -0.02
COL6A1-207ENST00000612273 SYTL5Q8TDW5 730 aaPredicted RBP14.96□□□□□ -0.02
COL6A1-207ENST00000612273 AGAP11Q8TF27 550 aa14.96□□□□□ -0.02
COL6A1-207ENST00000612273 PSPC1Q8WXF1 523 aaKnown RBP14.96□□□□□ -0.02
COL6A1-207ENST00000612273 TMEM237Q96Q45 408 aa14.96□□□□□ -0.02
COL6A1-207ENST00000612273 PCDHB4Q9Y5E5 795 aa14.96□□□□□ -0.02
COL6A1-207ENST00000612273 GOLGA8RI6L899 631 aa14.95□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms