RNA–Protein interactions for RNA: ENST00000606782.1

CTSA-213, Transcript of cathepsin A, humanhuman

TSL 3

Gene CTSA, Length 582 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-213ENST00000606782 GDAQ9Y2T3 454 aa14.64□□□□□ -0.07
CTSA-213ENST00000606782 DOCK8Q8NF50 2099 aa14.63□□□□□ -0.07
CTSA-213ENST00000606782 SMIM28A0A1B0GU29 152 aa14.63□□□□□ -0.07
CTSA-213ENST00000606782 SPDYE4A6NLX3 237 aa14.63□□□□□ -0.07
CTSA-213ENST00000606782 CUTAO60888 179 aa14.63□□□□□ -0.07
CTSA-213ENST00000606782 RFPL2O75678 378 aa14.63□□□□□ -0.07
CTSA-213ENST00000606782 ZMYND10O75800 440 aa14.63□□□□□ -0.07
CTSA-213ENST00000606782 ASGR2P07307 311 aa14.63□□□□□ -0.07
CTSA-213ENST00000606782 MCF2P10911 925 aa14.63□□□□□ -0.07
CTSA-213ENST00000606782 FGFR3P22607 806 aa14.63□□□□□ -0.07
CTSA-213ENST00000606782 AVPR2P30518 371 aa14.63□□□□□ -0.07
CTSA-213ENST00000606782 SLC12A3P55017 1021 aa14.63□□□□□ -0.07
CTSA-213ENST00000606782 UPP1Q16831 310 aa14.63□□□□□ -0.07
CTSA-213ENST00000606782 TMEM119Q4V9L6 283 aa14.63□□□□□ -0.07
CTSA-213ENST00000606782 IER5LQ5T953 404 aa14.63□□□□□ -0.07
CTSA-213ENST00000606782 DCLRE1AQ6PJP8 1040 aa14.63□□□□□ -0.07
CTSA-213ENST00000606782 PDZRN4Q6ZMN7 1036 aaPredicted RBP14.63□□□□□ -0.07
CTSA-213ENST00000606782 PALB2Q86YC2 1186 aa14.63□□□□□ -0.07
CTSA-213ENST00000606782 TMEM161BQ8NDZ6 487 aa14.63□□□□□ -0.07
CTSA-213ENST00000606782 SPATA32Q96LK8 384 aa14.63□□□□□ -0.07
CTSA-213ENST00000606782 UROC1Q96N76 676 aa14.63□□□□□ -0.07
CTSA-213ENST00000606782 CLIC6Q96NY7 704 aa14.63□□□□□ -0.07
CTSA-213ENST00000606782 TARS2Q9BW92 718 aaKnown RBP14.63□□□□□ -0.07
CTSA-213ENST00000606782 PRKD2Q9BZL6 878 aa14.63□□□□□ -0.07
CTSA-213ENST00000606782 EPS15L1Q9UBC2 864 aa14.63□□□□□ -0.07
CTSA-213ENST00000606782 FBXW11Q9UKB1 542 aa14.63□□□□□ -0.07
CTSA-213ENST00000606782 PCDHA7Q9UN72 937 aa14.63□□□□□ -0.07
CTSA-213ENST00000606782 KMT2EQ8IZD2 1858 aa14.63□□□□□ -0.07
CTSA-213ENST00000606782 N4BP1O75113 896 aaKnown RBP14.62□□□□□ -0.07
CTSA-213ENST00000606782 SPATA31D3P0C874 917 aa14.62□□□□□ -0.07
CTSA-213ENST00000606782 PLS3P13797 630 aa14.62□□□□□ -0.07
CTSA-213ENST00000606782 KCNE1P15382 129 aa14.62□□□□□ -0.07
CTSA-213ENST00000606782 RPL17P18621 184 aaKnown RBP14.62□□□□□ -0.07
CTSA-213ENST00000606782 PRSS55Q6UWB4 352 aaPredicted RBP14.62□□□□□ -0.07
CTSA-213ENST00000606782 SPATA31D4Q6ZUB0 917 aa14.62□□□□□ -0.07
CTSA-213ENST00000606782 PRSS33Q8NF86 280 aa14.62□□□□□ -0.07
CTSA-213ENST00000606782 SMG7Q92540 1137 aaKnown RBP14.62□□□□□ -0.07
CTSA-213ENST00000606782 STAMQ92783 540 aa14.62□□□□□ -0.07
CTSA-213ENST00000606782 CCDC94Q9BW85 323 aaPredicted RBP14.62□□□□□ -0.07
CTSA-213ENST00000606782 KCNK12Q9HB15 430 aa14.62□□□□□ -0.07
CTSA-213ENST00000606782 TOPORSQ9NS56 1045 aaPredicted RBP14.62□□□□□ -0.07
CTSA-213ENST00000606782 IGSF9Q9P2J2 1179 aa14.62□□□□□ -0.07
CTSA-213ENST00000606782 VWA8A3KMH1 1905 aa14.62□□□□□ -0.07
CTSA-213ENST00000606782 CLUHO75153 1309 aa14.62□□□□□ -0.07
CTSA-213ENST00000606782 SFI1A8K8P3 1242 aa14.61□□□□□ -0.07
CTSA-213ENST00000606782 SLC16A4O15374 487 aa14.61□□□□□ -0.07
CTSA-213ENST00000606782 B3GAT3O94766 335 aa14.61□□□□□ -0.07
CTSA-213ENST00000606782 PDGFBP01127 241 aaPredicted RBP14.61□□□□□ -0.07
CTSA-213ENST00000606782 POU2F2P09086 479 aa14.61□□□□□ -0.07
CTSA-213ENST00000606782 HNRNPA1P09651 372 aaKnown RBP eCLIP14.61□□□□□ -0.07
CTSA-213ENST00000606782 PLA2G4BP0C869 781 aa14.61□□□□□ -0.07
CTSA-213ENST00000606782 MAPTP10636 758 aaKnown RBP14.61□□□□□ -0.07
CTSA-213ENST00000606782 IGFBP6P24592 240 aaPredicted RBP14.61□□□□□ -0.07
CTSA-213ENST00000606782 HOXA9P31269 272 aa14.61□□□□□ -0.07
CTSA-213ENST00000606782 SMTNP53814 917 aa14.61□□□□□ -0.07
CTSA-213ENST00000606782 YARSP54577 528 aaKnown RBP14.61□□□□□ -0.07
CTSA-213ENST00000606782 VCPP55072 806 aaKnown RBP14.61□□□□□ -0.07
CTSA-213ENST00000606782 TCF15Q12870 199 aa14.61□□□□□ -0.07
CTSA-213ENST00000606782 TDGQ13569 410 aa14.61□□□□□ -0.07
CTSA-213ENST00000606782 RAB33AQ14088 237 aa14.61□□□□□ -0.07
CTSA-213ENST00000606782 PSMD5Q16401 504 aa14.61□□□□□ -0.07
CTSA-213ENST00000606782 ZNF568Q3ZCX4 644 aa14.61□□□□□ -0.07
CTSA-213ENST00000606782 ARSHQ5FYA8 562 aa14.61□□□□□ -0.07
CTSA-213ENST00000606782 ADALQ6DHV7 355 aa14.61□□□□□ -0.07
CTSA-213ENST00000606782 MPZL3Q6UWV2 235 aa14.61□□□□□ -0.07
CTSA-213ENST00000606782 ZPBP2Q6X784 338 aa14.61□□□□□ -0.07
CTSA-213ENST00000606782 RTL10Q7L3V2 364 aa14.61□□□□□ -0.07
CTSA-213ENST00000606782 CEP120Q8N960 986 aa14.61□□□□□ -0.07
CTSA-213ENST00000606782 HASPINQ8TF76 798 aa14.61□□□□□ -0.07
CTSA-213ENST00000606782 NXPE3Q969Y0 559 aa14.61□□□□□ -0.07
CTSA-213ENST00000606782 DDX27Q96GQ7 796 aaKnown RBP14.61□□□□□ -0.07
CTSA-213ENST00000606782 CCSER1Q9C0I3 900 aa14.61□□□□□ -0.07
CTSA-213ENST00000606782 SMOC2Q9H3U7 446 aa14.61□□□□□ -0.07
CTSA-213ENST00000606782 SLC38A7Q9NVC3 462 aa14.61□□□□□ -0.07
CTSA-213ENST00000606782 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP14.61□□□□□ -0.07
CTSA-213ENST00000606782 MTRRQ9UBK8 725 aa14.61□□□□□ -0.07
CTSA-213ENST00000606782 MEFVO15553 781 aaPredicted RBP14.6□□□□□ -0.07
CTSA-213ENST00000606782 TRAPPC3O43617 180 aa14.6□□□□□ -0.07
CTSA-213ENST00000606782 TOM1L1O75674 476 aa14.6□□□□□ -0.07
CTSA-213ENST00000606782 ME1P48163 572 aa14.6□□□□□ -0.07
CTSA-213ENST00000606782 CLCNKBP51801 687 aa14.6□□□□□ -0.07
CTSA-213ENST00000606782 PTPN5P54829 565 aa14.6□□□□□ -0.07
CTSA-213ENST00000606782 SOX4Q06945 474 aaPredicted RBP14.6□□□□□ -0.07
CTSA-213ENST00000606782 UVSSAQ2YD98 709 aa14.6□□□□□ -0.07
CTSA-213ENST00000606782 GLRA4Q5JXX5 417 aa14.6□□□□□ -0.07
CTSA-213ENST00000606782 USP49Q70CQ1 688 aa14.6□□□□□ -0.07
CTSA-213ENST00000606782 CEP57Q86XR8 500 aa14.6□□□□□ -0.07
CTSA-213ENST00000606782 GLYCTKQ8IVS8 523 aa14.6□□□□□ -0.07
CTSA-213ENST00000606782 EPSTI1Q96J88 318 aa14.6□□□□□ -0.07
CTSA-213ENST00000606782 SNX27Q96L92 541 aa14.6□□□□□ -0.07
CTSA-213ENST00000606782 ZMAT2Q96NC0 199 aaKnown RBP14.6□□□□□ -0.07
CTSA-213ENST00000606782 ACAP3Q96P50 834 aa14.6□□□□□ -0.07
CTSA-213ENST00000606782 GDPD2Q9HCC8 539 aa14.6□□□□□ -0.07
CTSA-213ENST00000606782 CNTN3Q9P232 1028 aa14.6□□□□□ -0.07
CTSA-213ENST00000606782 LARSQ9P2J5 1176 aaKnown RBP14.6□□□□□ -0.07
CTSA-213ENST00000606782 DUSP12Q9UNI6 340 aa14.6□□□□□ -0.07
CTSA-213ENST00000606782 BACE2Q9Y5Z0 518 aa14.6□□□□□ -0.07
CTSA-213ENST00000606782 WDFY4Q6ZS81 3184 aa14.6□□□□□ -0.07
CTSA-213ENST00000606782 MYH11P35749 1972 aa14.6□□□□□ -0.07
CTSA-213ENST00000606782 DOCK6Q96HP0 2047 aa14.59□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms