RNA–Protein interactions for RNA: ENST00000604599.1

CDCA3-212, Transcript of cell division cycle associated 3, humanhuman

TSL 2

Gene CDCA3, Length 2,917 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-212ENST00000604599 EURLQ9NYK6 297 aa13.23□□□□□ -0.29
CDCA3-212ENST00000604599 RPL26L1Q9UNX3 145 aaKnown RBP13.23□□□□□ -0.29
CDCA3-212ENST00000604599 DYNC1LI1Q9Y6G9 523 aaKnown RBP13.23□□□□□ -0.29
CDCA3-212ENST00000604599 NAV1Q8NEY1 1877 aa13.23□□□□□ -0.29
CDCA3-212ENST00000604599 WDR91A4D1P6 747 aa13.23□□□□□ -0.29
CDCA3-212ENST00000604599 MAP3K7O43318 606 aa13.23□□□□□ -0.29
CDCA3-212ENST00000604599 CREB3O43889 395 aa13.23□□□□□ -0.29
CDCA3-212ENST00000604599 CYP1A1P04798 512 aaPredicted RBP13.23□□□□□ -0.29
CDCA3-212ENST00000604599 CLK2P49760 499 aaKnown RBP13.23□□□□□ -0.29
CDCA3-212ENST00000604599 PKN2Q16513 984 aaKnown RBP13.23□□□□□ -0.29
CDCA3-212ENST00000604599 CNPY1Q3B7I2 92 aa13.23□□□□□ -0.29
CDCA3-212ENST00000604599 SLC45A4Q5BKX6 768 aa13.23□□□□□ -0.29
CDCA3-212ENST00000604599 SYT2Q8N9I0 419 aaPredicted RBP13.23□□□□□ -0.29
CDCA3-212ENST00000604599 DENND1AQ8TEH3 1009 aa13.23□□□□□ -0.29
CDCA3-212ENST00000604599 OPTNQ96CV9 577 aa13.23□□□□□ -0.29
CDCA3-212ENST00000604599 ZNF184Q99676 751 aaPredicted RBP13.23□□□□□ -0.29
CDCA3-212ENST00000604599 TRAIPQ9BWF2 469 aa13.23□□□□□ -0.29
CDCA3-212ENST00000604599 PSTPIP2Q9H939 334 aa13.23□□□□□ -0.29
CDCA3-212ENST00000604599 ZNF287Q9HBT7 754 aa13.23□□□□□ -0.29
CDCA3-212ENST00000604599 UBE2TQ9NPD8 197 aaPredicted RBP13.23□□□□□ -0.29
CDCA3-212ENST00000604599 ARL8BQ9NVJ2 186 aa13.23□□□□□ -0.29
CDCA3-212ENST00000604599 CHCHD3Q9NX63 227 aaKnown RBP13.23□□□□□ -0.29
CDCA3-212ENST00000604599 LNPEPQ9UIQ6 1025 aa13.23□□□□□ -0.29
CDCA3-212ENST00000604599 SPATA31A1Q5TZJ5 1347 aa13.23□□□□□ -0.29
CDCA3-212ENST00000604599 ZMYM2Q9UBW7 1377 aa13.23□□□□□ -0.29
CDCA3-212ENST00000604599 GYG2O15488 501 aa13.23□□□□□ -0.29
CDCA3-212ENST00000604599 CCDC22O60826 627 aa13.23□□□□□ -0.29
CDCA3-212ENST00000604599 GAS8O95995 478 aa13.23□□□□□ -0.29
CDCA3-212ENST00000604599 RXRBP28702 533 aa13.23□□□□□ -0.29
CDCA3-212ENST00000604599 CRKLP46109 303 aaKnown RBP13.23□□□□□ -0.29
CDCA3-212ENST00000604599 STAT4Q14765 748 aa13.23□□□□□ -0.29
CDCA3-212ENST00000604599 ZRSR2Q15696 482 aaKnown RBP13.23□□□□□ -0.29
CDCA3-212ENST00000604599 HHATQ5VTY9 493 aa13.23□□□□□ -0.29
CDCA3-212ENST00000604599 TTBK2Q6IQ55 1244 aa13.23□□□□□ -0.29
CDCA3-212ENST00000604599 INTS5Q6P9B9 1019 aaKnown RBP13.23□□□□□ -0.29
CDCA3-212ENST00000604599 PRR11Q96HE9 360 aaPredicted RBP13.23□□□□□ -0.29
CDCA3-212ENST00000604599 PCDHB18PQ96TA0 734 aa13.23□□□□□ -0.29
CDCA3-212ENST00000604599 HERPUD2Q9BSE4 406 aa13.23□□□□□ -0.29
CDCA3-212ENST00000604599 JMJD4Q9H9V9 463 aa13.23□□□□□ -0.29
CDCA3-212ENST00000604599 KRT82Q9NSB4 513 aa13.23□□□□□ -0.29
CDCA3-212ENST00000604599 PDP2Q9P2J9 529 aa13.23□□□□□ -0.29
CDCA3-212ENST00000604599 RPS6KL1Q9Y6S9 549 aa13.23□□□□□ -0.29
CDCA3-212ENST00000604599 A0A0G2JND7 137 aa13.22□□□□□ -0.29
CDCA3-212ENST00000604599 GSC2O15499 205 aa13.22□□□□□ -0.29
CDCA3-212ENST00000604599 LYNP07948 512 aa13.22□□□□□ -0.29
CDCA3-212ENST00000604599 MUTP22033 750 aa13.22□□□□□ -0.29
CDCA3-212ENST00000604599 SCNN1BP51168 640 aa13.22□□□□□ -0.29
CDCA3-212ENST00000604599 PTK6Q13882 451 aa13.22□□□□□ -0.29
CDCA3-212ENST00000604599 BMT2Q1RMZ1 405 aa13.22□□□□□ -0.29
CDCA3-212ENST00000604599 WDR72Q3MJ13 1102 aa13.22□□□□□ -0.29
CDCA3-212ENST00000604599 C16orf86Q6ZW13 317 aa13.22□□□□□ -0.29
CDCA3-212ENST00000604599 ADGRF4Q8IZF3 695 aa13.22□□□□□ -0.29
CDCA3-212ENST00000604599 VPS52Q8N1B4 723 aa13.22□□□□□ -0.29
CDCA3-212ENST00000604599 KLHL23Q8NBE8 558 aa13.22□□□□□ -0.29
CDCA3-212ENST00000604599 RFWD2Q8NHY2 731 aa13.22□□□□□ -0.29
CDCA3-212ENST00000604599 BTBD10Q9BSF8 475 aa13.22□□□□□ -0.29
CDCA3-212ENST00000604599 KIAA1586Q9HCI6 787 aa13.22□□□□□ -0.29
CDCA3-212ENST00000604599 CCDC87Q9NVE4 849 aa13.22□□□□□ -0.29
CDCA3-212ENST00000604599 C2CD2LO14523 706 aa13.22□□□□□ -0.29
CDCA3-212ENST00000604599 SPATA31C1P0DKV0 1188 aa13.22□□□□□ -0.29
CDCA3-212ENST00000604599 NT5C2P49902 561 aa13.22□□□□□ -0.29
CDCA3-212ENST00000604599 AP1B1Q10567 949 aa13.22□□□□□ -0.29
CDCA3-212ENST00000604599 SYCP3Q8IZU3 236 aa13.22□□□□□ -0.29
CDCA3-212ENST00000604599 SLC5A5Q92911 643 aa13.22□□□□□ -0.29
CDCA3-212ENST00000604599 ZNF653Q96CK0 615 aa13.22□□□□□ -0.29
CDCA3-212ENST00000604599 TUBGCP5Q96RT8 1024 aa13.22□□□□□ -0.29
CDCA3-212ENST00000604599 SMC6Q96SB8 1091 aa13.22□□□□□ -0.29
CDCA3-212ENST00000604599 FAM192AQ9GZU8 254 aa13.22□□□□□ -0.29
CDCA3-212ENST00000604599 R3HDM2Q9Y2K5 976 aaKnown RBP13.22□□□□□ -0.29
CDCA3-212ENST00000604599 SBDSQ9Y3A5 250 aaKnown RBP eCLIP13.22□□□□□ -0.29
CDCA3-212ENST00000604599 HAUS5O94927 633 aa13.21□□□□□ -0.29
CDCA3-212ENST00000604599 GCAP28676 217 aa13.21□□□□□ -0.29
CDCA3-212ENST00000604599 PPP2R5CQ13362 524 aa13.21□□□□□ -0.29
CDCA3-212ENST00000604599 THOC5Q13769 683 aaKnown RBP13.21□□□□□ -0.29
CDCA3-212ENST00000604599 PRR16Q569H4 304 aa13.21□□□□□ -0.29
CDCA3-212ENST00000604599 FYB2Q5VWT5 728 aa13.21□□□□□ -0.29
CDCA3-212ENST00000604599 ZNF804AQ7Z570 1209 aa13.21□□□□□ -0.29
CDCA3-212ENST00000604599 ARHGEF19Q8IW93 802 aa13.21□□□□□ -0.29
CDCA3-212ENST00000604599 SLCO2A1Q92959 643 aa13.21□□□□□ -0.29
CDCA3-212ENST00000604599 KAT5Q92993 513 aa13.21□□□□□ -0.29
CDCA3-212ENST00000604599 DTNBP1Q96EV8 351 aa13.21□□□□□ -0.29
CDCA3-212ENST00000604599 DYDC2Q96IM9 177 aa13.21□□□□□ -0.29
CDCA3-212ENST00000604599 RBM15Q96T37 977 aaKnown RBP eCLIP13.21□□□□□ -0.29
CDCA3-212ENST00000604599 SYNCQ9H7C4 482 aa13.21□□□□□ -0.29
CDCA3-212ENST00000604599 DDX60LQ5H9U9 1706 aaKnown RBP13.21□□□□□ -0.29
CDCA3-212ENST00000604599 PNMA6FA0A0J9YX94 578 aa13.21□□□□□ -0.3
CDCA3-212ENST00000604599 FSCN2O14926 492 aa13.21□□□□□ -0.3
CDCA3-212ENST00000604599 IZUMO3Q5VZ72 239 aa13.21□□□□□ -0.3
CDCA3-212ENST00000604599 LVRNQ6Q4G3 990 aa13.21□□□□□ -0.3
CDCA3-212ENST00000604599 MYCT1Q8N699 235 aa13.21□□□□□ -0.3
CDCA3-212ENST00000604599 PDCD7Q8N8D1 485 aaKnown RBP13.21□□□□□ -0.3
CDCA3-212ENST00000604599 PSPC1Q8WXF1 523 aaKnown RBP13.21□□□□□ -0.3
CDCA3-212ENST00000604599 ZNF75CPQ92670 426 aaPredicted RBP13.21□□□□□ -0.3
CDCA3-212ENST00000604599 AZIN2Q96A70 460 aa13.21□□□□□ -0.3
CDCA3-212ENST00000604599 SPATA16Q9BXB7 569 aa13.21□□□□□ -0.3
CDCA3-212ENST00000604599 SAR1AQ9NR31 198 aa13.21□□□□□ -0.3
CDCA3-212ENST00000604599 FBXO6Q9NRD1 293 aaPredicted RBP13.21□□□□□ -0.3
CDCA3-212ENST00000604599 STX18Q9P2W9 335 aaKnown RBP13.21□□□□□ -0.3
CDCA3-212ENST00000604599 SORBS3O60504 671 aa13.2□□□□□ -0.3
CDCA3-212ENST00000604599 SGPL1O95470 568 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms