RNA–Protein interactions for RNA: ENST00000597777.1

FARP1-222, Transcript of FERM, ARH/RhoGEF and pleckstrin domain protein 1, human

Gene FARP1, Length 3,841 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FARP1-222	ENST00000597777	ZNF784	Q8NCA9	323 aa	Predicted RBP	10.5	□□□□□ -0.73
FARP1-222	ENST00000597777	SCFD1	Q8WVM8	642 aa		10.5	□□□□□ -0.73
FARP1-222	ENST00000597777	KATNBL1	Q9H079	304 aa		10.5	□□□□□ -0.73
FARP1-222	ENST00000597777	FAM153A	Q9UHL3	310 aa		10.5	□□□□□ -0.73
FARP1-222	ENST00000597777	SNX12	Q9UMY4	172 aa		10.5	□□□□□ -0.73
FARP1-222	ENST00000597777	PCDHB4	Q9Y5E5	795 aa		10.5	□□□□□ -0.73
FARP1-222	ENST00000597777	MAFB	Q9Y5Q3	323 aa	Predicted RBP	10.5	□□□□□ -0.73
FARP1-222	ENST00000597777	PPAN-P2RY11	A0A0B4J1V8	794 aa	Predicted RBP	10.49	□□□□□ -0.73
FARP1-222	ENST00000597777	NEBL	O76041	1014 aa		10.49	□□□□□ -0.73
FARP1-222	ENST00000597777	ZNF131	P52739	623 aa		10.49	□□□□□ -0.73
FARP1-222	ENST00000597777	TMEM62	Q0P6H9	643 aa		10.49	□□□□□ -0.73
FARP1-222	ENST00000597777	PPFIA1	Q13136	1202 aa		10.49	□□□□□ -0.73
FARP1-222	ENST00000597777	WDR59	Q6PJI9	974 aa		10.49	□□□□□ -0.73
FARP1-222	ENST00000597777	PCSK1N	Q9UHG2	260 aa		10.49	□□□□□ -0.73
FARP1-222	ENST00000597777	MTUS1	Q9ULD2	1270 aa		10.49	□□□□□ -0.73
FARP1-222	ENST00000597777	PGRMC1	O00264	195 aa	Known RBP	10.49	□□□□□ -0.73
FARP1-222	ENST00000597777	SART1	O43290	800 aa	Known RBP	10.49	□□□□□ -0.73
FARP1-222	ENST00000597777	RAD51C	O43502	376 aa		10.49	□□□□□ -0.73
FARP1-222	ENST00000597777	ZBTB16	Q05516	673 aa		10.49	□□□□□ -0.73
FARP1-222	ENST00000597777	C10orf76	Q5T2E6	689 aa		10.49	□□□□□ -0.73
FARP1-222	ENST00000597777	LLGL2	Q6P1M3	1020 aa		10.49	□□□□□ -0.73
FARP1-222	ENST00000597777	HNRNPLL	Q8WVV9	542 aa	Known RBP	10.49	□□□□□ -0.73
FARP1-222	ENST00000597777	ATG4A	Q8WYN0	398 aa		10.49	□□□□□ -0.73
FARP1-222	ENST00000597777	OLFML3	Q9NRN5	406 aa		10.49	□□□□□ -0.73
FARP1-222	ENST00000597777	CDKN2AIP	Q9NXV6	580 aa	Predicted RBP	10.49	□□□□□ -0.73
FARP1-222	ENST00000597777	MTRF1L	Q9UGC7	380 aa	Known RBP	10.49	□□□□□ -0.73
FARP1-222	ENST00000597777	ANAPC7	Q9UJX3	599 aa		10.49	□□□□□ -0.73
FARP1-222	ENST00000597777	PCDHA2	Q9Y5H9	948 aa		10.49	□□□□□ -0.73
FARP1-222	ENST00000597777	THAP12	O43422	761 aa		10.49	□□□□□ -0.73
FARP1-222	ENST00000597777	GLI1	P08151	1106 aa		10.49	□□□□□ -0.73
FARP1-222	ENST00000597777	SAT1	P21673	171 aa		10.49	□□□□□ -0.73
FARP1-222	ENST00000597777	PIK3CA	P42336	1068 aa		10.49	□□□□□ -0.73
FARP1-222	ENST00000597777	RARRES1	P49788	294 aa		10.49	□□□□□ -0.73
FARP1-222	ENST00000597777	FAM160B1	Q5W0V3	765 aa		10.49	□□□□□ -0.73
FARP1-222	ENST00000597777	TAPT1	Q6NXT6	567 aa		10.49	□□□□□ -0.73
FARP1-222	ENST00000597777	CASC4	Q6P4E1	433 aa		10.49	□□□□□ -0.73
FARP1-222	ENST00000597777	TMEM270	Q6UE05	265 aa		10.49	□□□□□ -0.73
FARP1-222	ENST00000597777	CCDC170	Q8IYT3	715 aa		10.49	□□□□□ -0.73
FARP1-222	ENST00000597777	UBL4B	Q8N7F7	174 aa		10.49	□□□□□ -0.73
FARP1-222	ENST00000597777	FAM71B	Q8TC56	605 aa		10.49	□□□□□ -0.73
FARP1-222	ENST00000597777	TCP11	Q8WWU5	503 aa		10.49	□□□□□ -0.73
FARP1-222	ENST00000597777	CAPNS2	Q96L46	248 aa		10.49	□□□□□ -0.73
FARP1-222	ENST00000597777	TINF2	Q9BSI4	451 aa		10.49	□□□□□ -0.73
FARP1-222	ENST00000597777	FAM49A	Q9H0Q0	323 aa	Predicted RBP	10.49	□□□□□ -0.73
FARP1-222	ENST00000597777	RASAL2	Q9UJF2	1139 aa		10.49	□□□□□ -0.73
FARP1-222	ENST00000597777	REXO2	Q9Y3B8	237 aa	Known RBP	10.49	□□□□□ -0.73
FARP1-222	ENST00000597777	DAAM1	Q9Y4D1	1078 aa		10.49	□□□□□ -0.73
FARP1-222	ENST00000597777	UBE4B	O95155	1302 aa		10.49	□□□□□ -0.73
FARP1-222	ENST00000597777	RGS2	P41220	211 aa		10.48	□□□□□ -0.73
FARP1-222	ENST00000597777	MAGOH	P61326	146 aa	Known RBP	10.48	□□□□□ -0.73
FARP1-222	ENST00000597777	UGCG	Q16739	394 aa		10.48	□□□□□ -0.73
FARP1-222	ENST00000597777	FBXO16	Q8IX29	292 aa	Predicted RBP	10.48	□□□□□ -0.73
FARP1-222	ENST00000597777	SLC20A1	Q8WUM9	679 aa		10.48	□□□□□ -0.73
FARP1-222	ENST00000597777	ABHD16B	Q9H3Z7	469 aa		10.48	□□□□□ -0.73
FARP1-222	ENST00000597777	ZWILCH	Q9H900	591 aa		10.48	□□□□□ -0.73
FARP1-222	ENST00000597777	C1orf112	Q9NSG2	853 aa		10.48	□□□□□ -0.73
FARP1-222	ENST00000597777	CEP83	Q9Y592	693 aa		10.48	□□□□□ -0.73
FARP1-222	ENST00000597777	LGR5	O75473	907 aa		10.48	□□□□□ -0.73
FARP1-222	ENST00000597777	GGPS1	O95749	300 aa		10.48	□□□□□ -0.73
FARP1-222	ENST00000597777	IGHA2	P01877	340 aa		10.48	□□□□□ -0.73
FARP1-222	ENST00000597777	MAPT	P10636	758 aa	Known RBP	10.48	□□□□□ -0.73
FARP1-222	ENST00000597777	ARHGAP25	P42331	645 aa		10.48	□□□□□ -0.73
FARP1-222	ENST00000597777	SARNP	P82979	210 aa	Known RBP	10.48	□□□□□ -0.73
FARP1-222	ENST00000597777	FBXW10	Q5XX13	1052 aa		10.48	□□□□□ -0.73
FARP1-222	ENST00000597777	SEPT1	Q8WYJ6	367 aa		10.48	□□□□□ -0.73
FARP1-222	ENST00000597777	APBA2	Q99767	749 aa		10.48	□□□□□ -0.73
FARP1-222	ENST00000597777	ZNF302	Q9NR11	478 aa		10.48	□□□□□ -0.73
FARP1-222	ENST00000597777	FBXL5	Q9UKA1	691 aa		10.48	□□□□□ -0.73
FARP1-222	ENST00000597777	RAB21	Q9UL25	225 aa		10.48	□□□□□ -0.73
FARP1-222	ENST00000597777	NOC2L	Q9Y3T9	749 aa	Known RBP	10.48	□□□□□ -0.73
FARP1-222	ENST00000597777	IKBKG	Q9Y6K9	419 aa		10.48	□□□□□ -0.73
FARP1-222	ENST00000597777	MCM3AP	O60318	1980 aa		10.48	□□□□□ -0.73
FARP1-222	ENST00000597777	CASP8AP2	Q9UKL3	1982 aa		10.48	□□□□□ -0.73
FARP1-222	ENST00000597777	EIF3CL	B5ME19	914 aa	Known RBP	10.48	□□□□□ -0.73
FARP1-222	ENST00000597777	MYO1F	O00160	1098 aa		10.48	□□□□□ -0.73
FARP1-222	ENST00000597777	RPS6KA5	O75582	802 aa		10.48	□□□□□ -0.73
FARP1-222	ENST00000597777	GRAP2	O75791	330 aa		10.48	□□□□□ -0.73
FARP1-222	ENST00000597777	STBD1	O95210	358 aa		10.48	□□□□□ -0.73
FARP1-222	ENST00000597777	SNAI1	O95863	264 aa	Predicted RBP	10.48	□□□□□ -0.73
FARP1-222	ENST00000597777	SLC26A2	P50443	739 aa		10.48	□□□□□ -0.73
FARP1-222	ENST00000597777	PDE6C	P51160	858 aa		10.48	□□□□□ -0.73
FARP1-222	ENST00000597777	LAMC2	Q13753	1193 aa		10.48	□□□□□ -0.73
FARP1-222	ENST00000597777	XKR3	Q5GH77	459 aa		10.48	□□□□□ -0.73
FARP1-222	ENST00000597777	SPOPL	Q6IQ16	392 aa		10.48	□□□□□ -0.73
FARP1-222	ENST00000597777	RPAIN	Q86UA6	219 aa		10.48	□□□□□ -0.73
FARP1-222	ENST00000597777	LRRC71	Q8N4P6	559 aa		10.48	□□□□□ -0.73
FARP1-222	ENST00000597777	MSANTD4	Q8NCY6	345 aa		10.48	□□□□□ -0.73
FARP1-222	ENST00000597777	SLC17A8	Q8NDX2	589 aa		10.48	□□□□□ -0.73
FARP1-222	ENST00000597777	FAM167A	Q96KS9	214 aa		10.48	□□□□□ -0.73
FARP1-222	ENST00000597777	EIF3C	Q99613	913 aa	Known RBP	10.48	□□□□□ -0.73
FARP1-222	ENST00000597777	CALN1	Q9BXU9	219 aa		10.48	□□□□□ -0.73
FARP1-222	ENST00000597777	FAM184B	Q9ULE4	1060 aa		10.48	□□□□□ -0.73
FARP1-222	ENST00000597777	FOXN3	O00409	490 aa	Predicted RBP	10.47	□□□□□ -0.73
FARP1-222	ENST00000597777	ARIH2	O95376	493 aa		10.47	□□□□□ -0.73
FARP1-222	ENST00000597777	SESN3	P58005	492 aa		10.47	□□□□□ -0.73
FARP1-222	ENST00000597777	ACTN3	Q08043	901 aa	Predicted RBP	10.47	□□□□□ -0.73
FARP1-222	ENST00000597777	BMT2	Q1RMZ1	405 aa		10.47	□□□□□ -0.73
FARP1-222	ENST00000597777	PLPPR4	Q7Z2D5	763 aa		10.47	□□□□□ -0.73
FARP1-222	ENST00000597777	HAUS6	Q7Z4H7	955 aa		10.47	□□□□□ -0.73
FARP1-222	ENST00000597777	PRUNE1	Q86TP1	453 aa		10.47	□□□□□ -0.73

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