RNA–Protein interactions for RNA: ENST00000596457.1

LIG1-211, Transcript of DNA ligase 1, humanhuman

TSL 5

Gene LIG1, Length 792 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-211ENST00000596457 HSP90AA2PQ14568 343 aaPredicted RBP12.07□□□□□ -0.48
LIG1-211ENST00000596457 BMS1Q14692 1282 aaKnown RBP12.07□□□□□ -0.48
LIG1-211ENST00000596457 KYAT1Q16773 422 aa12.07□□□□□ -0.48
LIG1-211ENST00000596457 ALKAL1Q6UXT8 129 aa12.07□□□□□ -0.48
LIG1-211ENST00000596457 TAS1R1Q7RTX1 841 aa12.07□□□□□ -0.48
LIG1-211ENST00000596457 DDX53Q86TM3 631 aaKnown RBP12.07□□□□□ -0.48
LIG1-211ENST00000596457 TMEM130Q8N3G9 435 aa12.07□□□□□ -0.48
LIG1-211ENST00000596457 ZSWIM2Q8NEG5 633 aa12.07□□□□□ -0.48
LIG1-211ENST00000596457 ENGASEQ8NFI3 743 aa12.07□□□□□ -0.48
LIG1-211ENST00000596457 ZNF507Q8TCN5 953 aa12.07□□□□□ -0.48
LIG1-211ENST00000596457 ERCC4Q92889 916 aaPredicted RBP12.07□□□□□ -0.48
LIG1-211ENST00000596457 KCNN1Q92952 543 aa12.07□□□□□ -0.48
LIG1-211ENST00000596457 C18orf25Q96B23 403 aaPredicted RBP12.07□□□□□ -0.48
LIG1-211ENST00000596457 ZMAT2Q96NC0 199 aaKnown RBP12.07□□□□□ -0.48
LIG1-211ENST00000596457 PPP1R10Q96QC0 940 aaKnown RBP12.07□□□□□ -0.48
LIG1-211ENST00000596457 FAM213AQ9BRX8 229 aa12.07□□□□□ -0.48
LIG1-211ENST00000596457 TLE6Q9H808 572 aa12.07□□□□□ -0.48
LIG1-211ENST00000596457 LZTS1Q9Y250 596 aa12.07□□□□□ -0.48
LIG1-211ENST00000596457 ZMYM2Q9UBW7 1377 aa12.06□□□□□ -0.48
LIG1-211ENST00000596457 CARNS1A5YM72 827 aa12.06□□□□□ -0.48
LIG1-211ENST00000596457 MEFVO15553 781 aaPredicted RBP12.06□□□□□ -0.48
LIG1-211ENST00000596457 KINO60870 393 aaKnown RBP12.06□□□□□ -0.48
LIG1-211ENST00000596457 MYL1P05976 194 aa12.06□□□□□ -0.48
LIG1-211ENST00000596457 BMP1P13497 986 aa12.06□□□□□ -0.48
LIG1-211ENST00000596457 ADSSP30520 456 aa12.06□□□□□ -0.48
LIG1-211ENST00000596457 MRE11P49959 708 aa12.06□□□□□ -0.48
LIG1-211ENST00000596457 CLCNKBP51801 687 aa12.06□□□□□ -0.48
LIG1-211ENST00000596457 SOX4Q06945 474 aaPredicted RBP12.06□□□□□ -0.48
LIG1-211ENST00000596457 EHHADHQ08426 723 aa12.06□□□□□ -0.48
LIG1-211ENST00000596457 STK4Q13043 487 aa12.06□□□□□ -0.48
LIG1-211ENST00000596457 PSMD2Q13200 908 aa12.06□□□□□ -0.48
LIG1-211ENST00000596457 SMC1AQ14683 1233 aaKnown RBP12.06□□□□□ -0.48
LIG1-211ENST00000596457 NAB2Q15742 525 aa12.06□□□□□ -0.48
LIG1-211ENST00000596457 ENOX2Q16206 610 aaKnown RBP12.06□□□□□ -0.48
LIG1-211ENST00000596457 EPM2AIP1Q7L775 607 aaPredicted RBP12.06□□□□□ -0.48
LIG1-211ENST00000596457 RDH13Q8NBN7 331 aa12.06□□□□□ -0.48
LIG1-211ENST00000596457 SCFD1Q8WVM8 642 aa12.06□□□□□ -0.48
LIG1-211ENST00000596457 PPP2R3CQ969Q6 453 aa12.06□□□□□ -0.48
LIG1-211ENST00000596457 CBWD1Q9BRT8 395 aa12.06□□□□□ -0.48
LIG1-211ENST00000596457 SLC38A7Q9NVC3 462 aa12.06□□□□□ -0.48
LIG1-211ENST00000596457 MARCH5Q9NX47 278 aa12.06□□□□□ -0.48
LIG1-211ENST00000596457 CLDND1Q9NY35 253 aa12.06□□□□□ -0.48
LIG1-211ENST00000596457 CNTN3Q9P232 1028 aa12.06□□□□□ -0.48
LIG1-211ENST00000596457 CPSF3Q9UKF6 684 aaKnown RBP12.06□□□□□ -0.48
LIG1-211ENST00000596457 ADAM28Q9UKQ2 775 aa12.06□□□□□ -0.48
LIG1-211ENST00000596457 MAPK8IP1Q9UQF2 711 aa12.06□□□□□ -0.48
LIG1-211ENST00000596457 STYXL1Q9Y6J8 313 aa12.06□□□□□ -0.48
LIG1-211ENST00000596457 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.05□□□□□ -0.48
LIG1-211ENST00000596457 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP12.05□□□□□ -0.48
LIG1-211ENST00000596457 HIDE1A8MVS5 230 aa12.05□□□□□ -0.48
LIG1-211ENST00000596457 FSCN2O14926 492 aa12.05□□□□□ -0.48
LIG1-211ENST00000596457 LINC01565O15544 149 aa12.05□□□□□ -0.48
LIG1-211ENST00000596457 FAM189A1O60320 539 aa12.05□□□□□ -0.48
LIG1-211ENST00000596457 KIF4AO95239 1232 aa12.05□□□□□ -0.48
LIG1-211ENST00000596457 LDHAP00338 332 aaKnown RBP12.05□□□□□ -0.48
LIG1-211ENST00000596457 KCNE1P15382 129 aa12.05□□□□□ -0.48
LIG1-211ENST00000596457 GARTP22102 1010 aa12.05□□□□□ -0.48
LIG1-211ENST00000596457 HOXD13P35453 343 aa12.05□□□□□ -0.48
LIG1-211ENST00000596457 CYP2J2P51589 502 aa12.05□□□□□ -0.48
LIG1-211ENST00000596457 GUCY2FP51841 1108 aa12.05□□□□□ -0.48
LIG1-211ENST00000596457 HYAL1Q12794 435 aa12.05□□□□□ -0.48
LIG1-211ENST00000596457 PUS10Q3MIT2 529 aaKnown RBP12.05□□□□□ -0.48
LIG1-211ENST00000596457 XKR4Q5GH76 650 aa12.05□□□□□ -0.48
LIG1-211ENST00000596457 ISM2Q6H9L7 571 aa12.05□□□□□ -0.48
LIG1-211ENST00000596457 JADE1Q6IE81 842 aa12.05□□□□□ -0.48
LIG1-211ENST00000596457 PDE12Q6L8Q7 609 aaKnown RBP12.05□□□□□ -0.48
LIG1-211ENST00000596457 KIAA1841Q6NSI8 718 aa12.05□□□□□ -0.48
LIG1-211ENST00000596457 LLGL2Q6P1M3 1020 aa12.05□□□□□ -0.48
LIG1-211ENST00000596457 FUT10Q6P4F1 479 aa12.05□□□□□ -0.48
LIG1-211ENST00000596457 CEP57Q86XR8 500 aa12.05□□□□□ -0.48
LIG1-211ENST00000596457 B3GALT6Q96L58 329 aa12.05□□□□□ -0.48
LIG1-211ENST00000596457 VN1R3Q9BXE9 311 aa12.05□□□□□ -0.48
LIG1-211ENST00000596457 GPR62Q9BZJ7 368 aa12.05□□□□□ -0.48
LIG1-211ENST00000596457 ZBP1Q9H171 429 aa12.05□□□□□ -0.48
LIG1-211ENST00000596457 PLEKHA5Q9HAU0 1116 aa12.05□□□□□ -0.48
LIG1-211ENST00000596457 NGRNQ9NPE2 291 aaKnown RBP12.05□□□□□ -0.48
LIG1-211ENST00000596457 TUBGCP4Q9UGJ1 667 aa12.05□□□□□ -0.48
LIG1-211ENST00000596457 HOOK1Q9UJC3 728 aaKnown RBP12.05□□□□□ -0.48
LIG1-211ENST00000596457 CHD9Q3L8U1 2897 aa12.05□□□□□ -0.48
LIG1-211ENST00000596457 UBE4BO95155 1302 aa12.05□□□□□ -0.48
LIG1-211ENST00000596457 TTC26A0AVF1 554 aa12.04□□□□□ -0.48
LIG1-211ENST00000596457 PODXLO00592 558 aa12.04□□□□□ -0.48
LIG1-211ENST00000596457 TGFB1I1O43294 461 aa12.04□□□□□ -0.48
LIG1-211ENST00000596457 B3GAT3O94766 335 aa12.04□□□□□ -0.48
LIG1-211ENST00000596457 SMC2O95347 1197 aa12.04□□□□□ -0.48
LIG1-211ENST00000596457 SOD2P04179 222 aa12.04□□□□□ -0.48
LIG1-211ENST00000596457 IGFBP6P24592 240 aaPredicted RBP12.04□□□□□ -0.48
LIG1-211ENST00000596457 BRCC3P46736 316 aa12.04□□□□□ -0.48
LIG1-211ENST00000596457 UBE2HP62256 183 aa12.04□□□□□ -0.48
LIG1-211ENST00000596457 KNOP1Q1ED39 458 aaKnown RBP12.04□□□□□ -0.48
LIG1-211ENST00000596457 DCLRE1AQ6PJP8 1040 aa12.04□□□□□ -0.48
LIG1-211ENST00000596457 CRELD2Q6UXH1 353 aaPredicted RBP12.04□□□□□ -0.48
LIG1-211ENST00000596457 HS2ST1Q7LGA3 356 aa12.04□□□□□ -0.48
LIG1-211ENST00000596457 GLYCTKQ8IVS8 523 aa12.04□□□□□ -0.48
LIG1-211ENST00000596457 GPD1LQ8N335 351 aa12.04□□□□□ -0.48
LIG1-211ENST00000596457 KIAA0895Q8NCT3 520 aa12.04□□□□□ -0.48
LIG1-211ENST00000596457 SMARCE1Q969G3 411 aa12.04□□□□□ -0.48
LIG1-211ENST00000596457 TIGD1Q96MW7 591 aa12.04□□□□□ -0.48
LIG1-211ENST00000596457 UROC1Q96N76 676 aa12.04□□□□□ -0.48
LIG1-211ENST00000596457 HERC2P3Q9BVR0 1158 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms