RNA–Protein interactions for RNA: ENST00000596348.2

SCN1B-204, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

TSL 5 BASIC

Gene SCN1B, Length 1,176 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-204ENST00000596348 HASPINQ8TF76 798 aa16.32■□□□□ 0.2
SCN1B-204ENST00000596348 SAAL1Q96ER3 474 aa16.32■□□□□ 0.2
SCN1B-204ENST00000596348 COLEC11Q9BWP8 271 aa16.32■□□□□ 0.2
SCN1B-204ENST00000596348 GPR62Q9BZJ7 368 aa16.32■□□□□ 0.2
SCN1B-204ENST00000596348 TMEM206Q9H813 350 aa16.32■□□□□ 0.2
SCN1B-204ENST00000596348 RPF1Q9H9Y2 349 aaKnown RBP16.32■□□□□ 0.2
SCN1B-204ENST00000596348 PLEKHA5Q9HAU0 1116 aa16.32■□□□□ 0.2
SCN1B-204ENST00000596348 C2orf71A6NGG8 1288 aa16.31■□□□□ 0.2
SCN1B-204ENST00000596348 PER2O15055 1255 aa16.31■□□□□ 0.2
SCN1B-204ENST00000596348 TGFB1I1O43294 461 aa16.31■□□□□ 0.2
SCN1B-204ENST00000596348 CTSAP10619 480 aa16.31■□□□□ 0.2
SCN1B-204ENST00000596348 GARTP22102 1010 aa16.31■□□□□ 0.2
SCN1B-204ENST00000596348 NRIP1P48552 1158 aa16.31■□□□□ 0.2
SCN1B-204ENST00000596348 CLCNKBP51801 687 aa16.31■□□□□ 0.2
SCN1B-204ENST00000596348 WNT7BP56706 349 aa16.31■□□□□ 0.2
SCN1B-204ENST00000596348 PNOCQ13519 176 aa16.31■□□□□ 0.2
SCN1B-204ENST00000596348 PDE12Q6L8Q7 609 aaKnown RBP16.31■□□□□ 0.2
SCN1B-204ENST00000596348 FUT10Q6P4F1 479 aa16.31■□□□□ 0.2
SCN1B-204ENST00000596348 CD300LGQ6UXG3 332 aa16.31■□□□□ 0.2
SCN1B-204ENST00000596348 RBM23Q86U06 439 aaKnown RBP16.31■□□□□ 0.2
SCN1B-204ENST00000596348 MRPL43Q8N983 215 aaKnown RBP16.31■□□□□ 0.2
SCN1B-204ENST00000596348 C3orf58Q8NDZ4 430 aa16.31■□□□□ 0.2
SCN1B-204ENST00000596348 PCIF1Q9H4Z3 704 aa16.31■□□□□ 0.2
SCN1B-204ENST00000596348 NGRNQ9NPE2 291 aaKnown RBP16.31■□□□□ 0.2
SCN1B-204ENST00000596348 TUBGCP4Q9UGJ1 667 aa16.31■□□□□ 0.2
SCN1B-204ENST00000596348 ADAM28Q9UKQ2 775 aa16.31■□□□□ 0.2
SCN1B-204ENST00000596348 GOLGA8IPA6NC78 632 aa16.3■□□□□ 0.2
SCN1B-204ENST00000596348 GOLGA8JA6NMD2 632 aa16.3■□□□□ 0.2
SCN1B-204ENST00000596348 LINC01565O15544 149 aa16.3■□□□□ 0.2
SCN1B-204ENST00000596348 RHOBTB3O94955 611 aa16.3■□□□□ 0.2
SCN1B-204ENST00000596348 SOD2P04179 222 aa16.3■□□□□ 0.2
SCN1B-204ENST00000596348 RBM10P98175 930 aaKnown RBP16.3■□□□□ 0.2
SCN1B-204ENST00000596348 TFF2Q03403 129 aa16.3■□□□□ 0.2
SCN1B-204ENST00000596348 PPP2R3AQ06190 1150 aa16.3■□□□□ 0.2
SCN1B-204ENST00000596348 SMC1AQ14683 1233 aaKnown RBP16.3■□□□□ 0.2
SCN1B-204ENST00000596348 PTPN14Q15678 1187 aa16.3■□□□□ 0.2
SCN1B-204ENST00000596348 ZBTB6Q15916 424 aa16.3■□□□□ 0.2
SCN1B-204ENST00000596348 UPP1Q16831 310 aa16.3■□□□□ 0.2
SCN1B-204ENST00000596348 CTC1Q2NKJ3 1217 aa16.3■□□□□ 0.2
SCN1B-204ENST00000596348 KANK3Q6NY19 840 aa16.3■□□□□ 0.2
SCN1B-204ENST00000596348 ARMCX5Q6P1M9 558 aa16.3■□□□□ 0.2
SCN1B-204ENST00000596348 VN1R2Q8NFZ6 395 aa16.3■□□□□ 0.2
SCN1B-204ENST00000596348 KIF12Q96FN5 646 aa16.3■□□□□ 0.2
SCN1B-204ENST00000596348 B3GALT6Q96L58 329 aa16.3■□□□□ 0.2
SCN1B-204ENST00000596348 FAM213AQ9BRX8 229 aa16.3■□□□□ 0.2
SCN1B-204ENST00000596348 HERC2P3Q9BVR0 1158 aa16.3■□□□□ 0.2
SCN1B-204ENST00000596348 IGFLR1Q9H665 355 aa16.3■□□□□ 0.2
SCN1B-204ENST00000596348 TLE6Q9H808 572 aa16.3■□□□□ 0.2
SCN1B-204ENST00000596348 UBE2ZQ9H832 354 aaPredicted RBP16.3■□□□□ 0.2
SCN1B-204ENST00000596348 AGPAT3Q9NRZ7 376 aa16.3■□□□□ 0.2
SCN1B-204ENST00000596348 SLC38A7Q9NVC3 462 aa16.3■□□□□ 0.2
SCN1B-204ENST00000596348 THEGQ9P2T0 379 aa16.3■□□□□ 0.2
SCN1B-204ENST00000596348 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP16.29■□□□□ 0.2
SCN1B-204ENST00000596348 TMEM189-UBE2V1I3L0A0 370 aa16.29■□□□□ 0.2
SCN1B-204ENST00000596348 LILRB3O75022 631 aa16.29■□□□□ 0.2
SCN1B-204ENST00000596348 CXCL14O95715 111 aa16.29■□□□□ 0.2
SCN1B-204ENST00000596348 NFICP08651 508 aa16.29■□□□□ 0.2
SCN1B-204ENST00000596348 GUCY2FP51841 1108 aa16.29■□□□□ 0.2
SCN1B-204ENST00000596348 PSMD2Q13200 908 aa16.29■□□□□ 0.2
SCN1B-204ENST00000596348 DUSP6Q16828 381 aa16.29■□□□□ 0.2
SCN1B-204ENST00000596348 JADE1Q6IE81 842 aa16.29■□□□□ 0.2
SCN1B-204ENST00000596348 CLEC17AQ6ZS10 378 aa16.29■□□□□ 0.2
SCN1B-204ENST00000596348 PHF6Q8IWS0 365 aaKnown RBP eCLIP16.29■□□□□ 0.2
SCN1B-204ENST00000596348 ERCC4Q92889 916 aaPredicted RBP16.29■□□□□ 0.2
SCN1B-204ENST00000596348 HLA-CQ95604 372 aa16.29■□□□□ 0.2
SCN1B-204ENST00000596348 PABPC5Q96DU9 382 aaKnown RBP16.29■□□□□ 0.2
SCN1B-204ENST00000596348 FAM212AQ96EL1 285 aa16.29■□□□□ 0.2
SCN1B-204ENST00000596348 TIGD1Q96MW7 591 aa16.29■□□□□ 0.2
SCN1B-204ENST00000596348 UROC1Q96N76 676 aa16.29■□□□□ 0.2
SCN1B-204ENST00000596348 IRAK3Q9Y616 596 aa16.29■□□□□ 0.2
SCN1B-204ENST00000596348 C5orf42Q9H799 3197 aa16.28■□□□□ 0.2
SCN1B-204ENST00000596348 SF3B1O75533 1304 aaKnown RBP eCLIP16.28■□□□□ 0.28e-6■■■■■ 107
SCN1B-204ENST00000596348 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP16.28■□□□□ 0.2
SCN1B-204ENST00000596348 PODXLO00592 558 aa16.28■□□□□ 0.2
SCN1B-204ENST00000596348 CLIC2O15247 247 aa16.28■□□□□ 0.2
SCN1B-204ENST00000596348 EXTL3O43909 919 aa16.28■□□□□ 0.2
SCN1B-204ENST00000596348 TBX10O75333 385 aa16.28■□□□□ 0.2
SCN1B-204ENST00000596348 TADA2AO75478 443 aa16.28■□□□□ 0.2
SCN1B-204ENST00000596348 B3GAT3O94766 335 aa16.28■□□□□ 0.2
SCN1B-204ENST00000596348 GLP2RO95838 553 aa16.28■□□□□ 0.2
SCN1B-204ENST00000596348 LTBRP36941 435 aa16.28■□□□□ 0.2
SCN1B-204ENST00000596348 DLX2Q07687 328 aaPredicted RBP16.28■□□□□ 0.2
SCN1B-204ENST00000596348 ADAM15Q13444 863 aa16.28■□□□□ 0.2
SCN1B-204ENST00000596348 KCNB1Q14721 858 aa16.28■□□□□ 0.2
SCN1B-204ENST00000596348 KNOP1Q1ED39 458 aaKnown RBP16.28■□□□□ 0.2
SCN1B-204ENST00000596348 KIAA0319Q5VV43 1072 aa16.28■□□□□ 0.2
SCN1B-204ENST00000596348 DCLRE1AQ6PJP8 1040 aa16.28■□□□□ 0.2
SCN1B-204ENST00000596348 BRSK2Q8IWQ3 736 aa16.28■□□□□ 0.2
SCN1B-204ENST00000596348 EFCAB13Q8IY85 973 aa16.28■□□□□ 0.2
SCN1B-204ENST00000596348 EFHBQ8N7U6 833 aa16.28■□□□□ 0.2
SCN1B-204ENST00000596348 PPP2R3CQ969Q6 453 aa16.28■□□□□ 0.2
SCN1B-204ENST00000596348 CHST7Q9NS84 486 aa16.28■□□□□ 0.2
SCN1B-204ENST00000596348 CLDND1Q9NY35 253 aa16.28■□□□□ 0.2
SCN1B-204ENST00000596348 HSPBP1Q9NZL4 362 aa16.28■□□□□ 0.2
SCN1B-204ENST00000596348 STK39Q9UEW8 545 aa16.28■□□□□ 0.2
SCN1B-204ENST00000596348 COG5Q9UP83 839 aa16.28■□□□□ 0.2
SCN1B-204ENST00000596348 SCN1AP35498 2009 aa16.28■□□□□ 0.2
SCN1B-204ENST00000596348 BDP1A6H8Y1 2624 aa16.27■□□□□ 0.2
SCN1B-204ENST00000596348 I3L4J1 428 aa16.27■□□□□ 0.2
SCN1B-204ENST00000596348 C2CD2LO14523 706 aa16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms