RNA–Protein interactions for RNA: ENST00000595726.1

SHKBP1-208, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 684 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-208ENST00000595726 ZSWIM3Q96MP5 696 aa15.26■□□□□ 0.03
SHKBP1-208ENST00000595726 ZFP14Q9HCL3 533 aa15.26■□□□□ 0.03
SHKBP1-208ENST00000595726 LOC400499M0QZD8 3231 aa15.26■□□□□ 0.03
SHKBP1-208ENST00000595726 ASAP2O43150 1006 aa15.25■□□□□ 0.03
SHKBP1-208ENST00000595726 PRPF3O43395 683 aaKnown RBP15.25■□□□□ 0.03
SHKBP1-208ENST00000595726 CNR2P34972 360 aa15.25■□□□□ 0.03
SHKBP1-208ENST00000595726 VIPR2P41587 438 aa15.25■□□□□ 0.03
SHKBP1-208ENST00000595726 MBTD1Q05BQ5 628 aa15.25■□□□□ 0.03
SHKBP1-208ENST00000595726 WDR44Q5JSH3 913 aa15.25■□□□□ 0.03
SHKBP1-208ENST00000595726 PSAPL1Q6NUJ1 521 aa15.25■□□□□ 0.03
SHKBP1-208ENST00000595726 VITQ6UXI7 678 aa15.25■□□□□ 0.03
SHKBP1-208ENST00000595726 HACE1Q8IYU2 909 aa15.25■□□□□ 0.03
SHKBP1-208ENST00000595726 SPEM1Q8N4L4 309 aa15.25■□□□□ 0.03
SHKBP1-208ENST00000595726 IRF7Q92985 503 aa15.25■□□□□ 0.03
SHKBP1-208ENST00000595726 CORO1BQ9BR76 489 aa15.25■□□□□ 0.03
SHKBP1-208ENST00000595726 IER2Q9BTL4 223 aa15.25■□□□□ 0.03
SHKBP1-208ENST00000595726 CDY1Q9Y6F8 540 aa15.25■□□□□ 0.03
SHKBP1-208ENST00000595726 FREM2Q5SZK8 3169 aa15.24■□□□□ 0.03
SHKBP1-208ENST00000595726 CYP3A7-CYP3A51PA0A087WV96 503 aa15.24■□□□□ 0.03
SHKBP1-208ENST00000595726 PTGESO14684 152 aa15.24■□□□□ 0.03
SHKBP1-208ENST00000595726 GIPC1O14908 333 aa15.24■□□□□ 0.03
SHKBP1-208ENST00000595726 FOXD2O60548 495 aaPredicted RBP15.24■□□□□ 0.03
SHKBP1-208ENST00000595726 TOP3BO95985 862 aaKnown RBP15.24■□□□□ 0.03
SHKBP1-208ENST00000595726 PTPN2P17706 415 aa15.24■□□□□ 0.03
SHKBP1-208ENST00000595726 CYP3A7P24462 503 aa15.24■□□□□ 0.03
SHKBP1-208ENST00000595726 CCR2P41597 374 aa15.24■□□□□ 0.03
SHKBP1-208ENST00000595726 XKR9Q5GH70 373 aa15.24■□□□□ 0.03
SHKBP1-208ENST00000595726 PRSS36Q5K4E3 855 aa15.24■□□□□ 0.03
SHKBP1-208ENST00000595726 ASAP3Q8TDY4 903 aa15.24■□□□□ 0.03
SHKBP1-208ENST00000595726 TCP11Q8WWU5 503 aa15.24■□□□□ 0.03
SHKBP1-208ENST00000595726 ASB16Q96NS5 453 aa15.24■□□□□ 0.03
SHKBP1-208ENST00000595726 LSM14BQ9BX40 385 aaKnown RBP15.24■□□□□ 0.03
SHKBP1-208ENST00000595726 SLKQ9H2G2 1235 aaPredicted RBP15.24■□□□□ 0.03
SHKBP1-208ENST00000595726 XPNPEP1Q9NQW7 623 aa15.24■□□□□ 0.03
SHKBP1-208ENST00000595726 RGL1Q9NZL6 768 aa15.24■□□□□ 0.03
SHKBP1-208ENST00000595726 LAMA5O15230 3695 aa15.23■□□□□ 0.03
SHKBP1-208ENST00000595726 NCANO14594 1321 aa15.23■□□□□ 0.03
SHKBP1-208ENST00000595726 ZNF806P0C7X5 589 aa15.23■□□□□ 0.03
SHKBP1-208ENST00000595726 YWHABP31946 246 aaKnown RBP15.23■□□□□ 0.03
SHKBP1-208ENST00000595726 SOX9P48436 509 aa15.23■□□□□ 0.03
SHKBP1-208ENST00000595726 PXNP49023 591 aaPredicted RBP15.23■□□□□ 0.03
SHKBP1-208ENST00000595726 PTGDRQ13258 359 aa15.23■□□□□ 0.03
SHKBP1-208ENST00000595726 CAPSQ13938 189 aa15.23■□□□□ 0.03
SHKBP1-208ENST00000595726 SLC27A1Q6PCB7 646 aa15.23■□□□□ 0.03
SHKBP1-208ENST00000595726 RUFY3Q7L099 469 aa15.23■□□□□ 0.03
SHKBP1-208ENST00000595726 EXOC8Q8IYI6 725 aa15.23■□□□□ 0.03
SHKBP1-208ENST00000595726 KDF1Q8NAX2 398 aaPredicted RBP15.23■□□□□ 0.03
SHKBP1-208ENST00000595726 ZSWIM6Q9HCJ5 1215 aa15.23■□□□□ 0.03
SHKBP1-208ENST00000595726 MTRRQ9UBK8 725 aa15.23■□□□□ 0.03
SHKBP1-208ENST00000595726 VAV3Q9UKW4 847 aa15.23■□□□□ 0.03
SHKBP1-208ENST00000595726 A0A1B0GUA9 196 aa15.22■□□□□ 0.03
SHKBP1-208ENST00000595726 I3L4J1 428 aa15.22■□□□□ 0.03
SHKBP1-208ENST00000595726 SLC37A4O43826 429 aa15.22■□□□□ 0.03
SHKBP1-208ENST00000595726 P4HBP07237 508 aaKnown RBP15.22■□□□□ 0.03
SHKBP1-208ENST00000595726 GJA1P17302 382 aa15.22■□□□□ 0.03
SHKBP1-208ENST00000595726 PSMC3P17980 439 aa15.22■□□□□ 0.03
SHKBP1-208ENST00000595726 FGFR3P22607 806 aa15.22■□□□□ 0.03
SHKBP1-208ENST00000595726 NLRP5P59047 1200 aa15.22■□□□□ 0.03
SHKBP1-208ENST00000595726 FOXC1Q12948 553 aa15.22■□□□□ 0.03
SHKBP1-208ENST00000595726 TOB2Q14106 344 aaPredicted RBP15.22■□□□□ 0.03
SHKBP1-208ENST00000595726 NAB2Q15742 525 aa15.22■□□□□ 0.03
SHKBP1-208ENST00000595726 GPIHBP1Q8IV16 184 aa15.22■□□□□ 0.03
SHKBP1-208ENST00000595726 HS6ST3Q8IZP7 471 aa15.22■□□□□ 0.03
SHKBP1-208ENST00000595726 TTC8Q8TAM2 541 aa15.22■□□□□ 0.03
SHKBP1-208ENST00000595726 MTRQ99707 1265 aa15.22■□□□□ 0.03
SHKBP1-208ENST00000595726 SLC26A6Q9BXS9 759 aa15.22■□□□□ 0.03
SHKBP1-208ENST00000595726 TM6SF1Q9BZW5 370 aa15.22■□□□□ 0.03
SHKBP1-208ENST00000595726 TRPV5Q9NQA5 729 aa15.22■□□□□ 0.03
SHKBP1-208ENST00000595726 AVENQ9NQS1 362 aaPredicted RBP15.22■□□□□ 0.03
SHKBP1-208ENST00000595726 DDX25Q9UHL0 483 aaKnown RBP15.22■□□□□ 0.03
SHKBP1-208ENST00000595726 TICRRQ7Z2Z1 1910 aa15.21■□□□□ 0.03
SHKBP1-208ENST00000595726 CCDC196A0A1B0GTZ2 297 aa15.21■□□□□ 0.03
SHKBP1-208ENST00000595726 WDR27A2RRH5 827 aa15.21■□□□□ 0.03
SHKBP1-208ENST00000595726 SRRM3A6NNA2 597 aaPredicted RBP15.21■□□□□ 0.03
SHKBP1-208ENST00000595726 TTLL13PA6NNM8 815 aa15.21■□□□□ 0.03
SHKBP1-208ENST00000595726 SLC38A8A6NNN8 435 aa15.21■□□□□ 0.03
SHKBP1-208ENST00000595726 ZNF263O14978 683 aa15.21■□□□□ 0.03
SHKBP1-208ENST00000595726 LRG1P02750 347 aa15.21■□□□□ 0.03
SHKBP1-208ENST00000595726 THP07101 528 aa15.21■□□□□ 0.03
SHKBP1-208ENST00000595726 TKTP29401 623 aaKnown RBP15.21■□□□□ 0.03
SHKBP1-208ENST00000595726 EVCP57679 992 aa15.21■□□□□ 0.03
SHKBP1-208ENST00000595726 AKAP17AQ02040 695 aaKnown RBP15.21■□□□□ 0.03
SHKBP1-208ENST00000595726 CTTNQ14247 550 aaKnown RBP15.21■□□□□ 0.03
SHKBP1-208ENST00000595726 MXD4Q14582 209 aaPredicted RBP15.21■□□□□ 0.03
SHKBP1-208ENST00000595726 PCBP1Q15365 356 aaKnown RBP eCLIP15.21■□□□□ 0.03
SHKBP1-208ENST00000595726 TCEAL6Q6IPX3 200 aa15.21■□□□□ 0.03
SHKBP1-208ENST00000595726 PDXDC1Q6P996 788 aa15.21■□□□□ 0.03
SHKBP1-208ENST00000595726 TXNDC11Q6PKC3 985 aa15.21■□□□□ 0.03
SHKBP1-208ENST00000595726 LRSAM1Q6UWE0 723 aa15.21■□□□□ 0.03
SHKBP1-208ENST00000595726 PDZRN4Q6ZMN7 1036 aaPredicted RBP15.21■□□□□ 0.03
SHKBP1-208ENST00000595726 KBTBD6Q86V97 674 aa15.21■□□□□ 0.03
SHKBP1-208ENST00000595726 IFNLR1Q8IU57 520 aaPredicted RBP15.21■□□□□ 0.03
SHKBP1-208ENST00000595726 SMARCD2Q92925 531 aa15.21■□□□□ 0.03
SHKBP1-208ENST00000595726 TCEAL3Q969E4 200 aa15.21■□□□□ 0.03
SHKBP1-208ENST00000595726 DYDC2Q96IM9 177 aa15.21■□□□□ 0.03
SHKBP1-208ENST00000595726 LXNQ9BS40 222 aa15.21■□□□□ 0.03
SHKBP1-208ENST00000595726 TMEM121BQ9BXQ6 578 aaPredicted RBP15.21■□□□□ 0.03
SHKBP1-208ENST00000595726 SNTG2Q9NY99 539 aa15.21■□□□□ 0.03
SHKBP1-208ENST00000595726 USP20Q9Y2K6 914 aa15.21■□□□□ 0.03
SHKBP1-208ENST00000595726 CYP46A1Q9Y6A2 500 aa15.21■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms